Gene annotation
Transcriptome id Sobic.005G182200.2
Synonym Sb05g024070, RPS3, RPM1
Functional annotation NBS-LRR disease resistance protein, putative, expressed
UniProt A0A1Z5RK33
Pfam PF00931
Panther DB PTHR23155 PTHR23155:SF495
NCBI CDD -
KEGG Orthology K13457; RPM1, disease resistance protein RPM1
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G07040 : NB-ARC domain-containing disease resistance protein
RAP-DB (Rice) LOC_Os11g39160.1 : NBS-LRR disease resistance protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS2D02G310900 , TraesCS7A02G006200 , TraesCS7A02G004400 , TraesCS7D02G007600 , TraesCS2B02G329400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G017600 protein of unknown function containing protein, expressed -
2 Sobic.001G498200 YT521-B-like family domain containing protein, expressed -
3 Sobic.007G031800 expressed protein -
4 Sobic.004G285800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transmembrane amino acid transporter protein, putative, expressed K14209: SLC36A, solute carrier family 36 (proton-coupled amino acid transporter)
5 Sobic.009G225200 expressed protein -
6 Sobic.010G256932 - -
7 Sobic.009G117300 protein kinase APK1B, chloroplast precursor, putative, expressed -
8 Sobic.002G188500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@trehalose-6-phosphate synthase, putative, expressed K16055: trehalose 6-phosphate synthase/phosphatase
9 Sobic.010G057400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@uncharacterized glycosyltransferase, putative, expressed K06617: raffinose synthase
10 Sobic.001G087100 far-red light perception and signal transduction(PubMedID : 14963106)@phytochrome C, putative, expressed -
11 Sobic.009G117400 protein kinase domain containing protein, expressed -
12 Sobic.002G076000 transporter-related, putative, expressed -
13 Sobic.010G248600 - -
14 Sobic.009G064766 - -
15 Sobic.010G256800 - -
16 Sobic.010G057300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@uncharacterized glycosyltransferase, putative, expressed K06617: raffinose synthase
17 Sobic.005G015100 OsFBX291 - F-box domain containing protein, expressed -
18 Sobic.007G129401 - -
19 Sobic.009G235900 transporter family protein, putative, expressed K08145: SLC2A8, MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 8
20 Sobic.010G021000 expressed protein -


Gene co-expression network
sample Sobic005G182200 Sobic005G182200 Sobic001G017600 Sobic001G017600 Sobic005G182200--Sobic001G017600 Sobic001G498200 Sobic001G498200 Sobic005G182200--Sobic001G498200 Sobic007G031800 Sobic007G031800 Sobic005G182200--Sobic007G031800 Sobic004G285800 Sobic004G285800 Sobic005G182200--Sobic004G285800 Sobic009G225200 Sobic009G225200 Sobic005G182200--Sobic009G225200 Sobic010G256932 Sobic010G256932 Sobic005G182200--Sobic010G256932 Sobic009G117300 Sobic009G117300 Sobic005G182200--Sobic009G117300 Sobic002G188500 Sobic002G188500 Sobic005G182200--Sobic002G188500 Sobic010G057400 Sobic010G057400 Sobic005G182200--Sobic010G057400 Sobic008G133400 Sobic008G133400 Sobic001G017600--Sobic008G133400 Sobic008G083000 Sobic008G083000 Sobic001G017600--Sobic008G083000 Sobic007G061700 Sobic007G061700 Sobic001G017600--Sobic007G061700 Sobic001G017600--Sobic005G182200 Sobic009G257800 Sobic009G257800 Sobic001G017600--Sobic009G257800 Sobic003G442000 Sobic003G442000 Sobic001G017600--Sobic003G442000 Sobic010G256800 Sobic010G256800 Sobic001G017600--Sobic010G256800 Sobic001G017600--Sobic001G498200 Sobic002G158700 Sobic002G158700 Sobic001G017600--Sobic002G158700 Sobic004G256600 Sobic004G256600 Sobic001G498200--Sobic004G256600 Sobic001G028900 Sobic001G028900 Sobic001G498200--Sobic001G028900 Sobic010G248600 Sobic010G248600 Sobic001G498200--Sobic010G248600 Sobic010G270300 Sobic010G270300 Sobic001G498200--Sobic010G270300 Sobic003G113200 Sobic003G113200 Sobic001G498200--Sobic003G113200 Sobic005G015100 Sobic005G015100 Sobic001G498200--Sobic005G015100 Sobic006G128900 Sobic006G128900 Sobic001G498200--Sobic006G128900 Sobic001G498200--Sobic009G117300 Sobic001G498200--Sobic007G031800 Sobic007G031800--Sobic009G117300 Sobic009G117400 Sobic009G117400 Sobic007G031800--Sobic009G117400 Sobic007G071950 Sobic007G071950 Sobic007G031800--Sobic007G071950 Sobic007G031800--Sobic001G498200 Sobic007G031800--Sobic009G225200 Sobic005G173366 Sobic005G173366 Sobic007G031800--Sobic005G173366 Sobic003G258900 Sobic003G258900 Sobic007G031800--Sobic003G258900 Sobic007G129401 Sobic007G129401 Sobic007G031800--Sobic007G129401 Sobic001G464200 Sobic001G464200 Sobic007G031800--Sobic001G464200 Sobic010G057300 Sobic010G057300 Sobic004G285800--Sobic010G057300 Sobic005G085200 Sobic005G085200 Sobic004G285800--Sobic005G085200 Sobic009G159700 Sobic009G159700 Sobic004G285800--Sobic009G159700 Sobic005G085600 Sobic005G085600 Sobic004G285800--Sobic005G085600 Sobic001G078200 Sobic001G078200 Sobic004G285800--Sobic001G078200 Sobic009G180100 Sobic009G180100 Sobic004G285800--Sobic009G180100 Sobic001G363100 Sobic001G363100 Sobic004G285800--Sobic001G363100 Sobic001G379600 Sobic001G379600 Sobic004G285800--Sobic001G379600 Sobic004G285800--Sobic010G057400 Sobic009G225200--Sobic009G117300 Sobic009G225200--Sobic009G117400 Sobic009G225200--Sobic005G015100 Sobic001G043900 Sobic001G043900 Sobic009G225200--Sobic001G043900 Sobic009G225200--Sobic003G258900 Sobic004G271900 Sobic004G271900 Sobic009G225200--Sobic004G271900 Sobic004G348100 Sobic004G348100 Sobic009G225200--Sobic004G348100 Sobic009G225200--Sobic003G442000 Sobic009G015800 Sobic009G015800 Sobic009G225200--Sobic009G015800 Sobic010G021000 Sobic010G021000 Sobic010G256932--Sobic010G021000 Sobic010G256932--Sobic010G256800 Sobic002G301500 Sobic002G301500 Sobic010G256932--Sobic002G301500 Sobic010G256932--Sobic001G017600 Sobic010G256932--Sobic008G133400 Sobic010G256932--Sobic007G031800 Sobic010G256932--Sobic005G182200 Sobic009G178300 Sobic009G178300 Sobic010G256932--Sobic009G178300 Sobic010G256932--Sobic002G188500 Sobic009G117300--Sobic009G117400 Sobic009G117300--Sobic004G271900 Sobic009G117300--Sobic009G225200 Sobic010G263800 Sobic010G263800 Sobic009G117300--Sobic010G263800 Sobic004G057400 Sobic004G057400 Sobic009G117300--Sobic004G057400 Sobic008G034600 Sobic008G034600 Sobic009G117300--Sobic008G034600 Sobic006G209500 Sobic006G209500 Sobic009G117300--Sobic006G209500 Sobic009G117300--Sobic004G256600 Sobic007G205800 Sobic007G205800 Sobic009G117300--Sobic007G205800 Sobic009G235900 Sobic009G235900 Sobic002G188500--Sobic009G235900 Sobic003G005800 Sobic003G005800 Sobic002G188500--Sobic003G005800 Sobic004G037900 Sobic004G037900 Sobic002G188500--Sobic004G037900 Sobic002G188500--Sobic001G498200 Sobic001G194900 Sobic001G194900 Sobic002G188500--Sobic001G194900 Sobic006G138400 Sobic006G138400 Sobic002G188500--Sobic006G138400 Sobic003G145900 Sobic003G145900 Sobic002G188500--Sobic003G145900 Sobic008G160700 Sobic008G160700 Sobic002G188500--Sobic008G160700 Sobic001G490000 Sobic001G490000 Sobic002G188500--Sobic001G490000 Sobic004G345900 Sobic004G345900 Sobic010G057400--Sobic004G345900 Sobic010G057400--Sobic010G057300 Sobic010G057400--Sobic005G085200 Sobic004G199600 Sobic004G199600 Sobic010G057400--Sobic004G199600 Sobic010G057400--Sobic010G270300 Sobic007G189800 Sobic007G189800 Sobic010G057400--Sobic007G189800 Sobic001G277000 Sobic001G277000 Sobic010G057400--Sobic001G277000 Sobic010G146200 Sobic010G146200 Sobic010G057400--Sobic010G146200 Sobic009G078500 Sobic009G078500 Sobic010G057400--Sobic009G078500
Octagon: transcription factors


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