Gene annotation
Transcriptome id Sobic.001G038500.1
Synonym Sb01g003540, ANT1
Functional annotation ANT1, putative, expressed
UniProt C5WV51
Pfam PF01490
Panther DB PTHR22950 PTHR22950:SF325
NCBI CDD KOG1304; Amino acid transporters
KEGG Orthology K14209; SLC36A, solute carrier family 36 (proton-coupled amino acid transporter)
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G11900 : aromatic and neutral transporter 1
RAP-DB (Rice) LOC_Os03g60260.1 : ANT1, putative, expressed
MaizeGDB (Corn) Zm00025a016452
Brachypodium PNT73906 , KQK12482
Barley HORVU5Hr1G112960.4 , HORVU5Hr1G112960.6 , HORVU5Hr1G112960.1 , HORVU5Hr1G112960.2 , HORVU5Hr1G112960.3 , HORVU5Hr1G112210.10 , HORVU5Hr1G112210.11 , HORVU5Hr1G112210.12 , HORVU5Hr1G112210.13 , HORVU5Hr1G112210.14 , HORVU5Hr1G112210.15 , HORVU5Hr1G112210.16 , HORVU5Hr1G112210.2 , HORVU5Hr1G112210.3 , HORVU5Hr1G112210.1 , HORVU5Hr1G112210.6 , HORVU5Hr1G112210.7 , HORVU5Hr1G112210.4 , HORVU5Hr1G112210.5 , HORVU5Hr1G112210.8 , HORVU5Hr1G112210.9
Wheat TraesCS5D02G485100 , TraesCS5B02G485400 , TraesCS5A02G472500 , TraesCS5D02G485300 , TraesCS5A02G472600 , TraesCS5B02G485500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G092100 PCF-like (ClassI) Subclade 5 TCP(PubMedID : 21444336)@"TCP is actually a family of transcription factors named after: teosinte branched 1 (tb1, Zea mays (Maize)), cycloidea (cyc) (Antirrhinum majus) (Garden snapdragon) and PCF in rice (Oryza sativa)."(PubMedID : 27917941)@"plant-specific TCP family of transcription factors, in particular, have been shown to play key roles in evolution of plant form and structure (putative)"(PubMedID : 28383054)@TCP-domain protein, putative, expressed -
2 Sobic.007G159800 DNA binding protein, putative, expressed -
3 Sobic.006G204200 putrescine-binding periplasmic protein-related, putative, expressed -
4 Sobic.002G246600 helix-loop-helix DNA-binding domain containing protein, expressed -
5 Sobic.001G361900 ATPase, putative, expressed K08900: mitochondrial chaperone BCS1
6 Sobic.003G057800 rho termination factor, N-terminal domain containing protein, expressed -
7 Sobic.003G357500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@laccase precursor protein, putative, expressed K05909: laccase
8 Sobic.003G357600 laccase precursor protein, putative, expressed K05909: laccase
9 Sobic.008G163700 helix-loop-helix DNA-binding domain containing protein, expressed K16189: phytochrome-interacting factor 4
10 Sobic.003G178700 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
11 Sobic.002G376800 EF hand family protein, putative -
12 Sobic.002G226000 leucine-rich repeat family protein, putative, expressed -
13 Sobic.008G105500 ureide permease, putative, expressed -
14 Sobic.009G002500 polygalacturonase inhibitor precursor, putative, expressed -
15 Sobic.001G078900 MYB(PubMedID : 28944535)@MYB family transcription factor, putative, expressed -
16 Sobic.003G115700 lipase, putative, expressed -
17 Sobic.009G180200 SNF1-related protein kinase regulatory subunit beta-1, putative, expressed K07199: 5'-AMP-activated protein kinase, regulatory beta subunit
18 Sobic.001G084600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
19 Sobic.004G122500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dynein light chain type 1 domain containing protein, expressed K10418: dynein light chain LC8-type
20 Sobic.001G433200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@beta-galactosidase precursor, putative, expressed -


Gene co-expression network
sample Sobic001G038500 Sobic001G038500 Sobic010G092100 Sobic010G092100 Sobic001G038500--Sobic010G092100 Sobic007G159800 Sobic007G159800 Sobic001G038500--Sobic007G159800 Sobic006G204200 Sobic006G204200 Sobic001G038500--Sobic006G204200 Sobic002G246600 Sobic002G246600 Sobic001G038500--Sobic002G246600 Sobic001G361900 Sobic001G361900 Sobic001G038500--Sobic001G361900 Sobic003G057800 Sobic003G057800 Sobic001G038500--Sobic003G057800 Sobic003G357500 Sobic003G357500 Sobic001G038500--Sobic003G357500 Sobic003G357600 Sobic003G357600 Sobic001G038500--Sobic003G357600 Sobic008G163700 Sobic008G163700 Sobic001G038500--Sobic008G163700 Sobic010G092100--Sobic001G038500 Sobic010G092100--Sobic001G361900 Sobic009G010700 Sobic009G010700 Sobic010G092100--Sobic009G010700 Sobic010G092100--Sobic007G159800 Sobic003G178700 Sobic003G178700 Sobic010G092100--Sobic003G178700 Sobic002G376700 Sobic002G376700 Sobic010G092100--Sobic002G376700 Sobic010G092100--Sobic006G204200 Sobic001G084600 Sobic001G084600 Sobic010G092100--Sobic001G084600 Sobic010G092100--Sobic008G163700 Sobic007G159800--Sobic001G038500 Sobic002G376800 Sobic002G376800 Sobic007G159800--Sobic002G376800 Sobic007G159800--Sobic003G057800 Sobic009G230400 Sobic009G230400 Sobic007G159800--Sobic009G230400 Sobic007G159800--Sobic006G204200 Sobic008G105500 Sobic008G105500 Sobic007G159800--Sobic008G105500 Sobic001G056300 Sobic001G056300 Sobic007G159800--Sobic001G056300 Sobic007G159800--Sobic008G163700 Sobic007G159800--Sobic010G092100 Sobic006G204200--Sobic002G376800 Sobic006G204200--Sobic003G057800 Sobic001G479500 Sobic001G479500 Sobic006G204200--Sobic001G479500 Sobic004G016500 Sobic004G016500 Sobic006G204200--Sobic004G016500 Sobic004G315800 Sobic004G315800 Sobic006G204200--Sobic004G315800 Sobic002G330400 Sobic002G330400 Sobic006G204200--Sobic002G330400 Sobic008G161401 Sobic008G161401 Sobic006G204200--Sobic008G161401 Sobic004G020401 Sobic004G020401 Sobic006G204200--Sobic004G020401 Sobic010G248200 Sobic010G248200 Sobic006G204200--Sobic010G248200 Sobic003G296600 Sobic003G296600 Sobic002G246600--Sobic003G296600 Sobic001G032100 Sobic001G032100 Sobic002G246600--Sobic001G032100 Sobic001G247400 Sobic001G247400 Sobic002G246600--Sobic001G247400 Sobic001G225100 Sobic001G225100 Sobic002G246600--Sobic001G225100 Sobic003G324000 Sobic003G324000 Sobic002G246600--Sobic003G324000 Sobic002G246600--Sobic001G038500 Sobic004G221900 Sobic004G221900 Sobic002G246600--Sobic004G221900 Sobic003G293900 Sobic003G293900 Sobic002G246600--Sobic003G293900 Sobic002G226000 Sobic002G226000 Sobic002G246600--Sobic002G226000 Sobic001G361900--Sobic010G092100 Sobic001G361900--Sobic001G038500 Sobic001G361900--Sobic007G159800 Sobic001G361900--Sobic006G204200 Sobic002G104000 Sobic002G104000 Sobic001G361900--Sobic002G104000 Sobic001G361900--Sobic008G163700 Sobic001G217700 Sobic001G217700 Sobic001G361900--Sobic001G217700 Sobic005G036700 Sobic005G036700 Sobic001G361900--Sobic005G036700 Sobic001G361900--Sobic004G315800 Sobic003G057800--Sobic001G479500 Sobic003G057800--Sobic003G357500 Sobic003G057800--Sobic010G248200 Sobic003G057800--Sobic008G161401 Sobic004G212800 Sobic004G212800 Sobic003G057800--Sobic004G212800 Sobic005G130200 Sobic005G130200 Sobic003G057800--Sobic005G130200 Sobic007G073400 Sobic007G073400 Sobic003G057800--Sobic007G073400 Sobic003G057800--Sobic004G016500 Sobic001G046600 Sobic001G046600 Sobic003G057800--Sobic001G046600 Sobic003G357500--Sobic003G357600 Sobic003G357500--Sobic003G057800 Sobic003G357500--Sobic008G161401 Sobic003G357500--Sobic007G073400 Sobic003G357500--Sobic010G248200 Sobic003G357500--Sobic004G212800 Sobic003G357500--Sobic005G130200 Sobic006G196000 Sobic006G196000 Sobic003G357500--Sobic006G196000 Sobic003G357500--Sobic001G479500 Sobic003G357600--Sobic003G357500 Sobic003G357600--Sobic003G057800 Sobic003G357600--Sobic007G073400 Sobic003G357600--Sobic010G248200 Sobic003G357600--Sobic004G020401 Sobic002G150766 Sobic002G150766 Sobic003G357600--Sobic002G150766 Sobic004G143700 Sobic004G143700 Sobic003G357600--Sobic004G143700 Sobic007G023700 Sobic007G023700 Sobic003G357600--Sobic007G023700 Sobic001G272000 Sobic001G272000 Sobic003G357600--Sobic001G272000 Sobic001G017900 Sobic001G017900 Sobic008G163700--Sobic001G017900 Sobic002G285300 Sobic002G285300 Sobic008G163700--Sobic002G285300 Sobic008G163700--Sobic007G159800 Sobic007G156101 Sobic007G156101 Sobic008G163700--Sobic007G156101 Sobic008G163700--Sobic001G038500 Sobic009G255300 Sobic009G255300 Sobic008G163700--Sobic009G255300 Sobic008G163700--Sobic010G092100 Sobic007G017400 Sobic007G017400 Sobic008G163700--Sobic007G017400 Sobic008G163700--Sobic001G361900
Octagon: transcription factors


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