Gene annotation
Transcriptome id Sobic.006G067500.1
Synonym Sb06g015410
Functional annotation Ser/Thr protein phosphatase family protein, putative, expressed
UniProt C5YFT1
Pfam PF00149
Panther DB PTHR24032 PTHR24032:SF1
NCBI CDD KOG0374; Serine/threonine specific protein phosphatase PP1, catalytic subunit
KEGG Orthology -
Gene Ontology GO:0016787; hydrolase activity


Orthologs (automatic annotation)
TAIR AT3G09970 : Calcineurin-like metallo-phosphoesterase superfamily protein
RAP-DB (Rice) LOC_Os04g33470.1 : Ser/Thr protein phosphatase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a055990
Brachypodium KQJ82481
Barley HORVU2Hr1G072530.1 , HORVU2Hr1G072530.3 , HORVU2Hr1G072530.2
Wheat TraesCS2B02G309600 , TraesCS2A02G293300 , TraesCS2D02G290900 , TraesCS2D02G290900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G168800 BTBN7 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed -
2 Sobic.003G412900 NAD(P)H dehydrogenase 18(PubMedID : 26465154)@Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@expressed protein -
3 Sobic.008G188600 glyoxalase family protein, putative, expressed -
4 Sobic.006G067400 Ser/Thr protein phosphatase family protein, putative, expressed -
5 Sobic.009G059300 haloacid dehalogenase-like hydrolase family protein, putative, expressed -
6 Sobic.003G371600 proton-dependent oligopeptide transport, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
7 Sobic.002G102200 acetyltransferase, GNAT family, putative, expressed -
8 Sobic.003G387100 membrane-associated 30 kDa protein, chloroplast precursor, putative, expressed K03969: phage shock protein A
9 Sobic.006G050400 expressed protein -
10 Sobic.001G391900 nifU, putative, expressed -
11 Sobic.001G314200 expressed protein -
12 Sobic.006G093900 enzyme of the cupin superfamily protein, putative, expressed K06995: uncharacterized protein
13 Sobic.008G171300 methyltransferase domain containing protein, putative, expressed K12502: VTE3, MPBQ/MSBQ methyltransferase
14 Sobic.001G291900 expressed protein -
15 Sobic.001G295300 peptide methionine sulfoxide reductase, putative, expressed K07304: peptide-methionine (S)-S-oxide reductase
16 Sobic.001G035800 heavy metal-associated domain containing protein, expressed -
17 Sobic.006G101500 expressed protein -
18 Sobic.006G188000 expressed protein -
19 Sobic.003G022300 SOUL heme-binding protein, putative, expressed -
20 Sobic.009G155600 60S acidic ribosomal protein, putative, expressed K02943: RP-LP2, large subunit ribosomal protein LP2


Gene co-expression network
sample Sobic006G067500 Sobic006G067500 Sobic001G168800 Sobic001G168800 Sobic006G067500--Sobic001G168800 Sobic003G412900 Sobic003G412900 Sobic006G067500--Sobic003G412900 Sobic008G188600 Sobic008G188600 Sobic006G067500--Sobic008G188600 Sobic006G067400 Sobic006G067400 Sobic006G067500--Sobic006G067400 Sobic009G059300 Sobic009G059300 Sobic006G067500--Sobic009G059300 Sobic003G371600 Sobic003G371600 Sobic006G067500--Sobic003G371600 Sobic002G102200 Sobic002G102200 Sobic006G067500--Sobic002G102200 Sobic003G387100 Sobic003G387100 Sobic006G067500--Sobic003G387100 Sobic006G050400 Sobic006G050400 Sobic006G067500--Sobic006G050400 Sobic001G168800--Sobic003G412900 Sobic003G439000 Sobic003G439000 Sobic001G168800--Sobic003G439000 Sobic001G134700 Sobic001G134700 Sobic001G168800--Sobic001G134700 Sobic001G168800--Sobic003G387100 Sobic004G227200 Sobic004G227200 Sobic001G168800--Sobic004G227200 Sobic003G378600 Sobic003G378600 Sobic001G168800--Sobic003G378600 Sobic006G101500 Sobic006G101500 Sobic001G168800--Sobic006G101500 Sobic001G469900 Sobic001G469900 Sobic001G168800--Sobic001G469900 Sobic007G085800 Sobic007G085800 Sobic001G168800--Sobic007G085800 Sobic001G069000 Sobic001G069000 Sobic003G412900--Sobic001G069000 Sobic003G412900--Sobic003G387100 Sobic001G314200 Sobic001G314200 Sobic003G412900--Sobic001G314200 Sobic008G102000 Sobic008G102000 Sobic003G412900--Sobic008G102000 Sobic006G093900 Sobic006G093900 Sobic003G412900--Sobic006G093900 Sobic003G412900--Sobic009G059300 Sobic003G412900--Sobic001G168800 Sobic003G412900--Sobic006G101500 Sobic009G030900 Sobic009G030900 Sobic003G412900--Sobic009G030900 Sobic008G188600--Sobic003G387100 Sobic009G043000 Sobic009G043000 Sobic008G188600--Sobic009G043000 Sobic008G188600--Sobic008G102000 Sobic006G207800 Sobic006G207800 Sobic008G188600--Sobic006G207800 Sobic008G188600--Sobic009G059300 Sobic008G188600--Sobic006G067400 Sobic010G201700 Sobic010G201700 Sobic008G188600--Sobic010G201700 Sobic010G153900 Sobic010G153900 Sobic008G188600--Sobic010G153900 Sobic007G225500 Sobic007G225500 Sobic008G188600--Sobic007G225500 Sobic006G067400--Sobic008G188600 Sobic008G171300 Sobic008G171300 Sobic006G067400--Sobic008G171300 Sobic006G067400--Sobic009G059300 Sobic006G067400--Sobic009G043000 Sobic006G067400--Sobic001G314200 Sobic007G052400 Sobic007G052400 Sobic006G067400--Sobic007G052400 Sobic009G210200 Sobic009G210200 Sobic006G067400--Sobic009G210200 Sobic006G067400--Sobic009G030900 Sobic006G067400--Sobic007G225500 Sobic009G059300--Sobic003G387100 Sobic004G012900 Sobic004G012900 Sobic009G059300--Sobic004G012900 Sobic010G005500 Sobic010G005500 Sobic009G059300--Sobic010G005500 Sobic009G059300--Sobic006G207800 Sobic009G059300--Sobic008G171300 Sobic001G309300 Sobic001G309300 Sobic009G059300--Sobic001G309300 Sobic009G059300--Sobic007G052400 Sobic009G059300--Sobic009G030900 Sobic008G073100 Sobic008G073100 Sobic009G059300--Sobic008G073100 Sobic003G371600--Sobic008G102000 Sobic003G371600--Sobic003G378600 Sobic005G194100 Sobic005G194100 Sobic003G371600--Sobic005G194100 Sobic003G371600--Sobic006G093900 Sobic003G371600--Sobic003G412900 Sobic003G371600--Sobic008G171300 Sobic004G239100 Sobic004G239100 Sobic003G371600--Sobic004G239100 Sobic009G140600 Sobic009G140600 Sobic003G371600--Sobic009G140600 Sobic003G371600--Sobic009G043000 Sobic002G102200--Sobic006G101500 Sobic001G391900 Sobic001G391900 Sobic002G102200--Sobic001G391900 Sobic002G102200--Sobic003G387100 Sobic001G124800 Sobic001G124800 Sobic002G102200--Sobic001G124800 Sobic010G058200 Sobic010G058200 Sobic002G102200--Sobic010G058200 Sobic002G102200--Sobic006G050400 Sobic008G006100 Sobic008G006100 Sobic002G102200--Sobic008G006100 Sobic008G063200 Sobic008G063200 Sobic002G102200--Sobic008G063200 Sobic002G102200--Sobic009G059300 Sobic003G387100--Sobic009G059300 Sobic004G336200 Sobic004G336200 Sobic003G387100--Sobic004G336200 Sobic003G387100--Sobic008G073100 Sobic003G387100--Sobic006G207800 Sobic003G160800 Sobic003G160800 Sobic003G387100--Sobic003G160800 Sobic005G110400 Sobic005G110400 Sobic003G387100--Sobic005G110400 Sobic003G387100--Sobic004G012900 Sobic003G387100--Sobic003G412900 Sobic010G035400 Sobic010G035400 Sobic003G387100--Sobic010G035400 Sobic003G342200 Sobic003G342200 Sobic006G050400--Sobic003G342200 Sobic006G155500 Sobic006G155500 Sobic006G050400--Sobic006G155500 Sobic001G175700 Sobic001G175700 Sobic006G050400--Sobic001G175700 Sobic002G112400 Sobic002G112400 Sobic006G050400--Sobic002G112400 Sobic003G253300 Sobic003G253300 Sobic006G050400--Sobic003G253300 Sobic001G005200 Sobic001G005200 Sobic006G050400--Sobic001G005200 Sobic006G050400--Sobic009G059300 Sobic006G050400--Sobic002G102200 Sobic001G122300 Sobic001G122300 Sobic006G050400--Sobic001G122300
Octagon: transcription factors


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