Gene annotation
Transcriptome id Sobic.006G103900.1,Sobic.006G103900.2
Synonym Sb06g018700
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
wound/stress protein, putative, expressed
UniProt A0A1Z5RDB2 , C5Y9R9
Pfam PF01477
Panther DB PTHR31718 PTHR31718:SF0
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT4G39730 : Lipase/lipooxygenase, PLAT/LH2 family protein
RAP-DB (Rice) LOC_Os04g38390.1 : wound/stress protein, putative, expressed
MaizeGDB (Corn) Zm00025a033168 , Zm00025a011142
Brachypodium KQJ82935 , KQK01860
Barley HORVU2Hr1G079840.1 , HORVU2Hr1G079840.2 , HORVU2Hr1G079840.3 , HORVU2Hr1G079840.4 , HORVU6Hr1G074940.2 , HORVU6Hr1G074940.3 , HORVU6Hr1G074940.1
Wheat TraesCS2D02G319800 , TraesCS2B02G339800 , TraesCS6B02G330700 , TraesCS2A02G342100 , TraesCS6D02G280900
Populus -


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cDNA sequences
Sobic.006G103900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G049200 abscisic stress-ripening, putative, expressed -
2 Sobic.009G009500 response to wounding - serine-type endopeptidase inhibitor activity(PubMedID : 24655390)@response to wounding - serine- type endopeptidase inhibitor activity(PubMedID : 24655390)@inhibitor I family protein, putative, expressed -
3 Sobic.003G355800 BBTI13 - Bowman-Birk type bran trypsin inhibitor precursor, expressed -
4 Sobic.009G000900 methyltransferase, putative, expressed K08241: jasmonate O-methyltransferase
5 Sobic.009G070800 HAD superfamily phosphatase, putative, expressed -
6 Sobic.008G181300 expressed protein -
7 Sobic.001G320700 prephenate dehydratase domain containing protein, expressed -
8 Sobic.007G168000 chlorophyllase-2, chloroplast precursor, putative, expressed K08099: chlorophyllase
9 Sobic.010G094800 pro-resilin precursor, putative, expressed -
10 Sobic.005G099500 nucleoside-triphosphatase, putative, expressed K14641: apyrase
11 Sobic.003G325500 ICE-like protease p20 domain containing protein, putative, expressed -
12 Sobic.006G078500 abscisic stress-ripening, putative, expressed -
13 Sobic.001G125900 lipoxygenase, putative, expressed K15718: linoleate 9S-lipoxygenase
14 Sobic.004G018400 peptidyl-prolyl cis-trans isomerase, putative, expressed K01802: peptidylprolyl isomerase
15 Sobic.003G385500 "Lypoxygenase, probably induced by oxidative stress, up-regulated under severe drought stress"(PubMedID : 24655390)@lipoxygenase, putative, expressed K15718: linoleate 9S-lipoxygenase
16 Sobic.003G327700 cysteine proteinase inhibitor (cystatin)(PubMedID : 8709954)@cysteine proteinase inhibitor precursor protein, putative, expressed -
17 Sobic.009G197300 BURP domain containing protein, expressed -
18 Sobic.006G007600 polyphenol oxidase, putative, expressed -
19 Sobic.006G052200 nodulin, putative, expressed -
20 Sobic.006G265000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@AMP-binding enzyme, putative, expressed -


Gene co-expression network
sample Sobic006G103900 Sobic006G103900 Sobic008G049200 Sobic008G049200 Sobic006G103900--Sobic008G049200 Sobic009G009500 Sobic009G009500 Sobic006G103900--Sobic009G009500 Sobic003G355800 Sobic003G355800 Sobic006G103900--Sobic003G355800 Sobic009G000900 Sobic009G000900 Sobic006G103900--Sobic009G000900 Sobic009G070800 Sobic009G070800 Sobic006G103900--Sobic009G070800 Sobic008G181300 Sobic008G181300 Sobic006G103900--Sobic008G181300 Sobic001G320700 Sobic001G320700 Sobic006G103900--Sobic001G320700 Sobic007G168000 Sobic007G168000 Sobic006G103900--Sobic007G168000 Sobic010G094800 Sobic010G094800 Sobic006G103900--Sobic010G094800 Sobic008G049200--Sobic006G103900 Sobic006G078500 Sobic006G078500 Sobic008G049200--Sobic006G078500 Sobic008G049200--Sobic009G009500 Sobic008G049200--Sobic007G168000 Sobic008G049200--Sobic009G070800 Sobic004G143801 Sobic004G143801 Sobic008G049200--Sobic004G143801 Sobic008G049200--Sobic009G000900 Sobic008G049200--Sobic001G320700 Sobic008G049200--Sobic003G355800 Sobic009G009500--Sobic009G070800 Sobic009G009500--Sobic009G000900 Sobic009G009500--Sobic006G103900 Sobic009G009500--Sobic007G168000 Sobic009G009500--Sobic003G355800 Sobic009G009500--Sobic008G049200 Sobic001G315200 Sobic001G315200 Sobic009G009500--Sobic001G315200 Sobic002G107000 Sobic002G107000 Sobic009G009500--Sobic002G107000 Sobic009G197300 Sobic009G197300 Sobic009G009500--Sobic009G197300 Sobic003G355800--Sobic009G009500 Sobic003G355800--Sobic009G197300 Sobic003G355800--Sobic007G168000 Sobic001G276100 Sobic001G276100 Sobic003G355800--Sobic001G276100 Sobic003G355800--Sobic006G103900 Sobic003G355800--Sobic009G000900 Sobic003G355800--Sobic009G070800 Sobic003G355800--Sobic001G320700 Sobic003G355800--Sobic004G143801 Sobic004G007500 Sobic004G007500 Sobic009G000900--Sobic004G007500 Sobic009G000900--Sobic009G070800 Sobic009G000900--Sobic009G009500 Sobic001G161300 Sobic001G161300 Sobic009G000900--Sobic001G161300 Sobic007G029000 Sobic007G029000 Sobic009G000900--Sobic007G029000 Sobic009G000900--Sobic001G276100 Sobic009G075100 Sobic009G075100 Sobic009G000900--Sobic009G075100 Sobic009G000900--Sobic009G197300 Sobic004G343100 Sobic004G343100 Sobic009G000900--Sobic004G343100 Sobic009G070800--Sobic009G009500 Sobic009G070800--Sobic009G000900 Sobic009G070800--Sobic007G029000 Sobic009G070800--Sobic004G007500 Sobic009G070800--Sobic001G315200 Sobic009G070800--Sobic009G197300 Sobic009G070800--Sobic007G168000 Sobic009G070800--Sobic009G075100 Sobic009G070800--Sobic008G049200 Sobic009G192100 Sobic009G192100 Sobic008G181300--Sobic009G192100 Sobic003G310500 Sobic003G310500 Sobic008G181300--Sobic003G310500 Sobic009G233900 Sobic009G233900 Sobic008G181300--Sobic009G233900 Sobic008G038100 Sobic008G038100 Sobic008G181300--Sobic008G038100 Sobic008G018600 Sobic008G018600 Sobic008G181300--Sobic008G018600 Sobic001G314800 Sobic001G314800 Sobic008G181300--Sobic001G314800 Sobic002G407200 Sobic002G407200 Sobic008G181300--Sobic002G407200 Sobic009G216050 Sobic009G216050 Sobic008G181300--Sobic009G216050 Sobic004G209500 Sobic004G209500 Sobic008G181300--Sobic004G209500 Sobic003G214000 Sobic003G214000 Sobic001G320700--Sobic003G214000 Sobic004G217700 Sobic004G217700 Sobic001G320700--Sobic004G217700 Sobic001G201800 Sobic001G201800 Sobic001G320700--Sobic001G201800 Sobic002G423600 Sobic002G423600 Sobic001G320700--Sobic002G423600 Sobic004G078600 Sobic004G078600 Sobic001G320700--Sobic004G078600 Sobic010G214200 Sobic010G214200 Sobic001G320700--Sobic010G214200 Sobic006G045000 Sobic006G045000 Sobic001G320700--Sobic006G045000 Sobic003G402200 Sobic003G402200 Sobic001G320700--Sobic003G402200 Sobic003G248901 Sobic003G248901 Sobic001G320700--Sobic003G248901 Sobic007G168000--Sobic004G143801 Sobic006G007300 Sobic006G007300 Sobic007G168000--Sobic006G007300 Sobic008G077800 Sobic008G077800 Sobic007G168000--Sobic008G077800 Sobic006G007600 Sobic006G007600 Sobic007G168000--Sobic006G007600 Sobic002G093600 Sobic002G093600 Sobic007G168000--Sobic002G093600 Sobic002G298400 Sobic002G298400 Sobic007G168000--Sobic002G298400 Sobic002G391700 Sobic002G391700 Sobic007G168000--Sobic002G391700 Sobic002G087500 Sobic002G087500 Sobic007G168000--Sobic002G087500 Sobic002G040400 Sobic002G040400 Sobic007G168000--Sobic002G040400 Sobic003G003000 Sobic003G003000 Sobic010G094800--Sobic003G003000 Sobic004G018400 Sobic004G018400 Sobic010G094800--Sobic004G018400 Sobic001G125900 Sobic001G125900 Sobic010G094800--Sobic001G125900 Sobic006G281200 Sobic006G281200 Sobic010G094800--Sobic006G281200 Sobic002G241500 Sobic002G241500 Sobic010G094800--Sobic002G241500 Sobic003G325500 Sobic003G325500 Sobic010G094800--Sobic003G325500 Sobic010G094800--Sobic006G103900 Sobic001G128100 Sobic001G128100 Sobic010G094800--Sobic001G128100 Sobic001G081400 Sobic001G081400 Sobic010G094800--Sobic001G081400
Octagon: transcription factors


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