Gene annotation
Transcriptome id Sobic.002G139100.3,Sobic.002G139100.4,Sobic.002G139100.1,Sobic.002G139100.5
Synonym Sb02g012610
Functional annotation lipase, putative, expressed
UniProt A0A1B6QB45 , A0A1W0W3W1
Pfam PF01764
Panther DB PTHR21493 PTHR21493:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006629; lipid metabolic process


Orthologs (automatic annotation)
TAIR AT2G42450 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os09g39790.1 : lipase, putative, expressed
MaizeGDB (Corn) Zm00025a013482
Brachypodium KQJ91643
Barley HORVU4Hr1G000940.3 , HORVU4Hr1G000940.1 , HORVU4Hr1G000940.6 , HORVU4Hr1G000940.5 , HORVU4Hr1G000940.7 , HORVU4Hr1G000940.10 , HORVU4Hr1G000940.2 , HORVU4Hr1G000940.4
Wheat TraesCS4D02G001400 , TraesCS4A02G001600 , TraesCS4B02G001600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G275600 hydrolase, putative, expressed K01438: acetylornithine deacetylase
2 Sobic.001G537500 GTP-binding protein, putative, expressed K06944: uncharacterized protein
3 Sobic.005G140500 peptidase, M24 family protein, putative, expressed K01262: Xaa-Pro aminopeptidase
4 Sobic.003G165101 - K12876: RBM8A, RNA-binding protein 8A
5 Sobic.010G155600 DJ-1 family protein, putative, expressed K03152: protein deglycase
6 Sobic.006G010400 tRNA-dihydrouridine synthase 3-like, putative, expressed K05544: tRNA-dihydrouridine synthase 3
7 Sobic.006G237000 3-oxoacyl-synthase III, chloroplast precursor, putative, expressed K00648: 3-oxoacyl-[acyl-carrier-protein] synthase III
8 Sobic.007G112600 co-chaperone GrpE protein, putative, expressed K03687: molecular chaperone GrpE
9 Sobic.003G309300 radical SAM enzyme, putative, expressed K03644: lipA, LIAS, LIP1, lipoyl synthase
10 Sobic.006G238700 C2 domain containing protein, expressed -
11 Sobic.006G073200 OTU-like cysteine protease family protein, putative, expressed K12655: OTUD5, OTU domain-containing protein 5
12 Sobic.006G213400 bifunctional purine biosynthesis protein purH, putative, expressed K00602: phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase
13 Sobic.001G041700 BRCA1 C Terminus domain containing protein, expressed -
14 Sobic.008G190100 acetyl-CoA acetyltransferase, cytosolic, putative, expressed K00626: ACAT, acetyl-CoA C-acetyltransferase
15 Sobic.004G060100 ATP synthase, putative, expressed K02145: ATPeV1A, V-type H+-transporting ATPase subunit A
16 Sobic.004G314500 1-aminocyclopropane-1-carboxylate deaminase, putative, expressed -
17 Sobic.007G109700 YT521-B-like family domain containing protein, expressed -
18 Sobic.006G084000 CDK5RAP1, putative, expressed K15865: threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1
19 Sobic.009G249800 AARP2CN domain containing protein, expressed K14799: pre-rRNA-processing protein TSR1
20 Sobic.001G434700 phosphomevalonate kinase, putative, expressed K00938: E2.7.4.2, phosphomevalonate kinase


Gene co-expression network
sample Sobic002G139100 Sobic002G139100 Sobic004G275600 Sobic004G275600 Sobic002G139100--Sobic004G275600 Sobic001G537500 Sobic001G537500 Sobic002G139100--Sobic001G537500 Sobic005G140500 Sobic005G140500 Sobic002G139100--Sobic005G140500 Sobic003G165101 Sobic003G165101 Sobic002G139100--Sobic003G165101 Sobic010G155600 Sobic010G155600 Sobic002G139100--Sobic010G155600 Sobic006G010400 Sobic006G010400 Sobic002G139100--Sobic006G010400 Sobic006G237000 Sobic006G237000 Sobic002G139100--Sobic006G237000 Sobic007G112600 Sobic007G112600 Sobic002G139100--Sobic007G112600 Sobic003G309300 Sobic003G309300 Sobic002G139100--Sobic003G309300 Sobic004G275600--Sobic003G309300 Sobic004G275600--Sobic003G165101 Sobic004G275600--Sobic001G537500 Sobic009G124000 Sobic009G124000 Sobic004G275600--Sobic009G124000 Sobic006G073200 Sobic006G073200 Sobic004G275600--Sobic006G073200 Sobic007G071900 Sobic007G071900 Sobic004G275600--Sobic007G071900 Sobic003G420900 Sobic003G420900 Sobic004G275600--Sobic003G420900 Sobic008G067100 Sobic008G067100 Sobic004G275600--Sobic008G067100 Sobic004G257100 Sobic004G257100 Sobic004G275600--Sobic004G257100 Sobic001G537500--Sobic006G073200 Sobic004G167200 Sobic004G167200 Sobic001G537500--Sobic004G167200 Sobic006G002800 Sobic006G002800 Sobic001G537500--Sobic006G002800 Sobic001G537500--Sobic004G275600 Sobic001G537500--Sobic004G257100 Sobic007G145400 Sobic007G145400 Sobic001G537500--Sobic007G145400 Sobic005G115500 Sobic005G115500 Sobic001G537500--Sobic005G115500 Sobic001G178300 Sobic001G178300 Sobic001G537500--Sobic001G178300 Sobic002G246700 Sobic002G246700 Sobic001G537500--Sobic002G246700 Sobic004G262700 Sobic004G262700 Sobic005G140500--Sobic004G262700 Sobic010G100800 Sobic010G100800 Sobic005G140500--Sobic010G100800 Sobic002G428800 Sobic002G428800 Sobic005G140500--Sobic002G428800 Sobic010G013300 Sobic010G013300 Sobic005G140500--Sobic010G013300 Sobic006G238700 Sobic006G238700 Sobic005G140500--Sobic006G238700 Sobic003G194100 Sobic003G194100 Sobic005G140500--Sobic003G194100 Sobic006G280000 Sobic006G280000 Sobic005G140500--Sobic006G280000 Sobic001G396000 Sobic001G396000 Sobic005G140500--Sobic001G396000 Sobic007G029500 Sobic007G029500 Sobic005G140500--Sobic007G029500 Sobic003G165101--Sobic004G275600 Sobic010G179700 Sobic010G179700 Sobic003G165101--Sobic010G179700 Sobic004G283600 Sobic004G283600 Sobic003G165101--Sobic004G283600 Sobic003G165101--Sobic006G010400 Sobic001G428800 Sobic001G428800 Sobic003G165101--Sobic001G428800 Sobic007G161200 Sobic007G161200 Sobic003G165101--Sobic007G161200 Sobic003G165101--Sobic006G237000 Sobic003G165101--Sobic003G309300 Sobic005G163700 Sobic005G163700 Sobic003G165101--Sobic005G163700 Sobic010G155600--Sobic006G237000 Sobic005G031000 Sobic005G031000 Sobic010G155600--Sobic005G031000 Sobic008G097600 Sobic008G097600 Sobic010G155600--Sobic008G097600 Sobic002G125800 Sobic002G125800 Sobic010G155600--Sobic002G125800 Sobic001G434700 Sobic001G434700 Sobic010G155600--Sobic001G434700 Sobic010G155600--Sobic004G275600 Sobic010G155600--Sobic001G537500 Sobic004G356200 Sobic004G356200 Sobic010G155600--Sobic004G356200 Sobic004G037200 Sobic004G037200 Sobic010G155600--Sobic004G037200 Sobic001G251600 Sobic001G251600 Sobic006G010400--Sobic001G251600 Sobic006G084000 Sobic006G084000 Sobic006G010400--Sobic006G084000 Sobic006G010400--Sobic007G071900 Sobic006G010400--Sobic001G537500 Sobic009G249800 Sobic009G249800 Sobic006G010400--Sobic009G249800 Sobic007G140400 Sobic007G140400 Sobic006G010400--Sobic007G140400 Sobic008G051200 Sobic008G051200 Sobic006G010400--Sobic008G051200 Sobic006G010400--Sobic004G257100 Sobic001G460500 Sobic001G460500 Sobic006G010400--Sobic001G460500 Sobic006G237000--Sobic002G125800 Sobic006G237000--Sobic005G031000 Sobic001G200200 Sobic001G200200 Sobic006G237000--Sobic001G200200 Sobic006G237000--Sobic010G155600 Sobic010G003900 Sobic010G003900 Sobic006G237000--Sobic010G003900 Sobic002G155100 Sobic002G155100 Sobic006G237000--Sobic002G155100 Sobic008G059900 Sobic008G059900 Sobic006G237000--Sobic008G059900 Sobic005G098800 Sobic005G098800 Sobic006G237000--Sobic005G098800 Sobic006G237000--Sobic001G537500 Sobic001G015400 Sobic001G015400 Sobic007G112600--Sobic001G015400 Sobic003G146600 Sobic003G146600 Sobic007G112600--Sobic003G146600 Sobic002G150700 Sobic002G150700 Sobic007G112600--Sobic002G150700 Sobic004G208500 Sobic004G208500 Sobic007G112600--Sobic004G208500 Sobic001G145400 Sobic001G145400 Sobic007G112600--Sobic001G145400 Sobic010G223300 Sobic010G223300 Sobic007G112600--Sobic010G223300 Sobic001G471000 Sobic001G471000 Sobic007G112600--Sobic001G471000 Sobic008G103300 Sobic008G103300 Sobic007G112600--Sobic008G103300 Sobic006G083100 Sobic006G083100 Sobic007G112600--Sobic006G083100 Sobic003G309300--Sobic004G275600 Sobic006G157000 Sobic006G157000 Sobic003G309300--Sobic006G157000 Sobic003G309300--Sobic003G165101 Sobic003G309300--Sobic007G071900 Sobic008G038600 Sobic008G038600 Sobic003G309300--Sobic008G038600 Sobic003G309300--Sobic006G237000 Sobic003G309300--Sobic009G124000 Sobic003G309300--Sobic001G537500 Sobic010G216300 Sobic010G216300 Sobic003G309300--Sobic010G216300
Octagon: transcription factors


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