Gene annotation
Transcriptome id Sobic.001G315200.1
Synonym Sb01g030640
Functional annotation expressed protein
UniProt C5WUF4
Pfam -
Panther DB PTHR34576 PTHR34576:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os10g39000.1 : expressed protein
MaizeGDB (Corn) Zm00025a003142
Brachypodium -
Barley HORVU1Hr1G049650.1 , HORVU1Hr1G049650.2
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G472000 Polyamine oxidase 1("PubMedID : 26759170,PubMedID : 24597475")@amine oxidase, flavin-containing, domain containing protein, expressed K13366: MPAO, polyamine oxidase
2 Sobic.009G070800 HAD superfamily phosphatase, putative, expressed -
3 Sobic.009G161100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase, aldo/keto reductase family protein, putative, expressed -
4 Sobic.009G009500 response to wounding - serine-type endopeptidase inhibitor activity(PubMedID : 24655390)@response to wounding - serine- type endopeptidase inhibitor activity(PubMedID : 24655390)@inhibitor I family protein, putative, expressed -
5 Sobic.008G189500 similar to Secretory acid phosphatase - Pfam Calcineurin-like phosphoesterase(PubMedID : 24655390)@similar to Secretory acid phosphatase - Pfam Calcineurin -like phosphoesterase(PubMedID : 24655390)@Ser/Thr protein phosphatase family protein, putative, expressed -
6 Sobic.002G107000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aldehyde oxidase, putative, expressed -
7 Sobic.009G000900 methyltransferase, putative, expressed K08241: jasmonate O-methyltransferase
8 Sobic.003G007800 phosphorylase domain containing protein, putative, expressed -
9 Sobic.004G007500 cytochrome P450, putative, expressed K10528: hydroperoxide lyase
10 Sobic.004G151600 fruit protein PKIWI502, putative, expressed -
11 Sobic.007G029000 TKL_IRAK_DUF26-lc.4 - DUF26 kinases have homology to DUF26 containing loci, expressed -
12 Sobic.005G200600 dirigent, putative, expressed -
13 Sobic.009G146400 dnaJ domain containing protein, expressed K09519: DnaJ homolog subfamily B member 13
14 Sobic.009G206000 anthocyanidin 5,3-O-glucosyltransferase, putative, expressed -
15 Sobic.004G249400 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
16 Sobic.006G238100 LTPL126 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
17 Sobic.001G065500 ZOS3-19 - C2H2 zinc finger protein, expressed -
18 Sobic.003G068300 transferase family protein, putative, expressed -
19 Sobic.005G029400 strictosidine synthase, putative, expressed -
20 Sobic.005G099500 nucleoside-triphosphatase, putative, expressed K14641: apyrase


Gene co-expression network
sample Sobic001G315200 Sobic001G315200 Sobic001G472000 Sobic001G472000 Sobic001G315200--Sobic001G472000 Sobic009G070800 Sobic009G070800 Sobic001G315200--Sobic009G070800 Sobic009G161100 Sobic009G161100 Sobic001G315200--Sobic009G161100 Sobic009G009500 Sobic009G009500 Sobic001G315200--Sobic009G009500 Sobic008G189500 Sobic008G189500 Sobic001G315200--Sobic008G189500 Sobic002G107000 Sobic002G107000 Sobic001G315200--Sobic002G107000 Sobic009G000900 Sobic009G000900 Sobic001G315200--Sobic009G000900 Sobic003G007800 Sobic003G007800 Sobic001G315200--Sobic003G007800 Sobic004G007500 Sobic004G007500 Sobic001G315200--Sobic004G007500 Sobic001G472000--Sobic008G189500 Sobic001G472000--Sobic003G007800 Sobic005G029400 Sobic005G029400 Sobic001G472000--Sobic005G029400 Sobic001G472000--Sobic009G161100 Sobic009G070600 Sobic009G070600 Sobic001G472000--Sobic009G070600 Sobic001G255300 Sobic001G255300 Sobic001G472000--Sobic001G255300 Sobic001G472000--Sobic001G315200 Sobic001G541300 Sobic001G541300 Sobic001G472000--Sobic001G541300 Sobic004G249400 Sobic004G249400 Sobic001G472000--Sobic004G249400 Sobic009G070800--Sobic009G009500 Sobic009G070800--Sobic009G000900 Sobic007G029000 Sobic007G029000 Sobic009G070800--Sobic007G029000 Sobic009G070800--Sobic004G007500 Sobic009G070800--Sobic001G315200 Sobic009G197300 Sobic009G197300 Sobic009G070800--Sobic009G197300 Sobic007G168000 Sobic007G168000 Sobic009G070800--Sobic007G168000 Sobic009G075100 Sobic009G075100 Sobic009G070800--Sobic009G075100 Sobic008G049200 Sobic008G049200 Sobic009G070800--Sobic008G049200 Sobic009G161100--Sobic001G472000 Sobic005G200600 Sobic005G200600 Sobic009G161100--Sobic005G200600 Sobic002G141100 Sobic002G141100 Sobic009G161100--Sobic002G141100 Sobic005G218600 Sobic005G218600 Sobic009G161100--Sobic005G218600 Sobic009G161100--Sobic004G249400 Sobic009G161100--Sobic001G541300 Sobic006G238100 Sobic006G238100 Sobic009G161100--Sobic006G238100 Sobic002G209800 Sobic002G209800 Sobic009G161100--Sobic002G209800 Sobic009G161100--Sobic001G315200 Sobic009G009500--Sobic009G070800 Sobic009G009500--Sobic009G000900 Sobic006G103900 Sobic006G103900 Sobic009G009500--Sobic006G103900 Sobic009G009500--Sobic007G168000 Sobic003G355800 Sobic003G355800 Sobic009G009500--Sobic003G355800 Sobic009G009500--Sobic008G049200 Sobic009G009500--Sobic001G315200 Sobic009G009500--Sobic002G107000 Sobic009G009500--Sobic009G197300 Sobic008G189500--Sobic003G007800 Sobic008G189500--Sobic001G472000 Sobic008G189500--Sobic001G255300 Sobic008G189500--Sobic005G029400 Sobic008G189500--Sobic009G070600 Sobic004G328900 Sobic004G328900 Sobic008G189500--Sobic004G328900 Sobic003G317800 Sobic003G317800 Sobic008G189500--Sobic003G317800 Sobic001G379300 Sobic001G379300 Sobic008G189500--Sobic001G379300 Sobic002G128600 Sobic002G128600 Sobic008G189500--Sobic002G128600 Sobic002G107000--Sobic009G009500 Sobic002G107000--Sobic001G315200 Sobic002G107000--Sobic009G070800 Sobic002G107000--Sobic009G000900 Sobic002G107000--Sobic001G472000 Sobic002G107000--Sobic004G007500 Sobic004G151600 Sobic004G151600 Sobic002G107000--Sobic004G151600 Sobic002G107000--Sobic003G355800 Sobic002G107000--Sobic003G007800 Sobic009G000900--Sobic004G007500 Sobic009G000900--Sobic009G070800 Sobic009G000900--Sobic009G009500 Sobic001G161300 Sobic001G161300 Sobic009G000900--Sobic001G161300 Sobic009G000900--Sobic007G029000 Sobic001G276100 Sobic001G276100 Sobic009G000900--Sobic001G276100 Sobic009G000900--Sobic009G075100 Sobic009G000900--Sobic009G197300 Sobic004G343100 Sobic004G343100 Sobic009G000900--Sobic004G343100 Sobic003G007800--Sobic008G189500 Sobic003G007800--Sobic001G255300 Sobic005G190800 Sobic005G190800 Sobic003G007800--Sobic005G190800 Sobic006G175700 Sobic006G175700 Sobic003G007800--Sobic006G175700 Sobic003G007800--Sobic004G328900 Sobic003G007800--Sobic003G317800 Sobic003G007800--Sobic002G128600 Sobic003G007800--Sobic005G029400 Sobic004G038300 Sobic004G038300 Sobic003G007800--Sobic004G038300 Sobic004G007500--Sobic009G000900 Sobic004G007500--Sobic007G029000 Sobic004G007500--Sobic001G161300 Sobic004G007500--Sobic009G075100 Sobic001G448800 Sobic001G448800 Sobic004G007500--Sobic001G448800 Sobic004G007500--Sobic009G070800 Sobic004G007500--Sobic001G276100 Sobic001G281800 Sobic001G281800 Sobic004G007500--Sobic001G281800 Sobic003G106500 Sobic003G106500 Sobic004G007500--Sobic003G106500
Octagon: transcription factors


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