Gene annotation
Transcriptome id Sobic.009G082200.1
Synonym CRK10, RLK4, Sb09g007200
Functional annotation TKL_IRAK_DUF26-lc22 - DUF26 kinases have homology to DUF26 containing loci, expressed
UniProt C5YUT7
Pfam PF01657 PF00069
Panther DB PTHR27002 PTHR27002:SF96
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT4G23180 : cysteine-rich RLK (RECEPTOR-like protein kinase) 10
RAP-DB (Rice) LOC_Os07g35680.1 : TKL_IRAK_DUF26-lc22 - DUF26 kinases have homology to DUF26 containing loci, expressed
MaizeGDB (Corn) Zm00025a040512 , Zm00025a040511
Brachypodium -
Barley HORVU2Hr1G044270.7 , HORVU2Hr1G044270.6 , HORVU2Hr1G044270.5 , HORVU2Hr1G044270.4 , HORVU2Hr1G044270.3 , HORVU2Hr1G044270.2 , HORVU2Hr1G044270.9 , HORVU2Hr1G044270.8 , HORVU6Hr1G001580.2 , HORVU6Hr1G001580.1 , HORVU6Hr1G001580.4 , HORVU2Hr1G044270.12 , HORVU2Hr1G044270.11 , HORVU2Hr1G044270.10
Wheat TraesCS1B02G110600 , TraesCS6D02G013400 , TraesCS6D02G013400 , TraesCS1A02G100400 , TraesCS2A02G215900 , TraesCS6D02G013600 , TraesCS6D02G013600 , TraesCS6D02G013600 , TraesCS6A02G000500 , TraesCS2B02G240900 , TraesCS2B02G240900 , TraesCS1A02G100300 , TraesCS5B02G437300 , TraesCS2B02G240800 , TraesCS2B02G240800 , TraesCS2B02G240800 , TraesCS1D02G092400 , TraesCS5A02G434300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G088100 myristoyl-acyl carrier protein thioesterase, chloroplast precursor, putative, expressed K10781: fatty acyl-ACP thioesterase B
2 Sobic.002G040800 CAMK_CAMK_like.31 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
3 Sobic.009G154600 glycosyl hydrolases family 17, putative, expressed -
4 Sobic.005G008001 - -
5 Sobic.008G125600 - -
6 Sobic.001G377000 auxin-repressed protein, putative, expressed -
7 Sobic.002G273700 Upregulated in cold susceptible sorghum under stress(PubMedID : 26645959)@cytochrome P450, putative, expressed -
8 Sobic.001G031300 PPR repeat domain containing protein, putative, expressed -
9 Sobic.003G222300 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
10 Sobic.009G103600 MEE12, putative, expressed -
11 Sobic.001G423100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein K09562: HSPBP1, hsp70-interacting protein
12 Sobic.009G213400 mitochondrial carrier protein, putative, expressed K05863: SLC25A4S, solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31
13 Sobic.004G147200 - -
14 Sobic.008G001400 expressed protein -
15 Sobic.007G120401 - -
16 Sobic.006G263000 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed -
17 Sobic.009G107500 - -
18 Sobic.001G261597 - K07904: Ras-related protein Rab-11A
19 Sobic.006G042200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./middle senescence marker during developmental senescence(PubMedID : 27586543)@MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
20 Sobic.009G008100 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed -


Gene co-expression network
sample Sobic009G082200 Sobic009G082200 Sobic004G088100 Sobic004G088100 Sobic009G082200--Sobic004G088100 Sobic002G040800 Sobic002G040800 Sobic009G082200--Sobic002G040800 Sobic009G154600 Sobic009G154600 Sobic009G082200--Sobic009G154600 Sobic005G008001 Sobic005G008001 Sobic009G082200--Sobic005G008001 Sobic008G125600 Sobic008G125600 Sobic009G082200--Sobic008G125600 Sobic001G377000 Sobic001G377000 Sobic009G082200--Sobic001G377000 Sobic002G273700 Sobic002G273700 Sobic009G082200--Sobic002G273700 Sobic001G031300 Sobic001G031300 Sobic009G082200--Sobic001G031300 Sobic003G222300 Sobic003G222300 Sobic009G082200--Sobic003G222300 Sobic004G088100--Sobic009G082200 Sobic004G088100--Sobic008G125600 Sobic003G386600 Sobic003G386600 Sobic004G088100--Sobic003G386600 Sobic001G240800 Sobic001G240800 Sobic004G088100--Sobic001G240800 Sobic005G222900 Sobic005G222900 Sobic004G088100--Sobic005G222900 Sobic003G264901 Sobic003G264901 Sobic004G088100--Sobic003G264901 Sobic007G054100 Sobic007G054100 Sobic004G088100--Sobic007G054100 Sobic003G368800 Sobic003G368800 Sobic004G088100--Sobic003G368800 Sobic001G429300 Sobic001G429300 Sobic004G088100--Sobic001G429300 Sobic010G228700 Sobic010G228700 Sobic002G040800--Sobic010G228700 Sobic009G094800 Sobic009G094800 Sobic002G040800--Sobic009G094800 Sobic001G544500 Sobic001G544500 Sobic002G040800--Sobic001G544500 Sobic002G174900 Sobic002G174900 Sobic002G040800--Sobic002G174900 Sobic008G001400 Sobic008G001400 Sobic002G040800--Sobic008G001400 Sobic004G135300 Sobic004G135300 Sobic002G040800--Sobic004G135300 Sobic006G042200 Sobic006G042200 Sobic002G040800--Sobic006G042200 Sobic002G040800--Sobic003G368800 Sobic006G263000 Sobic006G263000 Sobic002G040800--Sobic006G263000 Sobic001G191200 Sobic001G191200 Sobic009G154600--Sobic001G191200 Sobic003G107300 Sobic003G107300 Sobic009G154600--Sobic003G107300 Sobic001G423100 Sobic001G423100 Sobic009G154600--Sobic001G423100 Sobic008G148400 Sobic008G148400 Sobic009G154600--Sobic008G148400 Sobic010G258300 Sobic010G258300 Sobic009G154600--Sobic010G258300 Sobic003G406700 Sobic003G406700 Sobic009G154600--Sobic003G406700 Sobic009G154600--Sobic003G222300 Sobic009G154600--Sobic001G031300 Sobic009G213400 Sobic009G213400 Sobic009G154600--Sobic009G213400 Sobic005G008001--Sobic009G082200 Sobic003G408400 Sobic003G408400 Sobic005G008001--Sobic003G408400 Sobic005G008001--Sobic001G377000 Sobic005G008001--Sobic009G154600 Sobic005G008001--Sobic009G213400 Sobic006G053700 Sobic006G053700 Sobic005G008001--Sobic006G053700 Sobic010G075700 Sobic010G075700 Sobic005G008001--Sobic010G075700 Sobic002G226000 Sobic002G226000 Sobic005G008001--Sobic002G226000 Sobic005G008001--Sobic001G031300 Sobic008G125501 Sobic008G125501 Sobic008G125600--Sobic008G125501 Sobic008G000900 Sobic008G000900 Sobic008G125600--Sobic008G000900 Sobic003G159450 Sobic003G159450 Sobic008G125600--Sobic003G159450 Sobic001G111900 Sobic001G111900 Sobic008G125600--Sobic001G111900 Sobic003G088700 Sobic003G088700 Sobic008G125600--Sobic003G088700 Sobic007G112900 Sobic007G112900 Sobic008G125600--Sobic007G112900 Sobic004G062800 Sobic004G062800 Sobic008G125600--Sobic004G062800 Sobic010G056000 Sobic010G056000 Sobic008G125600--Sobic010G056000 Sobic001G454401 Sobic001G454401 Sobic008G125600--Sobic001G454401 Sobic001G377000--Sobic001G191200 Sobic001G377000--Sobic009G213400 Sobic004G096300 Sobic004G096300 Sobic001G377000--Sobic004G096300 Sobic001G377000--Sobic003G406700 Sobic007G148200 Sobic007G148200 Sobic001G377000--Sobic007G148200 Sobic001G293800 Sobic001G293800 Sobic001G377000--Sobic001G293800 Sobic007G071000 Sobic007G071000 Sobic001G377000--Sobic007G071000 Sobic010G172200 Sobic010G172200 Sobic001G377000--Sobic010G172200 Sobic001G377000--Sobic003G264901 Sobic002G273700--Sobic007G054100 Sobic003G308700 Sobic003G308700 Sobic002G273700--Sobic003G308700 Sobic004G340700 Sobic004G340700 Sobic002G273700--Sobic004G340700 Sobic002G373100 Sobic002G373100 Sobic002G273700--Sobic002G373100 Sobic002G273700--Sobic002G040800 Sobic002G273700--Sobic008G001400 Sobic007G120401 Sobic007G120401 Sobic002G273700--Sobic007G120401 Sobic002G273700--Sobic009G082200 Sobic002G273700--Sobic006G042200 Sobic001G031300--Sobic010G258300 Sobic007G076700 Sobic007G076700 Sobic001G031300--Sobic007G076700 Sobic007G205600 Sobic007G205600 Sobic001G031300--Sobic007G205600 Sobic004G035000 Sobic004G035000 Sobic001G031300--Sobic004G035000 Sobic001G031300--Sobic009G154600 Sobic001G031300--Sobic003G222300 Sobic001G031300--Sobic001G377000 Sobic001G031300--Sobic001G191200 Sobic007G110200 Sobic007G110200 Sobic001G031300--Sobic007G110200 Sobic003G222300--Sobic010G258300 Sobic010G245100 Sobic010G245100 Sobic003G222300--Sobic010G245100 Sobic010G052500 Sobic010G052500 Sobic003G222300--Sobic010G052500 Sobic003G222300--Sobic009G213400 Sobic001G093600 Sobic001G093600 Sobic003G222300--Sobic001G093600 Sobic008G177850 Sobic008G177850 Sobic003G222300--Sobic008G177850 Sobic003G222300--Sobic009G154600 Sobic003G222300--Sobic001G031300 Sobic003G222300--Sobic003G107300
Octagon: transcription factors


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