Gene annotation
Transcriptome id Sobic.008G134300.1,Sobic.008G134300.2
Synonym
Functional annotation protein kinase domain containing protein, expressed
UniProt C5YPX1 , A0A1Z5R7E0
Pfam PF13855 PF07714 PF12819 PF07714 PF12819
Panther DB PTHR27003 PTHR27003:SF75
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity GO:0005515protein binding GO:0006468protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT4G29990 : Leucine-rich repeat transmembrane protein kinase protein
RAP-DB (Rice) LOC_Os12g37980.1 : protein kinase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a025429 , Zm00025a025430
Brachypodium KQJ86233 , KQJ86234 , PNT62478
Barley HORVU3Hr1G068540.2 , HORVU3Hr1G068540.3 , HORVU3Hr1G068540.4 , HORVU5Hr1G021690.2 , HORVU5Hr1G021690.4 , HORVU5Hr1G021690.9 , HORVU5Hr1G021690.13 , HORVU5Hr1G021690.12 , HORVU5Hr1G021690.11 , HORVU5Hr1G021690.10 , HORVU5Hr1G021690.17 , HORVU5Hr1G021690.16 , HORVU5Hr1G021690.15 , HORVU5Hr1G021690.14 , HORVU5Hr1G021690.18 , HORVU5Hr1G021690.3 , HORVU5Hr1G021690.7 , HORVU5Hr1G021690.6 , HORVU5Hr1G021690.5 , HORVU5Hr1G021690.8 , HORVU5Hr1G021690.22 , HORVU5Hr1G021690.23 , HORVU5Hr1G021690.20 , HORVU5Hr1G021690.21
Wheat TraesCS3A02G286500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G371750 - -
2 Sobic.001G127300 - -
3 Sobic.010G045400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@AMP-binding enzyme, putative, expressed K01897: ACSL, long-chain acyl-CoA synthetase
4 Sobic.003G215200 expressed protein -
5 Sobic.001G258600 GDSL-like lipase/acylhydrolase, putative, expressed -
6 Sobic.004G262200 DNA binding protein, putative, expressed -
7 Sobic.006G273300 "cell wall modification, deposition of casparian strips, endodermis, transmembrane"(PubMedID : 24920445)@membrane associated DUF588 domain containing protein, putative, expressed -
8 Sobic.009G102300 hydrolase, acting on glycosyl bonds, putative, expressed K01227: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
9 Sobic.003G064800 dirigent, putative, expressed -
10 Sobic.007G008600 GLTP domain containing protein, putative, expressed -
11 Sobic.005G127400 expressed protein -
12 Sobic.002G255000 AIR12, putative, expressed -
13 Sobic.003G182200 1-aminocyclopropane-1-carboxylate oxidase homolog 1, putative, expressed -
14 Sobic.010G241800 - -
15 Sobic.007G090460 - K08235: xyloglucan:xyloglucosyl transferase
16 Sobic.001G438200 expressed protein -
17 Sobic.003G368000 OsFBT3 - F-box and tubby domain containing protein, expressed -
18 Sobic.003G349400 expressed protein -
19 Sobic.005G078800 expressed protein -
20 Sobic.008G037900 transcription factor, putative, expressed K14431: transcription factor TGA


Gene co-expression network
sample Sobic008G134300 Sobic008G134300 Sobic003G371750 Sobic003G371750 Sobic008G134300--Sobic003G371750 Sobic001G127300 Sobic001G127300 Sobic008G134300--Sobic001G127300 Sobic010G045400 Sobic010G045400 Sobic008G134300--Sobic010G045400 Sobic003G215200 Sobic003G215200 Sobic008G134300--Sobic003G215200 Sobic001G258600 Sobic001G258600 Sobic008G134300--Sobic001G258600 Sobic004G262200 Sobic004G262200 Sobic008G134300--Sobic004G262200 Sobic006G273300 Sobic006G273300 Sobic008G134300--Sobic006G273300 Sobic009G102300 Sobic009G102300 Sobic008G134300--Sobic009G102300 Sobic003G064800 Sobic003G064800 Sobic008G134300--Sobic003G064800 Sobic003G371750--Sobic004G262200 Sobic002G326500 Sobic002G326500 Sobic003G371750--Sobic002G326500 Sobic002G003800 Sobic002G003800 Sobic003G371750--Sobic002G003800 Sobic010G062100 Sobic010G062100 Sobic003G371750--Sobic010G062100 Sobic001G304201 Sobic001G304201 Sobic003G371750--Sobic001G304201 Sobic009G221500 Sobic009G221500 Sobic003G371750--Sobic009G221500 Sobic004G042000 Sobic004G042000 Sobic003G371750--Sobic004G042000 Sobic003G305700 Sobic003G305700 Sobic003G371750--Sobic003G305700 Sobic006G197100 Sobic006G197100 Sobic003G371750--Sobic006G197100 Sobic001G127300--Sobic008G134300 Sobic009G157900 Sobic009G157900 Sobic001G127300--Sobic009G157900 Sobic007G098400 Sobic007G098400 Sobic001G127300--Sobic007G098400 Sobic006G076201 Sobic006G076201 Sobic001G127300--Sobic006G076201 Sobic009G177400 Sobic009G177400 Sobic001G127300--Sobic009G177400 Sobic010G192432 Sobic010G192432 Sobic001G127300--Sobic010G192432 Sobic005G211400 Sobic005G211400 Sobic001G127300--Sobic005G211400 Sobic010G161450 Sobic010G161450 Sobic001G127300--Sobic010G161450 Sobic002G114800 Sobic002G114800 Sobic001G127300--Sobic002G114800 Sobic008G037900 Sobic008G037900 Sobic010G045400--Sobic008G037900 Sobic003G017601 Sobic003G017601 Sobic010G045400--Sobic003G017601 Sobic003G368000 Sobic003G368000 Sobic010G045400--Sobic003G368000 Sobic004G161900 Sobic004G161900 Sobic010G045400--Sobic004G161900 Sobic006G230300 Sobic006G230300 Sobic010G045400--Sobic006G230300 Sobic001G299100 Sobic001G299100 Sobic010G045400--Sobic001G299100 Sobic008G191400 Sobic008G191400 Sobic010G045400--Sobic008G191400 Sobic001G218500 Sobic001G218500 Sobic010G045400--Sobic001G218500 Sobic010G213600 Sobic010G213600 Sobic010G045400--Sobic010G213600 Sobic003G417100 Sobic003G417100 Sobic003G215200--Sobic003G417100 Sobic003G215200--Sobic006G230300 Sobic003G215200--Sobic004G262200 Sobic003G157600 Sobic003G157600 Sobic003G215200--Sobic003G157600 Sobic010G194100 Sobic010G194100 Sobic003G215200--Sobic010G194100 Sobic006G157900 Sobic006G157900 Sobic003G215200--Sobic006G157900 Sobic002G183700 Sobic002G183700 Sobic003G215200--Sobic002G183700 Sobic002G042200 Sobic002G042200 Sobic003G215200--Sobic002G042200 Sobic003G228600 Sobic003G228600 Sobic003G215200--Sobic003G228600 Sobic001G258600--Sobic003G368000 Sobic003G099000 Sobic003G099000 Sobic001G258600--Sobic003G099000 Sobic001G258600--Sobic010G045400 Sobic001G258600--Sobic008G037900 Sobic007G090460 Sobic007G090460 Sobic001G258600--Sobic007G090460 Sobic001G250100 Sobic001G250100 Sobic001G258600--Sobic001G250100 Sobic003G183300 Sobic003G183300 Sobic001G258600--Sobic003G183300 Sobic006G201000 Sobic006G201000 Sobic001G258600--Sobic006G201000 Sobic001G258600--Sobic003G017601 Sobic004G262200--Sobic003G371750 Sobic006G059700 Sobic006G059700 Sobic004G262200--Sobic006G059700 Sobic001G328800 Sobic001G328800 Sobic004G262200--Sobic001G328800 Sobic003G280400 Sobic003G280400 Sobic004G262200--Sobic003G280400 Sobic004G262200--Sobic006G197100 Sobic004G262200--Sobic004G042000 Sobic006G260200 Sobic006G260200 Sobic004G262200--Sobic006G260200 Sobic004G262200--Sobic009G221500 Sobic003G404600 Sobic003G404600 Sobic004G262200--Sobic003G404600 Sobic002G255000 Sobic002G255000 Sobic006G273300--Sobic002G255000 Sobic001G438200 Sobic001G438200 Sobic006G273300--Sobic001G438200 Sobic007G008600 Sobic007G008600 Sobic006G273300--Sobic007G008600 Sobic003G140700 Sobic003G140700 Sobic006G273300--Sobic003G140700 Sobic006G273300--Sobic003G064800 Sobic006G225500 Sobic006G225500 Sobic006G273300--Sobic006G225500 Sobic005G127400 Sobic005G127400 Sobic006G273300--Sobic005G127400 Sobic004G029100 Sobic004G029100 Sobic006G273300--Sobic004G029100 Sobic006G273300--Sobic002G183700 Sobic009G102300--Sobic010G045400 Sobic009G102300--Sobic006G230300 Sobic009G102300--Sobic002G114800 Sobic008G004100 Sobic008G004100 Sobic009G102300--Sobic008G004100 Sobic009G246100 Sobic009G246100 Sobic009G102300--Sobic009G246100 Sobic009G102300--Sobic003G215200 Sobic006G130501 Sobic006G130501 Sobic009G102300--Sobic006G130501 Sobic009G102300--Sobic004G161900 Sobic010G218300 Sobic010G218300 Sobic009G102300--Sobic010G218300 Sobic003G064800--Sobic005G127400 Sobic003G064800--Sobic002G255000 Sobic004G306900 Sobic004G306900 Sobic003G064800--Sobic004G306900 Sobic003G064800--Sobic001G438200 Sobic006G106900 Sobic006G106900 Sobic003G064800--Sobic006G106900 Sobic001G238200 Sobic001G238200 Sobic003G064800--Sobic001G238200 Sobic003G064800--Sobic003G140700 Sobic007G086300 Sobic007G086300 Sobic003G064800--Sobic007G086300 Sobic010G234500 Sobic010G234500 Sobic003G064800--Sobic010G234500
Octagon: transcription factors


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