Gene annotation
Transcriptome id Sobic.002G072600.1
Synonym Sb02g006120
Functional annotation cytochrome b-c1 complex subunit 7, putative, expressed
UniProt C5XCP6
Pfam PF02271
Panther DB PTHR12022
NCBI CDD KOG3440; Ubiquinol cytochrome c reductase, subunit QCR7
KEGG Orthology K00417; QCR7, ubiquinol-cytochrome c reductase subunit 7
Gene Ontology GO:0006122; mitochondrial electron transport, ubiquinol to cytochrome c GO:0005750mitochondrial respiratory chain complex III


Orthologs (automatic annotation)
TAIR AT5G25450 : Cytochrome bd ubiquinol oxidase, 14kDa subunit
RAP-DB (Rice) LOC_Os07g10500.1 : cytochrome b-c1 complex subunit 7, putative, expressed
MaizeGDB (Corn) Zm00025a013257
Brachypodium KQK12590 , KQK20413
Barley HORVU5Hr1G109620.2 , HORVU5Hr1G109620.1
Wheat TraesCS5A02G456800
Populus -


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cDNA sequences
Sobic.002G072600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G162000 - K00878: hydroxyethylthiazole kinase
2 Sobic.010G156000 GDSL-like lipase/acylhydrolase, putative, expressed -
3 Sobic.002G134600 nucleic acid binding protein, putative, expressed -
4 Sobic.004G311900 STE_MEKK_ste11_MAP3K.12 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K13414: mitogen-activated protein kinase kinase kinase 1
5 Sobic.006G073200 OTU-like cysteine protease family protein, putative, expressed K12655: OTUD5, OTU domain-containing protein 5
6 Sobic.004G246900 ankyrin repeat-containing protein, putative, expressed -
7 Sobic.008G161700 homocysteine S-methyltransferase protein, putative, expressed K00547: mmuM, homocysteine S-methyltransferase
8 Sobic.001G362200 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
9 Sobic.006G032900 endonuclease/exonuclease/phosphatase family protein, putative, expressed -
10 Sobic.001G226700 WD repeat-containing protein, putative, expressed -
11 Sobic.001G541100 signal recognition particle receptor, putative, expressed K13431: signal recognition particle receptor subunit alpha
12 Sobic.004G257100 transmembrane 9 superfamily member, putative, expressed -
13 Sobic.006G130800 transporter family protein, putative, expressed K08150: SLC2A13, MFS transporter, SP family, solute carrier family 2 (myo-inositol transporter), member 13
14 Sobic.010G147600 reticulon domain containing protein, putative, expressed -
15 Sobic.008G080200 leucine-rich repeat family protein, putative, expressed -
16 Sobic.001G003500 la domain containing protein, putative, expressed K18757: la-related protein 1
17 Sobic.009G219000 ANTH/ENTH domain containing protein, putative, expressed -
18 Sobic.010G024100 tRNA 2-phosphotransferase 1, putative, expressed K10669: TRPT1, 2'-phosphotransferase
19 Sobic.007G006900 shwachman-Bodian-Diamond syndrome protein, putative, expressed K14574: SDO1, ribosome maturation protein SDO1
20 Sobic.001G312900 transporter family protein, putative, expressed -


Gene co-expression network
sample Sobic002G072600 Sobic002G072600 Sobic003G162000 Sobic003G162000 Sobic002G072600--Sobic003G162000 Sobic010G156000 Sobic010G156000 Sobic002G072600--Sobic010G156000 Sobic002G134600 Sobic002G134600 Sobic002G072600--Sobic002G134600 Sobic004G311900 Sobic004G311900 Sobic002G072600--Sobic004G311900 Sobic006G073200 Sobic006G073200 Sobic002G072600--Sobic006G073200 Sobic004G246900 Sobic004G246900 Sobic002G072600--Sobic004G246900 Sobic008G161700 Sobic008G161700 Sobic002G072600--Sobic008G161700 Sobic001G362200 Sobic001G362200 Sobic002G072600--Sobic001G362200 Sobic006G032900 Sobic006G032900 Sobic002G072600--Sobic006G032900 Sobic003G162000--Sobic002G072600 Sobic003G290100 Sobic003G290100 Sobic003G162000--Sobic003G290100 Sobic003G162000--Sobic010G156000 Sobic004G337200 Sobic004G337200 Sobic003G162000--Sobic004G337200 Sobic006G130800 Sobic006G130800 Sobic003G162000--Sobic006G130800 Sobic006G027000 Sobic006G027000 Sobic003G162000--Sobic006G027000 Sobic010G080300 Sobic010G080300 Sobic003G162000--Sobic010G080300 Sobic001G541100 Sobic001G541100 Sobic003G162000--Sobic001G541100 Sobic001G412100 Sobic001G412100 Sobic003G162000--Sobic001G412100 Sobic002G279700 Sobic002G279700 Sobic010G156000--Sobic002G279700 Sobic002G128900 Sobic002G128900 Sobic010G156000--Sobic002G128900 Sobic010G156000--Sobic001G412100 Sobic010G156000--Sobic006G130800 Sobic010G024100 Sobic010G024100 Sobic010G156000--Sobic010G024100 Sobic001G048100 Sobic001G048100 Sobic010G156000--Sobic001G048100 Sobic010G156000--Sobic003G290100 Sobic010G140600 Sobic010G140600 Sobic010G156000--Sobic010G140600 Sobic010G265300 Sobic010G265300 Sobic010G156000--Sobic010G265300 Sobic003G309200 Sobic003G309200 Sobic002G134600--Sobic003G309200 Sobic007G006900 Sobic007G006900 Sobic002G134600--Sobic007G006900 Sobic001G226700 Sobic001G226700 Sobic002G134600--Sobic001G226700 Sobic001G425800 Sobic001G425800 Sobic002G134600--Sobic001G425800 Sobic002G294800 Sobic002G294800 Sobic002G134600--Sobic002G294800 Sobic002G134600--Sobic001G362200 Sobic009G219000 Sobic009G219000 Sobic002G134600--Sobic009G219000 Sobic001G122832 Sobic001G122832 Sobic002G134600--Sobic001G122832 Sobic010G076300 Sobic010G076300 Sobic002G134600--Sobic010G076300 Sobic001G015800 Sobic001G015800 Sobic004G311900--Sobic001G015800 Sobic002G119400 Sobic002G119400 Sobic004G311900--Sobic002G119400 Sobic008G124900 Sobic008G124900 Sobic004G311900--Sobic008G124900 Sobic004G176400 Sobic004G176400 Sobic004G311900--Sobic004G176400 Sobic004G323700 Sobic004G323700 Sobic004G311900--Sobic004G323700 Sobic004G353000 Sobic004G353000 Sobic004G311900--Sobic004G353000 Sobic010G029900 Sobic010G029900 Sobic004G311900--Sobic010G029900 Sobic004G286500 Sobic004G286500 Sobic004G311900--Sobic004G286500 Sobic006G250300 Sobic006G250300 Sobic004G311900--Sobic006G250300 Sobic008G157200 Sobic008G157200 Sobic006G073200--Sobic008G157200 Sobic004G257100 Sobic004G257100 Sobic006G073200--Sobic004G257100 Sobic001G431000 Sobic001G431000 Sobic006G073200--Sobic001G431000 Sobic001G537500 Sobic001G537500 Sobic006G073200--Sobic001G537500 Sobic001G493200 Sobic001G493200 Sobic006G073200--Sobic001G493200 Sobic008G135200 Sobic008G135200 Sobic006G073200--Sobic008G135200 Sobic006G036100 Sobic006G036100 Sobic006G073200--Sobic006G036100 Sobic004G131300 Sobic004G131300 Sobic006G073200--Sobic004G131300 Sobic001G251100 Sobic001G251100 Sobic006G073200--Sobic001G251100 Sobic010G078900 Sobic010G078900 Sobic004G246900--Sobic010G078900 Sobic001G102700 Sobic001G102700 Sobic004G246900--Sobic001G102700 Sobic004G246900--Sobic002G134600 Sobic004G246900--Sobic001G226700 Sobic010G079900 Sobic010G079900 Sobic004G246900--Sobic010G079900 Sobic001G088100 Sobic001G088100 Sobic004G246900--Sobic001G088100 Sobic004G246900--Sobic002G294800 Sobic010G021500 Sobic010G021500 Sobic004G246900--Sobic010G021500 Sobic005G084400 Sobic005G084400 Sobic004G246900--Sobic005G084400 Sobic008G161700--Sobic002G072600 Sobic008G161700--Sobic003G162000 Sobic010G268200 Sobic010G268200 Sobic008G161700--Sobic010G268200 Sobic007G124100 Sobic007G124100 Sobic008G161700--Sobic007G124100 Sobic003G422700 Sobic003G422700 Sobic008G161700--Sobic003G422700 Sobic006G251000 Sobic006G251000 Sobic008G161700--Sobic006G251000 Sobic008G003900 Sobic008G003900 Sobic008G161700--Sobic008G003900 Sobic001G312900 Sobic001G312900 Sobic008G161700--Sobic001G312900 Sobic008G161700--Sobic003G290100 Sobic003G332500 Sobic003G332500 Sobic001G362200--Sobic003G332500 Sobic003G109700 Sobic003G109700 Sobic001G362200--Sobic003G109700 Sobic001G362200--Sobic006G032900 Sobic001G362200--Sobic001G102700 Sobic001G515000 Sobic001G515000 Sobic001G362200--Sobic001G515000 Sobic004G192200 Sobic004G192200 Sobic001G362200--Sobic004G192200 Sobic004G072100 Sobic004G072100 Sobic001G362200--Sobic004G072100 Sobic001G362200--Sobic002G134600 Sobic007G183900 Sobic007G183900 Sobic001G362200--Sobic007G183900 Sobic006G032900--Sobic001G362200 Sobic006G032900--Sobic003G109700 Sobic001G518400 Sobic001G518400 Sobic006G032900--Sobic001G518400 Sobic002G317300 Sobic002G317300 Sobic006G032900--Sobic002G317300 Sobic006G032900--Sobic001G226700 Sobic008G083000 Sobic008G083000 Sobic006G032900--Sobic008G083000 Sobic003G401100 Sobic003G401100 Sobic006G032900--Sobic003G401100 Sobic006G032900--Sobic001G102700 Sobic009G103600 Sobic009G103600 Sobic006G032900--Sobic009G103600
Octagon: transcription factors


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