Gene annotation
Transcriptome id Sobic.008G135600.1
Synonym Sb08g018720
Functional annotation osmotin, putative, expressed
UniProt C5YPY7
Pfam PF00314
Panther DB PTHR31048 PTHR31048:SF24
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G28790 : Pathogenesis-related thaumatin superfamily protein
RAP-DB (Rice) LOC_Os12g38150.1 : osmotin, putative, expressed
MaizeGDB (Corn) Zm00025a029100 , Zm00025a025407 , Zm00025a006871 , Zm00025a006880
Brachypodium -
Barley HORVU4Hr1G028150.1 , HORVU5Hr1G021390.1
Wheat -
Populus -


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cDNA sequences
Sobic.008G135600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G279700 expressed protein -
2 Sobic.009G110200 RING-H2 finger protein, putative, expressed -
3 Sobic.003G400200 plant-specific domain TIGR01615 family protein, expressed -
4 Sobic.006G241400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -
5 Sobic.003G331600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@OsFBX168 - F-box domain containing protein, expressed -
6 Sobic.004G293100 phosphatase, putative, expressed -
7 Sobic.006G206000 WRKY68, expressed -
8 Sobic.010G179800 OsFBK16 - F-box domain and kelch repeat containing protein, expressed -
9 Sobic.006G269250 - -
10 Sobic.001G403350 - -
11 Sobic.001G032000 peptide transporter PTR2, putative, expressed -
12 Sobic.006G241350 - -
13 Sobic.001G225300 - -
14 Sobic.002G367700 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
15 Sobic.002G421600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@thioredoxin, putative, expressed -
16 Sobic.005G086300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ANTH domain containing protein, expressed -
17 Sobic.002G269300 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@Not investigated(PubMedID : 23766026)@highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@dehydration-responsive element-binding protein, putative, expressed -
18 Sobic.003G290300 expressed protein -
19 Sobic.004G309000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@alpha-amylase precursor, putative, expressed K01176: AMY, amyA, alpha-amylase
20 Sobic.003G321200 pectinesterase, putative, expressed K01051: pectinesterase


Gene co-expression network
sample Sobic008G135600 Sobic008G135600 Sobic004G279700 Sobic004G279700 Sobic008G135600--Sobic004G279700 Sobic009G110200 Sobic009G110200 Sobic008G135600--Sobic009G110200 Sobic003G400200 Sobic003G400200 Sobic008G135600--Sobic003G400200 Sobic006G241400 Sobic006G241400 Sobic008G135600--Sobic006G241400 Sobic003G331600 Sobic003G331600 Sobic008G135600--Sobic003G331600 Sobic004G293100 Sobic004G293100 Sobic008G135600--Sobic004G293100 Sobic006G206000 Sobic006G206000 Sobic008G135600--Sobic006G206000 Sobic010G179800 Sobic010G179800 Sobic008G135600--Sobic010G179800 Sobic006G269250 Sobic006G269250 Sobic008G135600--Sobic006G269250 Sobic004G279700--Sobic003G400200 Sobic004G279700--Sobic006G241400 Sobic002G254200 Sobic002G254200 Sobic004G279700--Sobic002G254200 Sobic006G241350 Sobic006G241350 Sobic004G279700--Sobic006G241350 Sobic003G290300 Sobic003G290300 Sobic004G279700--Sobic003G290300 Sobic002G421600 Sobic002G421600 Sobic004G279700--Sobic002G421600 Sobic001G225200 Sobic001G225200 Sobic004G279700--Sobic001G225200 Sobic001G225300 Sobic001G225300 Sobic004G279700--Sobic001G225300 Sobic006G191600 Sobic006G191600 Sobic004G279700--Sobic006G191600 Sobic005G086300 Sobic005G086300 Sobic009G110200--Sobic005G086300 Sobic009G110200--Sobic008G135600 Sobic001G160700 Sobic001G160700 Sobic009G110200--Sobic001G160700 Sobic003G400200--Sobic004G279700 Sobic003G400200--Sobic006G269250 Sobic003G400200--Sobic006G241400 Sobic003G400200--Sobic001G225200 Sobic003G400200--Sobic002G421600 Sobic001G225600 Sobic001G225600 Sobic003G400200--Sobic001G225600 Sobic003G400200--Sobic001G225300 Sobic003G400200--Sobic002G254200 Sobic008G036900 Sobic008G036900 Sobic003G400200--Sobic008G036900 Sobic006G241400--Sobic004G279700 Sobic006G241400--Sobic006G241350 Sobic006G241400--Sobic003G400200 Sobic006G241600 Sobic006G241600 Sobic006G241400--Sobic006G241600 Sobic006G241400--Sobic002G421600 Sobic007G126100 Sobic007G126100 Sobic006G241400--Sobic007G126100 Sobic006G241400--Sobic008G036900 Sobic003G395400 Sobic003G395400 Sobic006G241400--Sobic003G395400 Sobic006G241400--Sobic002G254200 Sobic003G331600--Sobic003G290300 Sobic010G135000 Sobic010G135000 Sobic003G331600--Sobic010G135000 Sobic002G405600 Sobic002G405600 Sobic003G331600--Sobic002G405600 Sobic003G271201 Sobic003G271201 Sobic003G331600--Sobic003G271201 Sobic001G037000 Sobic001G037000 Sobic003G331600--Sobic001G037000 Sobic009G023200 Sobic009G023200 Sobic003G331600--Sobic009G023200 Sobic003G181500 Sobic003G181500 Sobic003G331600--Sobic003G181500 Sobic003G162700 Sobic003G162700 Sobic003G331600--Sobic003G162700 Sobic002G245800 Sobic002G245800 Sobic003G331600--Sobic002G245800 Sobic003G015400 Sobic003G015400 Sobic004G293100--Sobic003G015400 Sobic002G263100 Sobic002G263100 Sobic004G293100--Sobic002G263100 Sobic009G024500 Sobic009G024500 Sobic004G293100--Sobic009G024500 Sobic004G151400 Sobic004G151400 Sobic004G293100--Sobic004G151400 Sobic003G305100 Sobic003G305100 Sobic004G293100--Sobic003G305100 Sobic008G021100 Sobic008G021100 Sobic004G293100--Sobic008G021100 Sobic007G177200 Sobic007G177200 Sobic004G293100--Sobic007G177200 Sobic007G134900 Sobic007G134900 Sobic004G293100--Sobic007G134900 Sobic008G127500 Sobic008G127500 Sobic004G293100--Sobic008G127500 Sobic002G302500 Sobic002G302500 Sobic006G206000--Sobic002G302500 Sobic001G234800 Sobic001G234800 Sobic006G206000--Sobic001G234800 Sobic009G074100 Sobic009G074100 Sobic006G206000--Sobic009G074100 Sobic006G158266 Sobic006G158266 Sobic006G206000--Sobic006G158266 Sobic002G326100 Sobic002G326100 Sobic006G206000--Sobic002G326100 Sobic001G367600 Sobic001G367600 Sobic006G206000--Sobic001G367600 Sobic006G157500 Sobic006G157500 Sobic006G206000--Sobic006G157500 Sobic009G230100 Sobic009G230100 Sobic006G206000--Sobic009G230100 Sobic002G327300 Sobic002G327300 Sobic006G206000--Sobic002G327300 Sobic002G376000 Sobic002G376000 Sobic010G179800--Sobic002G376000 Sobic002G269400 Sobic002G269400 Sobic010G179800--Sobic002G269400 Sobic001G024500 Sobic001G024500 Sobic010G179800--Sobic001G024500 Sobic008G002700 Sobic008G002700 Sobic010G179800--Sobic008G002700 Sobic007G220700 Sobic007G220700 Sobic010G179800--Sobic007G220700 Sobic004G083900 Sobic004G083900 Sobic010G179800--Sobic004G083900 Sobic003G331500 Sobic003G331500 Sobic010G179800--Sobic003G331500 Sobic001G435500 Sobic001G435500 Sobic010G179800--Sobic001G435500 Sobic010G179800--Sobic009G110200 Sobic006G269250--Sobic003G400200 Sobic006G269250--Sobic001G225200 Sobic006G101300 Sobic006G101300 Sobic006G269250--Sobic006G101300 Sobic003G418500 Sobic003G418500 Sobic006G269250--Sobic003G418500 Sobic006G234900 Sobic006G234900 Sobic006G269250--Sobic006G234900 Sobic008G066200 Sobic008G066200 Sobic006G269250--Sobic008G066200 Sobic004G109900 Sobic004G109900 Sobic006G269250--Sobic004G109900 Sobic010G166500 Sobic010G166500 Sobic006G269250--Sobic010G166500 Sobic008G022000 Sobic008G022000 Sobic006G269250--Sobic008G022000
Octagon: transcription factors


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