Gene annotation
Transcriptome id Sobic.003G221200.1
Synonym Sb03g027960, emb2742
Functional annotation CTP synthase, putative, expressed
UniProt C5XR23
Pfam PF07722 PF06418
Panther DB PTHR11550 PTHR11550:SF6
NCBI CDD -
KEGG Orthology K01937; pyrG, CTP synthase
Gene Ontology GO:0016787; hydrolase activity GO:0006541glutamine metabolic process GO:0006221pyrimidine nucleotide biosynthetic process GO:0003883CTP synthase activity


Orthologs (automatic annotation)
TAIR AT3G12670 : CTP synthase family protein
RAP-DB (Rice) LOC_Os01g43020.1 : CTP synthase, putative, expressed
MaizeGDB (Corn) Zm00025a028748 , Zm00025a038527
Brachypodium PNT70676 , KQK09000 , KQK09001 , KQK09002 , KQK04626 , KQK04764 , KQK08735 , KQK08734
Barley HORVU1Hr1G093240.13 , HORVU1Hr1G093240.11 , HORVU1Hr1G093240.10 , HORVU1Hr1G093240.12 , HORVU1Hr1G093240.15 , HORVU1Hr1G093240.14 , HORVU1Hr1G093240.17 , HORVU1Hr1G093240.16 , HORVU1Hr1G093240.19 , HORVU1Hr1G093240.18 , HORVU1Hr1G093240.42 , HORVU1Hr1G093240.40 , HORVU1Hr1G093240.41 , HORVU1Hr1G093240.5 , HORVU1Hr1G093240.4 , HORVU1Hr1G093240.7 , HORVU1Hr1G093240.6 , HORVU1Hr1G093240.1 , HORVU1Hr1G093240.3 , HORVU1Hr1G093240.2 , HORVU1Hr1G093240.9 , HORVU1Hr1G093240.8 , HORVU1Hr1G093240.39 , HORVU1Hr1G093240.38 , HORVU1Hr1G093240.37 , HORVU1Hr1G093240.36 , HORVU1Hr1G093240.34 , HORVU1Hr1G093240.33 , HORVU1Hr1G093240.35 , HORVU1Hr1G093240.31 , HORVU1Hr1G093240.30 , HORVU1Hr1G093240.32 , HORVU1Hr1G093240.28 , HORVU1Hr1G093240.29 , HORVU1Hr1G093240.24 , HORVU1Hr1G093240.25 , HORVU1Hr1G093240.26 , HORVU1Hr1G093240.27 , HORVU1Hr1G093240.20 , HORVU1Hr1G093240.21 , HORVU1Hr1G093240.22 , HORVU1Hr1G093240.23
Wheat TraesCS3D02G231000 , TraesCS3A02G222100 , TraesCS1B02G462000 , TraesCS1A02G427100 , TraesCS3B02G252000 , TraesCS1D02G436900 , TraesCS3B02G252000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G003200 sugar-responsive gene(PubMedID : 25496467)@asparagine synthetase, putative, expressed K01953: asnB, asparagine synthase (glutamine-hydrolysing)
2 Sobic.009G231300 drought induced 19 protein, putative, expressed -
3 Sobic.005G130100 terpene synthase, putative, expressed K15803: (-)-germacrene D synthase
4 Sobic.001G363100 universal stress protein domain containing protein, putative, expressed -
5 Sobic.006G249000 cysteine-rich receptor-like protein kinase 8 precursor, putative, expressed K04733: interleukin-1 receptor-associated kinase 4
6 Sobic.009G078500 GDSL-like lipase/acylhydrolase, putative, expressed -
7 Sobic.003G258400 splicing factor-related, putative, expressed -
8 Sobic.010G270300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@rhodanese-like domain containing protein, putative, expressed -
9 Sobic.010G050600 - -
10 Sobic.010G146200 homeobox associated leucine zipper, putative, expressed -
11 Sobic.009G180200 SNF1-related protein kinase regulatory subunit beta-1, putative, expressed K07199: 5'-AMP-activated protein kinase, regulatory beta subunit
12 Sobic.001G464200 flap endonuclease, putative, expressed K10846: ERCC5, XPG, DNA excision repair protein ERCC-5
13 Sobic.004G199600 DUF581 domain containing protein, expressed -
14 Sobic.010G263800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized protein(PubMedID : 28640841)@UPF0183 protein, putative, expressed -
15 Sobic.009G064766 - -
16 Sobic.009G109450 - -
17 Sobic.002G108600 OsFBLD8 - F-box, LRR and FBD domain containing protein, expressed -
18 Sobic.007G189800 B-box (BBX) protein(PubMedID : 30626335)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCT/B-box zinc finger protein, putative, expressed -
19 Sobic.002G077200 expressed protein -
20 Sobic.004G271900 RMD5 homolog A, putative, expressed -


Gene co-expression network
sample Sobic003G221200 Sobic003G221200 Sobic005G003200 Sobic005G003200 Sobic003G221200--Sobic005G003200 Sobic009G231300 Sobic009G231300 Sobic003G221200--Sobic009G231300 Sobic005G130100 Sobic005G130100 Sobic003G221200--Sobic005G130100 Sobic001G363100 Sobic001G363100 Sobic003G221200--Sobic001G363100 Sobic006G249000 Sobic006G249000 Sobic003G221200--Sobic006G249000 Sobic009G078500 Sobic009G078500 Sobic003G221200--Sobic009G078500 Sobic003G258400 Sobic003G258400 Sobic003G221200--Sobic003G258400 Sobic010G270300 Sobic010G270300 Sobic003G221200--Sobic010G270300 Sobic010G050600 Sobic010G050600 Sobic003G221200--Sobic010G050600 Sobic005G003200--Sobic006G249000 Sobic005G003200--Sobic001G363100 Sobic005G003200--Sobic005G130100 Sobic005G003200--Sobic009G231300 Sobic010G146200 Sobic010G146200 Sobic005G003200--Sobic010G146200 Sobic005G003200--Sobic010G050600 Sobic007G189800 Sobic007G189800 Sobic005G003200--Sobic007G189800 Sobic005G003200--Sobic009G078500 Sobic007G156500 Sobic007G156500 Sobic005G003200--Sobic007G156500 Sobic009G231300--Sobic005G130100 Sobic009G180200 Sobic009G180200 Sobic009G231300--Sobic009G180200 Sobic009G109450 Sobic009G109450 Sobic009G231300--Sobic009G109450 Sobic009G231300--Sobic009G078500 Sobic009G231300--Sobic007G156500 Sobic009G231300--Sobic005G003200 Sobic009G231300--Sobic003G258400 Sobic004G199600 Sobic004G199600 Sobic009G231300--Sobic004G199600 Sobic009G231300--Sobic010G050600 Sobic005G130100--Sobic009G078500 Sobic005G130100--Sobic009G231300 Sobic005G130100--Sobic010G146200 Sobic005G130100--Sobic004G199600 Sobic005G130100--Sobic009G109450 Sobic005G130100--Sobic009G180200 Sobic005G130100--Sobic010G050600 Sobic005G130100--Sobic005G003200 Sobic005G130100--Sobic006G249000 Sobic001G363100--Sobic009G180200 Sobic001G363100--Sobic005G003200 Sobic001G363100--Sobic006G249000 Sobic001G363100--Sobic009G078500 Sobic001G363100--Sobic004G199600 Sobic001G363100--Sobic005G130100 Sobic001G363100--Sobic010G146200 Sobic005G085600 Sobic005G085600 Sobic001G363100--Sobic005G085600 Sobic004G221900 Sobic004G221900 Sobic001G363100--Sobic004G221900 Sobic006G249000--Sobic005G003200 Sobic006G249000--Sobic005G130100 Sobic006G249000--Sobic010G050600 Sobic006G249000--Sobic001G363100 Sobic006G249000--Sobic010G146200 Sobic006G249000--Sobic009G231300 Sobic006G249000--Sobic007G189800 Sobic006G249000--Sobic009G078500 Sobic006G249000--Sobic007G156500 Sobic009G078500--Sobic004G199600 Sobic009G078500--Sobic005G130100 Sobic009G078500--Sobic009G109450 Sobic009G078500--Sobic009G180200 Sobic009G078500--Sobic009G231300 Sobic009G078500--Sobic010G146200 Sobic009G078500--Sobic001G363100 Sobic009G064766 Sobic009G064766 Sobic009G078500--Sobic009G064766 Sobic003G176100 Sobic003G176100 Sobic009G078500--Sobic003G176100 Sobic002G077200 Sobic002G077200 Sobic003G258400--Sobic002G077200 Sobic004G256600 Sobic004G256600 Sobic003G258400--Sobic004G256600 Sobic009G087800 Sobic009G087800 Sobic003G258400--Sobic009G087800 Sobic003G258400--Sobic009G231300 Sobic003G258400--Sobic009G180200 Sobic004G271900 Sobic004G271900 Sobic003G258400--Sobic004G271900 Sobic007G205800 Sobic007G205800 Sobic003G258400--Sobic007G205800 Sobic003G093600 Sobic003G093600 Sobic003G258400--Sobic003G093600 Sobic009G110366 Sobic009G110366 Sobic003G258400--Sobic009G110366 Sobic010G270300--Sobic005G130100 Sobic010G270300--Sobic009G064766 Sobic010G270300--Sobic009G078500 Sobic010G057300 Sobic010G057300 Sobic010G270300--Sobic010G057300 Sobic010G270300--Sobic004G199600 Sobic010G057400 Sobic010G057400 Sobic010G270300--Sobic010G057400 Sobic004G345900 Sobic004G345900 Sobic010G270300--Sobic004G345900 Sobic005G085200 Sobic005G085200 Sobic010G270300--Sobic005G085200 Sobic010G270300--Sobic010G146200 Sobic010G050600--Sobic010G146200 Sobic009G113600 Sobic009G113600 Sobic010G050600--Sobic009G113600 Sobic010G050600--Sobic003G176100 Sobic010G050600--Sobic005G130100 SobicK024000 SobicK024000 Sobic010G050600--SobicK024000 Sobic008G031350 Sobic008G031350 Sobic010G050600--Sobic008G031350 Sobic010G050600--Sobic006G249000 Sobic007G059300 Sobic007G059300 Sobic010G050600--Sobic007G059300 Sobic002G108800 Sobic002G108800 Sobic010G050600--Sobic002G108800
Octagon: transcription factors


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