Gene annotation
Transcriptome id Sobic.009G136300.1
Synonym Sb09g020220
Functional annotation alpha/beta hydrolase fold, putative, expressed
UniProt C5YXT6
Pfam PF12695
Panther DB PTHR23024 PTHR23024:SF168
NCBI CDD KOG1515; Arylacetamide deacetylase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G16080 : carboxyesterase 17
RAP-DB (Rice) LOC_Os05g33940.1 : alpha/beta hydrolase fold, putative, expressed
MaizeGDB (Corn) Zm00025a045068 , Zm00025a043680 , Zm00025a043681 , Zm00025a037446
Brachypodium -
Barley HORVU1Hr1G063380.1 , HORVU1Hr1G063450.1
Wheat -
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.009G136300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G029000 TKL_IRAK_DUF26-lc.4 - DUF26 kinases have homology to DUF26 containing loci, expressed -
2 Sobic.004G007500 cytochrome P450, putative, expressed K10528: hydroperoxide lyase
3 Sobic.002G384400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@FAD dependent oxidoreductase domain containing protein, expressed K03146: THI4, cysteine-dependent adenosine diphosphate thiazole synthase
4 Sobic.009G000900 methyltransferase, putative, expressed K08241: jasmonate O-methyltransferase
5 Sobic.004G019400 Protein terpene synthase 14 (At)(PubMedID : 27208977)@"Protein terpene synthase 14, S-linalool synthase (Os)"(PubMedID : 27208977)@terpene synthase, putative, expressed -
6 Sobic.001G161300 mttA/Hcf106 family protein, putative, expressed K03116: sec-independent protein translocase protein TatA
7 Sobic.009G197300 BURP domain containing protein, expressed -
8 Sobic.001G276100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptide transporter PTR2, putative, expressed -
9 Sobic.004G343100 YCF37, putative, expressed -
10 Sobic.009G070800 HAD superfamily phosphatase, putative, expressed -
11 Sobic.010G265500 expressed protein -
12 Sobic.003G437600 thioredoxin, putative, expressed -
13 Sobic.002G069050 - -
14 Sobic.004G182700 OsFBK8 - F-box domain and kelch repeat containing protein, expressed -
15 Sobic.004G068700 cytochrome P450 71D10, putative, expressed -
16 Sobic.009G019000 S-domain receptor-like protein kinase, putative, expressed -
17 Sobic.010G199000 bZIP transcription factor domain containing protein, expressed -
18 Sobic.001G448800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lecithin cholesterol acyltransferase, putative, expressed -
19 Sobic.001G198700 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
20 Sobic.009G075100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@lachrymatory factor synthase, putative, expressed -


Gene co-expression network
sample Sobic009G136300 Sobic009G136300 Sobic007G029000 Sobic007G029000 Sobic009G136300--Sobic007G029000 Sobic004G007500 Sobic004G007500 Sobic009G136300--Sobic004G007500 Sobic002G384400 Sobic002G384400 Sobic009G136300--Sobic002G384400 Sobic009G000900 Sobic009G000900 Sobic009G136300--Sobic009G000900 Sobic004G019400 Sobic004G019400 Sobic009G136300--Sobic004G019400 Sobic001G161300 Sobic001G161300 Sobic009G136300--Sobic001G161300 Sobic009G197300 Sobic009G197300 Sobic009G136300--Sobic009G197300 Sobic001G276100 Sobic001G276100 Sobic009G136300--Sobic001G276100 Sobic004G343100 Sobic004G343100 Sobic009G136300--Sobic004G343100 Sobic007G029000--Sobic004G007500 Sobic009G070800 Sobic009G070800 Sobic007G029000--Sobic009G070800 Sobic007G029000--Sobic009G136300 Sobic007G029000--Sobic009G000900 Sobic007G029000--Sobic001G161300 Sobic009G075100 Sobic009G075100 Sobic007G029000--Sobic009G075100 Sobic003G106500 Sobic003G106500 Sobic007G029000--Sobic003G106500 Sobic007G029000--Sobic009G197300 Sobic001G198700 Sobic001G198700 Sobic007G029000--Sobic001G198700 Sobic004G007500--Sobic009G000900 Sobic004G007500--Sobic007G029000 Sobic004G007500--Sobic001G161300 Sobic004G007500--Sobic009G075100 Sobic001G448800 Sobic001G448800 Sobic004G007500--Sobic001G448800 Sobic004G007500--Sobic009G070800 Sobic004G007500--Sobic001G276100 Sobic001G281800 Sobic001G281800 Sobic004G007500--Sobic001G281800 Sobic004G007500--Sobic003G106500 Sobic004G068700 Sobic004G068700 Sobic002G384400--Sobic004G068700 Sobic002G384400--Sobic001G161300 Sobic009G138900 Sobic009G138900 Sobic002G384400--Sobic009G138900 Sobic002G386400 Sobic002G386400 Sobic002G384400--Sobic002G386400 Sobic002G226100 Sobic002G226100 Sobic002G384400--Sobic002G226100 Sobic002G038300 Sobic002G038300 Sobic002G384400--Sobic002G038300 Sobic004G314800 Sobic004G314800 Sobic002G384400--Sobic004G314800 Sobic006G204100 Sobic006G204100 Sobic002G384400--Sobic006G204100 Sobic002G345200 Sobic002G345200 Sobic002G384400--Sobic002G345200 Sobic009G000900--Sobic004G007500 Sobic009G000900--Sobic009G070800 Sobic009G009500 Sobic009G009500 Sobic009G000900--Sobic009G009500 Sobic009G000900--Sobic001G161300 Sobic009G000900--Sobic007G029000 Sobic009G000900--Sobic001G276100 Sobic009G000900--Sobic009G075100 Sobic009G000900--Sobic009G197300 Sobic009G000900--Sobic004G343100 Sobic005G186500 Sobic005G186500 Sobic004G019400--Sobic005G186500 Sobic007G037800 Sobic007G037800 Sobic004G019400--Sobic007G037800 Sobic001G201800 Sobic001G201800 Sobic004G019400--Sobic001G201800 Sobic003G096500 Sobic003G096500 Sobic004G019400--Sobic003G096500 Sobic008G060200 Sobic008G060200 Sobic004G019400--Sobic008G060200 Sobic009G202400 Sobic009G202400 Sobic004G019400--Sobic009G202400 Sobic008G060300 Sobic008G060300 Sobic004G019400--Sobic008G060300 Sobic005G193500 Sobic005G193500 Sobic004G019400--Sobic005G193500 Sobic002G108400 Sobic002G108400 Sobic004G019400--Sobic002G108400 Sobic001G161300--Sobic002G038300 Sobic001G161300--Sobic004G007500 Sobic001G161300--Sobic002G386400 Sobic001G161300--Sobic004G068700 Sobic001G161300--Sobic001G276100 Sobic001G161300--Sobic002G226100 Sobic001G161300--Sobic002G384400 Sobic001G161300--Sobic004G343100 Sobic001G161300--Sobic009G000900 Sobic006G007600 Sobic006G007600 Sobic009G197300--Sobic006G007600 Sobic009G197300--Sobic001G201800 Sobic009G197300--Sobic009G075100 Sobic009G197300--Sobic009G000900 Sobic009G197300--Sobic004G007500 Sobic004G078600 Sobic004G078600 Sobic009G197300--Sobic004G078600 Sobic009G197300--Sobic009G070800 Sobic009G115400 Sobic009G115400 Sobic009G197300--Sobic009G115400 Sobic009G197300--Sobic002G108400 Sobic001G276100--Sobic001G161300 Sobic001G276100--Sobic009G000900 Sobic001G276100--Sobic004G007500 Sobic001G276100--Sobic002G226100 Sobic001G276100--Sobic009G197300 Sobic003G355800 Sobic003G355800 Sobic001G276100--Sobic003G355800 Sobic003G214000 Sobic003G214000 Sobic001G276100--Sobic003G214000 Sobic006G052200 Sobic006G052200 Sobic001G276100--Sobic006G052200 Sobic001G276100--Sobic002G384400 Sobic008G063100 Sobic008G063100 Sobic004G343100--Sobic008G063100 Sobic010G265500 Sobic010G265500 Sobic004G343100--Sobic010G265500 Sobic005G021600 Sobic005G021600 Sobic004G343100--Sobic005G021600 Sobic003G421400 Sobic003G421400 Sobic004G343100--Sobic003G421400 Sobic001G498300 Sobic001G498300 Sobic004G343100--Sobic001G498300 Sobic003G187000 Sobic003G187000 Sobic004G343100--Sobic003G187000 Sobic004G343100--Sobic001G161300 Sobic007G132500 Sobic007G132500 Sobic004G343100--Sobic007G132500 Sobic002G281000 Sobic002G281000 Sobic004G343100--Sobic002G281000
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.