Gene annotation
Transcriptome id Sobic.003G395400.2,Sobic.003G395400.1,Sobic.003G395400.3
Synonym Sb03g043250, BT1
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence (PubMedID : 27586543)
BTBZ2 - Bric-a-Brac, Tramtrack, and Broad Complex BTB domain with TAZ zinc finger and Calmodulin-binding domains, expressed
UniProt C5XFI9 , A0A1W0W147 , A0A1W0W121
Pfam PF00651 PF00651 PF02135
Panther DB PTHR24413 PTHR24413:SF127
NCBI CDD KOG1778; CREB binding protein/P300 and related TAZ Zn-finger proteins
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0005515protein binding GO:0008270zinc ion binding GO:0006355regulation of transcription, DNA-templated GO:0005634nucleus GO:0004402histone acetyltransferase activity GO:0003712transcription coregulator activity


Orthologs (automatic annotation)
TAIR AT5G63160 : BTB and TAZ domain protein 1
RAP-DB (Rice) LOC_Os01g68020.1 : BTBZ2 - Bric-a-Brac, Tramtrack, and Broad Complex BTB domain with TAZ zinc finger and Calmodulin-binding domains, expressed
MaizeGDB (Corn) Zm00025a026357
Brachypodium KQK11109
Barley HORVU3Hr1G092090.1 , HORVU3Hr1G092090.3 , HORVU3Hr1G092090.2 , HORVU3Hr1G092010.1 , HORVU3Hr1G092010.2
Wheat TraesCS3B02G448100 , TraesCS3A02G413600 , TraesCS3D02G408000 , TraesCS3D02G408000 , TraesCS3B02G448000 , TraesCS3A02G413700 , TraesCS3D02G408100
Populus -


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cDNA sequences
Sobic.003G395400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G225200 expressed protein -
2 Sobic.007G126100 trehalose-6-phosphate synthase, putative, expressed K16055: trehalose 6-phosphate synthase/phosphatase
3 Sobic.006G157500 zinc finger, C3HC4 type domain containing protein, expressed K10666: E3 ubiquitin-protein ligase RNF5
4 Sobic.006G206000 WRKY68, expressed -
5 Sobic.003G360000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@transferase family protein, putative, expressed -
6 Sobic.002G254200 expressed protein -
7 Sobic.007G197600 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
8 Sobic.003G265200 B3 DNA binding domain containing protein, expressed K09287: RAV-like factor
9 Sobic.002G330000 core histone H2A/H2B/H3/H4, putative, expressed K11251: histone H2A
10 Sobic.007G177100 "Syntelog of ZmMYB42, bind to the COMT1, CSE, 4CL2, F5H, and SbMYB42 promroter region"(PubMedID : 30387379)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
11 Sobic.006G241400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -
12 Sobic.010G259900 ribosomal protein L7Ae, putative, expressed K02908: RP-L30e, large subunit ribosomal protein L30e
13 Sobic.010G135000 thioredoxin reductase 2, putative, expressed K00384: trxB, thioredoxin reductase (NADPH)
14 Sobic.004G212900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@B4-BTB1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with B4 subfamily conserved sequence, expressed -
15 Sobic.001G225300 - -
16 Sobic.006G269200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@stem-specific protein TSJT1, putative, expressed -
17 Sobic.010G030401 - -
18 Sobic.010G237000 coiled-coil domain-containing protein 72, putative, expressed -
19 Sobic.009G016201 - K09481: SEC61B, protein transport protein SEC61 subunit beta
20 Sobic.006G241600 expressed protein -


Gene co-expression network
sample Sobic003G395400 Sobic003G395400 Sobic001G225200 Sobic001G225200 Sobic003G395400--Sobic001G225200 Sobic007G126100 Sobic007G126100 Sobic003G395400--Sobic007G126100 Sobic006G157500 Sobic006G157500 Sobic003G395400--Sobic006G157500 Sobic006G206000 Sobic006G206000 Sobic003G395400--Sobic006G206000 Sobic003G360000 Sobic003G360000 Sobic003G395400--Sobic003G360000 Sobic002G254200 Sobic002G254200 Sobic003G395400--Sobic002G254200 Sobic007G197600 Sobic007G197600 Sobic003G395400--Sobic007G197600 Sobic003G265200 Sobic003G265200 Sobic003G395400--Sobic003G265200 Sobic002G330000 Sobic002G330000 Sobic003G395400--Sobic002G330000 Sobic001G225300 Sobic001G225300 Sobic001G225200--Sobic001G225300 Sobic001G225200--Sobic002G254200 Sobic001G225200--Sobic006G157500 Sobic006G191600 Sobic006G191600 Sobic001G225200--Sobic006G191600 Sobic003G406900 Sobic003G406900 Sobic001G225200--Sobic003G406900 Sobic006G269200 Sobic006G269200 Sobic001G225200--Sobic006G269200 Sobic007G177100 Sobic007G177100 Sobic001G225200--Sobic007G177100 Sobic006G154500 Sobic006G154500 Sobic001G225200--Sobic006G154500 Sobic001G225200--Sobic003G265200 Sobic007G126100--Sobic007G177100 Sobic004G212900 Sobic004G212900 Sobic007G126100--Sobic004G212900 Sobic002G421600 Sobic002G421600 Sobic007G126100--Sobic002G421600 Sobic007G126100--Sobic002G254200 Sobic009G016201 Sobic009G016201 Sobic007G126100--Sobic009G016201 Sobic009G159200 Sobic009G159200 Sobic007G126100--Sobic009G159200 Sobic004G172700 Sobic004G172700 Sobic007G126100--Sobic004G172700 Sobic007G126100--Sobic006G157500 Sobic002G282400 Sobic002G282400 Sobic007G126100--Sobic002G282400 Sobic009G168900 Sobic009G168900 Sobic006G157500--Sobic009G168900 Sobic006G157500--Sobic003G265200 Sobic002G339100 Sobic002G339100 Sobic006G157500--Sobic002G339100 Sobic003G260300 Sobic003G260300 Sobic006G157500--Sobic003G260300 Sobic001G477600 Sobic001G477600 Sobic006G157500--Sobic001G477600 Sobic001G318700 Sobic001G318700 Sobic006G157500--Sobic001G318700 Sobic009G184000 Sobic009G184000 Sobic006G157500--Sobic009G184000 Sobic004G109900 Sobic004G109900 Sobic006G157500--Sobic004G109900 Sobic001G112200 Sobic001G112200 Sobic006G157500--Sobic001G112200 Sobic002G302500 Sobic002G302500 Sobic006G206000--Sobic002G302500 Sobic001G234800 Sobic001G234800 Sobic006G206000--Sobic001G234800 Sobic009G074100 Sobic009G074100 Sobic006G206000--Sobic009G074100 Sobic006G158266 Sobic006G158266 Sobic006G206000--Sobic006G158266 Sobic002G326100 Sobic002G326100 Sobic006G206000--Sobic002G326100 Sobic001G367600 Sobic001G367600 Sobic006G206000--Sobic001G367600 Sobic006G206000--Sobic006G157500 Sobic009G230100 Sobic009G230100 Sobic006G206000--Sobic009G230100 Sobic002G327300 Sobic002G327300 Sobic006G206000--Sobic002G327300 Sobic003G360000--Sobic007G197600 Sobic003G360000--Sobic006G157500 Sobic003G360000--Sobic002G330000 Sobic001G247300 Sobic001G247300 Sobic003G360000--Sobic001G247300 Sobic003G360000--Sobic003G265200 Sobic005G196800 Sobic005G196800 Sobic003G360000--Sobic005G196800 Sobic009G069700 Sobic009G069700 Sobic003G360000--Sobic009G069700 Sobic008G139600 Sobic008G139600 Sobic003G360000--Sobic008G139600 Sobic003G048000 Sobic003G048000 Sobic003G360000--Sobic003G048000 Sobic002G254200--Sobic001G225200 Sobic002G254200--Sobic001G225300 Sobic002G254200--Sobic006G269200 Sobic002G254200--Sobic006G154500 Sobic002G254200--Sobic007G177100 Sobic002G254200--Sobic006G191600 Sobic002G254200--Sobic009G159200 Sobic002G254200--Sobic006G157500 Sobic002G254200--Sobic007G126100 Sobic007G197600--Sobic009G159200 Sobic007G197600--Sobic008G139600 Sobic007G008100 Sobic007G008100 Sobic007G197600--Sobic007G008100 Sobic010G259900 Sobic010G259900 Sobic007G197600--Sobic010G259900 Sobic004G321300 Sobic004G321300 Sobic007G197600--Sobic004G321300 Sobic007G197600--Sobic006G157500 Sobic007G197600--Sobic003G360000 Sobic002G323300 Sobic002G323300 Sobic007G197600--Sobic002G323300 Sobic004G203700 Sobic004G203700 Sobic007G197600--Sobic004G203700 Sobic003G265200--Sobic006G157500 Sobic003G265200--Sobic003G260300 Sobic002G328400 Sobic002G328400 Sobic003G265200--Sobic002G328400 Sobic001G431500 Sobic001G431500 Sobic003G265200--Sobic001G431500 Sobic002G336600 Sobic002G336600 Sobic003G265200--Sobic002G336600 Sobic001G259900 Sobic001G259900 Sobic003G265200--Sobic001G259900 Sobic003G265200--Sobic009G184000 Sobic003G228900 Sobic003G228900 Sobic003G265200--Sobic003G228900 Sobic003G043600 Sobic003G043600 Sobic003G265200--Sobic003G043600 Sobic004G145801 Sobic004G145801 Sobic002G330000--Sobic004G145801 Sobic003G321700 Sobic003G321700 Sobic002G330000--Sobic003G321700 Sobic007G212600 Sobic007G212600 Sobic002G330000--Sobic007G212600 Sobic010G260100 Sobic010G260100 Sobic002G330000--Sobic010G260100 Sobic003G249800 Sobic003G249800 Sobic002G330000--Sobic003G249800 Sobic005G019700 Sobic005G019700 Sobic002G330000--Sobic005G019700 Sobic001G091801 Sobic001G091801 Sobic002G330000--Sobic001G091801 Sobic010G230700 Sobic010G230700 Sobic002G330000--Sobic010G230700 Sobic001G390300 Sobic001G390300 Sobic002G330000--Sobic001G390300
Octagon: transcription factors


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