Gene annotation
Transcriptome id Sobic.002G066400.1
Synonym Sb02g005570
Functional annotation OsFBDUF18 - F-box and DUF domain containing protein, expressed
UniProt C5XBZ4
Pfam PF12734
Panther DB PTHR31568 PTHR31568:SF15
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU5Hr1G107340.6 , HORVU5Hr1G107340.7 , HORVU5Hr1G107340.4 , HORVU5Hr1G107340.5 , HORVU5Hr1G107340.3 , HORVU5Hr1G107340.1 , HORVU5Hr1G107340.8 , HORVU5Hr1G107340.9
Wheat TraesCS5B02G456700 , TraesCS5A02G449200 , TraesCS5D02G455700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G330000 core histone H2A/H2B/H3/H4, putative, expressed K11251: histone H2A
2 Sobic.003G181500 ZOS1-09 - C2H2 zinc finger protein, expressed -
3 Sobic.009G230100 expressed protein -
4 Sobic.009G023200 glycine-rich protein A3, putative, expressed -
5 Sobic.003G321700 KH domain containing protein, putative, expressed K11884: PNO1, RNA-binding protein PNO1
6 Sobic.004G308400 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
7 Sobic.010G003700 scarecrow, putative, expressed -
8 Sobic.003G350300 ubiquitin-conjugating enzyme, putative, expressed K10575: UBE2G1, ubiquitin-conjugating enzyme E2 G1
9 Sobic.010G237000 coiled-coil domain-containing protein 72, putative, expressed -
10 Sobic.001G071100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@heat shock protein DnaJ, putative, expressed K09539: DnaJ homolog subfamily C member 19
11 Sobic.004G066600 two-component response regulator, putative, expressed K14491: two-component response regulator ARR-B family
12 Sobic.004G187900 riboflavin biosynthesis protein ribAB, chloroplast precursor, putative, expressed K14652: 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II
13 Sobic.002G326100 aspartic proteinase nepenthesin-1 precursor, putative, expressed -
14 Sobic.010G135000 thioredoxin reductase 2, putative, expressed K00384: trxB, thioredoxin reductase (NADPH)
15 Sobic.009G077800 expressed protein -
16 Sobic.010G259900 ribosomal protein L7Ae, putative, expressed K02908: RP-L30e, large subunit ribosomal protein L30e
17 Sobic.010G260100 ribosomal protein L7Ae, putative, expressed K02908: RP-L30e, large subunit ribosomal protein L30e
18 Sobic.002G345300 ZOS7-05 - C2H2 zinc finger protein, expressed -
19 Sobic.003G249800 60S ribosomal protein L18a-1, putative, expressed -
20 Sobic.003G360000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@transferase family protein, putative, expressed -


Gene co-expression network
sample Sobic002G066400 Sobic002G066400 Sobic002G330000 Sobic002G330000 Sobic002G066400--Sobic002G330000 Sobic003G181500 Sobic003G181500 Sobic002G066400--Sobic003G181500 Sobic009G230100 Sobic009G230100 Sobic002G066400--Sobic009G230100 Sobic009G023200 Sobic009G023200 Sobic002G066400--Sobic009G023200 Sobic003G321700 Sobic003G321700 Sobic002G066400--Sobic003G321700 Sobic004G308400 Sobic004G308400 Sobic002G066400--Sobic004G308400 Sobic010G003700 Sobic010G003700 Sobic002G066400--Sobic010G003700 Sobic003G350300 Sobic003G350300 Sobic002G066400--Sobic003G350300 Sobic010G237000 Sobic010G237000 Sobic002G066400--Sobic010G237000 Sobic004G145801 Sobic004G145801 Sobic002G330000--Sobic004G145801 Sobic002G330000--Sobic003G321700 Sobic007G212600 Sobic007G212600 Sobic002G330000--Sobic007G212600 Sobic010G260100 Sobic010G260100 Sobic002G330000--Sobic010G260100 Sobic003G249800 Sobic003G249800 Sobic002G330000--Sobic003G249800 Sobic005G019700 Sobic005G019700 Sobic002G330000--Sobic005G019700 Sobic001G091801 Sobic001G091801 Sobic002G330000--Sobic001G091801 Sobic010G230700 Sobic010G230700 Sobic002G330000--Sobic010G230700 Sobic001G390300 Sobic001G390300 Sobic002G330000--Sobic001G390300 Sobic004G187900 Sobic004G187900 Sobic003G181500--Sobic004G187900 Sobic003G181500--Sobic003G350300 Sobic010G149300 Sobic010G149300 Sobic003G181500--Sobic010G149300 Sobic003G181500--Sobic003G249800 Sobic001G288800 Sobic001G288800 Sobic003G181500--Sobic001G288800 Sobic001G281400 Sobic001G281400 Sobic003G181500--Sobic001G281400 Sobic003G181500--Sobic009G023200 Sobic002G211900 Sobic002G211900 Sobic003G181500--Sobic002G211900 Sobic002G046100 Sobic002G046100 Sobic003G181500--Sobic002G046100 Sobic004G144500 Sobic004G144500 Sobic009G230100--Sobic004G144500 Sobic009G077800 Sobic009G077800 Sobic009G230100--Sobic009G077800 Sobic007G087200 Sobic007G087200 Sobic009G230100--Sobic007G087200 Sobic004G166700 Sobic004G166700 Sobic009G230100--Sobic004G166700 Sobic003G393700 Sobic003G393700 Sobic009G230100--Sobic003G393700 Sobic002G345300 Sobic002G345300 Sobic009G230100--Sobic002G345300 Sobic010G268400 Sobic010G268400 Sobic009G230100--Sobic010G268400 Sobic004G101300 Sobic004G101300 Sobic009G230100--Sobic004G101300 Sobic003G417350 Sobic003G417350 Sobic009G230100--Sobic003G417350 Sobic009G023200--Sobic004G187900 Sobic010G204600 Sobic010G204600 Sobic009G023200--Sobic010G204600 Sobic003G063200 Sobic003G063200 Sobic009G023200--Sobic003G063200 Sobic001G067601 Sobic001G067601 Sobic009G023200--Sobic001G067601 Sobic009G023200--Sobic002G046100 Sobic002G245800 Sobic002G245800 Sobic009G023200--Sobic002G245800 Sobic009G023200--Sobic003G181500 Sobic003G202200 Sobic003G202200 Sobic009G023200--Sobic003G202200 Sobic005G196800 Sobic005G196800 Sobic009G023200--Sobic005G196800 Sobic003G321700--Sobic007G212600 Sobic003G321700--Sobic010G260100 Sobic003G321700--Sobic001G091801 Sobic007G190800 Sobic007G190800 Sobic003G321700--Sobic007G190800 Sobic003G322400 Sobic003G322400 Sobic003G321700--Sobic003G322400 Sobic010G259900 Sobic010G259900 Sobic003G321700--Sobic010G259900 Sobic003G321700--Sobic004G145801 Sobic006G147000 Sobic006G147000 Sobic003G321700--Sobic006G147000 Sobic004G104100 Sobic004G104100 Sobic003G321700--Sobic004G104100 Sobic004G308400--Sobic010G268400 Sobic006G182100 Sobic006G182100 Sobic004G308400--Sobic006G182100 Sobic010G041600 Sobic010G041600 Sobic004G308400--Sobic010G041600 Sobic004G066600 Sobic004G066600 Sobic004G308400--Sobic004G066600 Sobic004G308400--Sobic002G345300 Sobic001G353600 Sobic001G353600 Sobic004G308400--Sobic001G353600 Sobic001G536500 Sobic001G536500 Sobic004G308400--Sobic001G536500 Sobic005G228000 Sobic005G228000 Sobic004G308400--Sobic005G228000 Sobic001G034700 Sobic001G034700 Sobic004G308400--Sobic001G034700 Sobic008G036900 Sobic008G036900 Sobic010G003700--Sobic008G036900 Sobic003G305700 Sobic003G305700 Sobic010G003700--Sobic003G305700 Sobic005G078800 Sobic005G078800 Sobic010G003700--Sobic005G078800 Sobic003G211200 Sobic003G211200 Sobic010G003700--Sobic003G211200 Sobic001G328800 Sobic001G328800 Sobic010G003700--Sobic001G328800 Sobic010G003700--Sobic002G066400 Sobic004G262200 Sobic004G262200 Sobic010G003700--Sobic004G262200 Sobic003G344600 Sobic003G344600 Sobic010G003700--Sobic003G344600 Sobic002G278300 Sobic002G278300 Sobic010G003700--Sobic002G278300 Sobic003G350300--Sobic004G187900 Sobic003G350300--Sobic002G345300 Sobic003G350300--Sobic002G046100 Sobic003G285800 Sobic003G285800 Sobic003G350300--Sobic003G285800 Sobic003G350300--Sobic001G281400 Sobic004G321300 Sobic004G321300 Sobic003G350300--Sobic004G321300 Sobic010G274900 Sobic010G274900 Sobic003G350300--Sobic010G274900 Sobic010G086200 Sobic010G086200 Sobic003G350300--Sobic010G086200 Sobic003G350300--Sobic003G181500 Sobic009G016201 Sobic009G016201 Sobic010G237000--Sobic009G016201 Sobic010G237000--Sobic003G344600 Sobic001G037000 Sobic001G037000 Sobic010G237000--Sobic001G037000 Sobic010G237000--Sobic002G330000 Sobic001G128400 Sobic001G128400 Sobic010G237000--Sobic001G128400 Sobic010G237000--Sobic003G249800 Sobic002G282400 Sobic002G282400 Sobic010G237000--Sobic002G282400 Sobic003G254800 Sobic003G254800 Sobic010G237000--Sobic003G254800 Sobic010G237000--Sobic003G350300
Octagon: transcription factors


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