Gene annotation
Transcriptome id Sobic.007G189500.1
Synonym Sb07g025930
Functional annotation -
UniProt C5YHP3
Pfam -
Panther DB PTHR31568
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G116800 expressed protein -
2 Sobic.001G101100 mitochondrial carrier protein, putative, expressed K15115: SLC25A32, solute carrier family 25 (mitochondrial folate transporter), member 32
3 Sobic.008G003900 - -
4 Sobic.004G119100 expressed protein -
5 Sobic.010G276900 - -
6 Sobic.010G080100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@integral membrane protein DUF6 containing protein, expressed -
7 Sobic.005G019600 rp3 protein, putative, expressed -
8 Sobic.009G233300 60S ribosomal protein L18a-1, putative, expressed -
9 Sobic.007G193700 Sua5/YciO/YrdC/YwlC family protein, putative, expressed -
10 Sobic.003G139900 "Highest expression level in embryo, up-regulation in roots in response to exogenous ABA and PEG"(PubMedID : 27501690)@OsSPL1 - SBP-box gene family member, expressed -
11 Sobic.001G372500 NAD dependent epimerase/dehydratase family protein, putative, expressed K01784: galE, UDP-glucose 4-epimerase
12 Sobic.010G079900 AT hook-containing DNA-binding protein, putative, expressed -
13 Sobic.001G050200 expressed protein -
14 Sobic.010G076300 - -
15 Sobic.004G006900 OsFBX49 - F-box domain containing protein, expressed -
16 Sobic.001G191600 TMS membrane protein/tumour differentially expressed protein, putative, expressed -
17 Sobic.001G474600 calmodulin-binding transcription activator, putative, expressed -
18 Sobic.009G010600 retinoblastoma-related protein-like, putative, expressed K04681: retinoblastoma-like protein 1
19 Sobic.002G310200 expressed protein -
20 Sobic.007G096000 expressed protein -


Gene co-expression network
sample Sobic007G189500 Sobic007G189500 Sobic002G116800 Sobic002G116800 Sobic007G189500--Sobic002G116800 Sobic001G101100 Sobic001G101100 Sobic007G189500--Sobic001G101100 Sobic008G003900 Sobic008G003900 Sobic007G189500--Sobic008G003900 Sobic004G119100 Sobic004G119100 Sobic007G189500--Sobic004G119100 Sobic010G276900 Sobic010G276900 Sobic007G189500--Sobic010G276900 Sobic010G080100 Sobic010G080100 Sobic007G189500--Sobic010G080100 Sobic005G019600 Sobic005G019600 Sobic007G189500--Sobic005G019600 Sobic009G233300 Sobic009G233300 Sobic007G189500--Sobic009G233300 Sobic007G193700 Sobic007G193700 Sobic007G189500--Sobic007G193700 Sobic002G116800--Sobic007G189500 Sobic006G213500 Sobic006G213500 Sobic002G116800--Sobic006G213500 Sobic002G140700 Sobic002G140700 Sobic002G116800--Sobic002G140700 Sobic002G116800--Sobic008G003900 Sobic004G238900 Sobic004G238900 Sobic002G116800--Sobic004G238900 Sobic007G161800 Sobic007G161800 Sobic002G116800--Sobic007G161800 Sobic001G261200 Sobic001G261200 Sobic002G116800--Sobic001G261200 Sobic010G168301 Sobic010G168301 Sobic002G116800--Sobic010G168301 Sobic009G094900 Sobic009G094900 Sobic002G116800--Sobic009G094900 Sobic004G004200 Sobic004G004200 Sobic001G101100--Sobic004G004200 Sobic010G232600 Sobic010G232600 Sobic001G101100--Sobic010G232600 Sobic009G010600 Sobic009G010600 Sobic001G101100--Sobic009G010600 Sobic004G004300 Sobic004G004300 Sobic001G101100--Sobic004G004300 Sobic001G281100 Sobic001G281100 Sobic001G101100--Sobic001G281100 Sobic008G110600 Sobic008G110600 Sobic001G101100--Sobic008G110600 Sobic006G052800 Sobic006G052800 Sobic001G101100--Sobic006G052800 Sobic006G126100 Sobic006G126100 Sobic001G101100--Sobic006G126100 Sobic004G178200 Sobic004G178200 Sobic001G101100--Sobic004G178200 Sobic008G003900--Sobic007G189500 Sobic008G003900--Sobic002G116800 Sobic007G010000 Sobic007G010000 Sobic008G003900--Sobic007G010000 Sobic007G105400 Sobic007G105400 Sobic008G003900--Sobic007G105400 Sobic002G273700 Sobic002G273700 Sobic008G003900--Sobic002G273700 Sobic008G003900--Sobic006G213500 Sobic008G003900--Sobic001G101100 Sobic009G008100 Sobic009G008100 Sobic008G003900--Sobic009G008100 Sobic003G086900 Sobic003G086900 Sobic008G003900--Sobic003G086900 Sobic001G253700 Sobic001G253700 Sobic004G119100--Sobic001G253700 Sobic006G034000 Sobic006G034000 Sobic004G119100--Sobic006G034000 Sobic006G119800 Sobic006G119800 Sobic004G119100--Sobic006G119800 Sobic003G233600 Sobic003G233600 Sobic004G119100--Sobic003G233600 Sobic001G000200 Sobic001G000200 Sobic004G119100--Sobic001G000200 Sobic010G205800 Sobic010G205800 Sobic004G119100--Sobic010G205800 Sobic003G169600 Sobic003G169600 Sobic004G119100--Sobic003G169600 Sobic007G007000 Sobic007G007000 Sobic004G119100--Sobic007G007000 Sobic010G090900 Sobic010G090900 Sobic004G119100--Sobic010G090900 Sobic004G351100 Sobic004G351100 Sobic010G276900--Sobic004G351100 Sobic001G291000 Sobic001G291000 Sobic010G276900--Sobic001G291000 Sobic001G091400 Sobic001G091400 Sobic010G276900--Sobic001G091400 Sobic007G207000 Sobic007G207000 Sobic010G276900--Sobic007G207000 Sobic010G118950 Sobic010G118950 Sobic010G276900--Sobic010G118950 Sobic002G299700 Sobic002G299700 Sobic010G276900--Sobic002G299700 Sobic002G275600 Sobic002G275600 Sobic010G276900--Sobic002G275600 Sobic010G276900--Sobic009G010600 Sobic001G474600 Sobic001G474600 Sobic010G276900--Sobic001G474600 Sobic001G507300 Sobic001G507300 Sobic010G080100--Sobic001G507300 Sobic010G080100--Sobic007G189500 Sobic008G009900 Sobic008G009900 Sobic010G080100--Sobic008G009900 Sobic009G126900 Sobic009G126900 Sobic010G080100--Sobic009G126900 Sobic004G053700 Sobic004G053700 Sobic010G080100--Sobic004G053700 Sobic002G217400 Sobic002G217400 Sobic010G080100--Sobic002G217400 Sobic003G407300 Sobic003G407300 Sobic010G080100--Sobic003G407300 Sobic010G043400 Sobic010G043400 Sobic010G080100--Sobic010G043400 Sobic003G322700 Sobic003G322700 Sobic010G080100--Sobic003G322700 Sobic009G221000 Sobic009G221000 Sobic005G019600--Sobic009G221000 Sobic002G161900 Sobic002G161900 Sobic005G019600--Sobic002G161900 Sobic002G173000 Sobic002G173000 Sobic005G019600--Sobic002G173000 Sobic005G032800 Sobic005G032800 Sobic005G019600--Sobic005G032800 Sobic006G128900 Sobic006G128900 Sobic005G019600--Sobic006G128900 Sobic005G019600--Sobic001G474600 Sobic003G113200 Sobic003G113200 Sobic005G019600--Sobic003G113200 Sobic001G028900 Sobic001G028900 Sobic005G019600--Sobic001G028900 Sobic008G024600 Sobic008G024600 Sobic005G019600--Sobic008G024600 Sobic006G273200 Sobic006G273200 Sobic009G233300--Sobic006G273200 Sobic008G165700 Sobic008G165700 Sobic009G233300--Sobic008G165700 Sobic002G187801 Sobic002G187801 Sobic009G233300--Sobic002G187801 Sobic009G233300--Sobic006G119800 Sobic001G387600 Sobic001G387600 Sobic009G233300--Sobic001G387600 Sobic001G372500 Sobic001G372500 Sobic009G233300--Sobic001G372500 Sobic001G284800 Sobic001G284800 Sobic009G233300--Sobic001G284800 Sobic003G309900 Sobic003G309900 Sobic009G233300--Sobic003G309900 Sobic003G176600 Sobic003G176600 Sobic009G233300--Sobic003G176600 Sobic004G263600 Sobic004G263600 Sobic007G193700--Sobic004G263600 Sobic007G193700--Sobic003G086900 Sobic004G200200 Sobic004G200200 Sobic007G193700--Sobic004G200200 Sobic004G174200 Sobic004G174200 Sobic007G193700--Sobic004G174200 Sobic002G134200 Sobic002G134200 Sobic007G193700--Sobic002G134200 Sobic010G239600 Sobic010G239600 Sobic007G193700--Sobic010G239600 Sobic003G139900 Sobic003G139900 Sobic007G193700--Sobic003G139900 Sobic003G247500 Sobic003G247500 Sobic007G193700--Sobic003G247500 Sobic003G396200 Sobic003G396200 Sobic007G193700--Sobic003G396200
Octagon: transcription factors


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