Gene annotation
Transcriptome id Sobic.006G250900.3
Synonym Sb06g031590
Functional annotation alpha-1,4-glucan-protein synthase, putative, expressed
UniProt C5Y9L6
Pfam PF03214
Panther DB PTHR31682 PTHR31682:SF4
NCBI CDD -
KEGG Orthology K13379; RGP, reversibly glycosylated polypeptide / UDP-arabinopyranose mutase
Gene Ontology GO:0016866; intramolecular transferase activity


Orthologs (automatic annotation)
TAIR AT5G16510 : Alpha-1,4-glucan-protein synthase family protein
RAP-DB (Rice) LOC_Os04g56520.2 : alpha-1,4-glucan-protein synthase, putative, expressed
MaizeGDB (Corn) Zm00025a009446
Brachypodium KQJ85095
Barley HORVU2Hr1G111070.2 , HORVU2Hr1G111070.3
Wheat TraesCS2B02G526700 , TraesCS2D02G498900 , TraesCS2A02G498600
Populus -


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cDNA sequences
Sobic.006G250900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G281300 trafficking protein particle complex subunit, putative, expressed -
2 Sobic.001G067900 clathrin adaptor complex small chain domain containing protein, expressed K12394: AP-1 complex subunit sigma 1/2
3 Sobic.003G261400 DUF292 domain containing protein, expressed -
4 Sobic.002G378200 adaptor complexes medium subunit family domain containing protein, expressed K12402: AP-4 complex subunit mu-1
5 Sobic.003G314100 AGAP000951-PA, putative, expressed -
6 Sobic.003G007500 CK1_CaseinKinase_1.1 - CK1 includes the casein kinase 1 kinases, expressed -
7 Sobic.001G054200 green ripe-like, putative, expressed -
8 Sobic.003G226500 suppressor of G2 allele of SKP1, putative, expressed K12795: SUGT1, suppressor of G2 allele of SKP1
9 Sobic.010G057900 26S protease regulatory subunit 6A, putative, expressed K03065: PSMC3, 26S proteasome regulatory subunit T5
10 Sobic.001G522900 expressed protein -
11 Sobic.010G205300 secreted salivary protein, putative, expressed -
12 Sobic.001G489700 prenyltransferase, putative, expressed K02257: COX10, ctaB, heme o synthase
13 Sobic.007G186300 ankyrin repeat domain containing protein, putative, expressed -
14 Sobic.004G185600 expressed protein -
15 Sobic.006G254700 PHF5-like protein domain containing protein, expressed K12834: PHD finger-like domain-containing protein 5A
16 Sobic.001G307900 LYR motif containing protein, putative, expressed K18167: succinate dehydrogenase assembly factor 1
17 Sobic.001G078800 similar to Serine/threonine-protein kinase SAPK8(PubMedID : 29862293)@CAMK_CAMK_like.22 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K14498: serine/threonine-protein kinase SRK2
18 Sobic.001G051200 vesicle-associated membrane protein, putative, expressed K08511: vesicle-associated membrane protein 72
K08515: vesicle-associated membrane protein 7
19 Sobic.001G105100 neighbor of COX4, putative, expressed -
20 Sobic.010G251100 - K03257: translation initiation factor 4A


Gene co-expression network
sample Sobic006G250900 Sobic006G250900 Sobic002G281300 Sobic002G281300 Sobic006G250900--Sobic002G281300 Sobic001G067900 Sobic001G067900 Sobic006G250900--Sobic001G067900 Sobic003G261400 Sobic003G261400 Sobic006G250900--Sobic003G261400 Sobic002G378200 Sobic002G378200 Sobic006G250900--Sobic002G378200 Sobic003G314100 Sobic003G314100 Sobic006G250900--Sobic003G314100 Sobic003G007500 Sobic003G007500 Sobic006G250900--Sobic003G007500 Sobic001G054200 Sobic001G054200 Sobic006G250900--Sobic001G054200 Sobic003G226500 Sobic003G226500 Sobic006G250900--Sobic003G226500 Sobic010G057900 Sobic010G057900 Sobic006G250900--Sobic010G057900 Sobic002G281300--Sobic003G261400 Sobic002G281300--Sobic006G250900 Sobic002G281300--Sobic003G007500 Sobic002G281300--Sobic001G067900 Sobic010G205300 Sobic010G205300 Sobic002G281300--Sobic010G205300 Sobic001G388200 Sobic001G388200 Sobic002G281300--Sobic001G388200 Sobic004G194900 Sobic004G194900 Sobic002G281300--Sobic004G194900 Sobic002G281300--Sobic001G054200 Sobic003G349300 Sobic003G349300 Sobic002G281300--Sobic003G349300 Sobic001G105100 Sobic001G105100 Sobic001G067900--Sobic001G105100 Sobic004G072800 Sobic004G072800 Sobic001G067900--Sobic004G072800 Sobic006G257001 Sobic006G257001 Sobic001G067900--Sobic006G257001 Sobic001G067900--Sobic002G281300 Sobic003G217100 Sobic003G217100 Sobic001G067900--Sobic003G217100 Sobic006G034800 Sobic006G034800 Sobic001G067900--Sobic006G034800 Sobic001G067900--Sobic006G250900 Sobic001G067900--Sobic010G205300 Sobic001G237500 Sobic001G237500 Sobic001G067900--Sobic001G237500 Sobic001G283200 Sobic001G283200 Sobic003G261400--Sobic001G283200 Sobic003G261400--Sobic002G281300 Sobic003G261500 Sobic003G261500 Sobic003G261400--Sobic003G261500 Sobic007G045600 Sobic007G045600 Sobic003G261400--Sobic007G045600 Sobic001G458700 Sobic001G458700 Sobic003G261400--Sobic001G458700 Sobic004G130900 Sobic004G130900 Sobic003G261400--Sobic004G130900 Sobic003G124800 Sobic003G124800 Sobic003G261400--Sobic003G124800 Sobic001G051200 Sobic001G051200 Sobic003G261400--Sobic001G051200 Sobic010G000900 Sobic010G000900 Sobic003G261400--Sobic010G000900 Sobic006G278700 Sobic006G278700 Sobic002G378200--Sobic006G278700 Sobic004G345700 Sobic004G345700 Sobic002G378200--Sobic004G345700 Sobic002G084300 Sobic002G084300 Sobic002G378200--Sobic002G084300 Sobic004G007300 Sobic004G007300 Sobic002G378200--Sobic004G007300 Sobic004G283000 Sobic004G283000 Sobic002G378200--Sobic004G283000 Sobic001G056200 Sobic001G056200 Sobic002G378200--Sobic001G056200 Sobic002G132300 Sobic002G132300 Sobic002G378200--Sobic002G132300 Sobic001G028400 Sobic001G028400 Sobic002G378200--Sobic001G028400 Sobic003G187200 Sobic003G187200 Sobic002G378200--Sobic003G187200 Sobic003G314100--Sobic010G057900 Sobic002G268400 Sobic002G268400 Sobic003G314100--Sobic002G268400 Sobic003G314100--Sobic006G250900 Sobic006G101700 Sobic006G101700 Sobic003G314100--Sobic006G101700 Sobic004G356900 Sobic004G356900 Sobic003G314100--Sobic004G356900 Sobic001G263000 Sobic001G263000 Sobic003G314100--Sobic001G263000 Sobic009G165800 Sobic009G165800 Sobic003G314100--Sobic009G165800 Sobic003G314100--Sobic003G226500 Sobic001G281600 Sobic001G281600 Sobic003G314100--Sobic001G281600 Sobic007G186300 Sobic007G186300 Sobic003G007500--Sobic007G186300 Sobic010G083700 Sobic010G083700 Sobic003G007500--Sobic010G083700 Sobic010G168600 Sobic010G168600 Sobic003G007500--Sobic010G168600 Sobic001G078500 Sobic001G078500 Sobic003G007500--Sobic001G078500 Sobic003G295400 Sobic003G295400 Sobic003G007500--Sobic003G295400 Sobic003G007500--Sobic001G051200 Sobic003G007500--Sobic004G072800 Sobic004G104900 Sobic004G104900 Sobic003G007500--Sobic004G104900 Sobic003G007500--Sobic002G281300 Sobic001G054200--Sobic010G083700 Sobic006G263900 Sobic006G263900 Sobic001G054200--Sobic006G263900 Sobic006G212100 Sobic006G212100 Sobic001G054200--Sobic006G212100 Sobic001G054200--Sobic007G186300 Sobic004G293700 Sobic004G293700 Sobic001G054200--Sobic004G293700 Sobic009G246950 Sobic009G246950 Sobic001G054200--Sobic009G246950 Sobic004G079100 Sobic004G079100 Sobic001G054200--Sobic004G079100 Sobic006G232200 Sobic006G232200 Sobic001G054200--Sobic006G232200 Sobic003G115800 Sobic003G115800 Sobic001G054200--Sobic003G115800 Sobic003G250500 Sobic003G250500 Sobic003G226500--Sobic003G250500 Sobic003G226500--Sobic004G104900 Sobic003G226500--Sobic003G007500 Sobic003G350600 Sobic003G350600 Sobic003G226500--Sobic003G350600 Sobic001G136900 Sobic001G136900 Sobic003G226500--Sobic001G136900 Sobic003G226500--Sobic010G083700 Sobic004G226800 Sobic004G226800 Sobic003G226500--Sobic004G226800 Sobic001G512600 Sobic001G512600 Sobic003G226500--Sobic001G512600 Sobic003G226500--Sobic001G054200 Sobic010G057900--Sobic002G268400 Sobic010G057900--Sobic006G101700 Sobic002G143000 Sobic002G143000 Sobic010G057900--Sobic002G143000 Sobic001G078800 Sobic001G078800 Sobic010G057900--Sobic001G078800 Sobic010G057900--Sobic003G314100 Sobic009G192000 Sobic009G192000 Sobic010G057900--Sobic009G192000 Sobic010G057900--Sobic010G205300 Sobic010G057900--Sobic001G458700 Sobic010G057900--Sobic004G356900
Octagon: transcription factors


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