Gene annotation
Transcriptome id Sobic.001G154100.1
Synonym ATJ, ATJ3, Sb01g013390
Functional annotation chaperone protein dnaJ, putative, expressed
UniProt C5WR54
Pfam PF00684 PF00226 PF01556
Panther DB PTHR24078 PTHR24078:SF237
NCBI CDD KOG0712; Molecular chaperone (DnaJ superfamily)
KEGG Orthology K09503; DnaJ homolog subfamily A member 2
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G22060 : DNAJ homologue 2
RAP-DB (Rice) LOC_Os03g44620.2 : chaperone protein dnaJ, putative, expressed
MaizeGDB (Corn) Zm00025a016618 , Zm00025a017241 , Zm00025a008483 , Zm00025a007238
Brachypodium KQK13967 , KQK12842
Barley HORVU3Hr1G039880.11 , HORVU3Hr1G039880.10 , HORVU3Hr1G039880.13 , HORVU3Hr1G039880.12 , HORVU3Hr1G039880.14 , HORVU5Hr1G103680.4 , HORVU5Hr1G103680.3 , HORVU5Hr1G103680.2 , HORVU5Hr1G103680.1 , HORVU5Hr1G092610.5 , HORVU5Hr1G092610.4 , HORVU5Hr1G092610.7 , HORVU5Hr1G092610.6 , HORVU5Hr1G092610.1 , HORVU5Hr1G092610.3 , HORVU5Hr1G092610.2 , HORVU3Hr1G039880.9 , HORVU3Hr1G039880.8 , HORVU3Hr1G039880.5 , HORVU3Hr1G039880.4 , HORVU3Hr1G039880.7 , HORVU3Hr1G039880.6 , HORVU3Hr1G039880.1 , HORVU3Hr1G039880.3 , HORVU3Hr1G039880.2
Wheat TraesCS5A02G426100 , TraesCS5A02G372900 , TraesCS5B02G374900 , TraesCS5B02G428000 , TraesCS5D02G434100 , TraesCS5D02G382400
Populus PNT19030


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cDNA sequences
Sobic.001G154100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G026500 OsFBK21 - F-box domain and kelch repeat containing protein, expressed -
2 Sobic.009G135800 CUE domain containing protein, expressed -
3 Sobic.001G111500 far-red light perception and signal transduction(PubMedID : 14963106)@phytochrome A, putative, expressed K12120: phytochrome A
4 Sobic.001G111366 - -
5 Sobic.004G006300 translationally-controlled tumor protein, putative, expressed -
6 Sobic.002G340100 GTPase-activating protein, putative, expressed K12486: stromal membrane-associated protein
7 Sobic.003G145900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@acyltransferase, putative, expressed K13510: lysophosphatidylcholine acyltransferase / lyso-PAF acetyltransferase
8 Sobic.009G178600 ADP-ribosylation factor, putative, expressed K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other
9 Sobic.002G417800 alpha-galactosidase precursor, putative, expressed K07407: E3.2.1.22B, galA, alpha-galactosidase
10 Sobic.004G348300 Ser/Thr protein phosphatase family protein, putative, expressed K06269: serine/threonine-protein phosphatase PP1 catalytic subunit
11 Sobic.003G267800 ranBP1 domain containing protein, expressed K15304: Ran-binding protein 3
12 Sobic.006G048700 "fatty acid desaturase, up-regulated under severe drought stress"(PubMedID : 24655390)@Acyl-acyl-carrier-protein desaturase (Os)(PubMedID : 27208977)@acyl-desaturase, chloroplast precursor, putative, expressed K03921: FAB2, SSI2, acyl-[acyl-carrier-protein] desaturase
13 Sobic.003G093300 - -
14 Sobic.004G006200 ferrochelatase-2, chloroplast precursor, putative, expressed K01772: hemH, protoporphyrin/coproporphyrin ferrochelatase
15 Sobic.006G003400 expressed protein -
16 Sobic.001G028700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.001G498200 YT521-B-like family domain containing protein, expressed -
18 Sobic.003G426800 expressed protein -
19 Sobic.001G039700 transcription elongation factor protein, putative, expressed K03145: transcription elongation factor S-II
20 Sobic.006G173100 pre-mRNA-processing factor 31, putative, expressed K12844: U4/U6 small nuclear ribonucleoprotein PRP31


Gene co-expression network
sample Sobic001G154100 Sobic001G154100 Sobic007G026500 Sobic007G026500 Sobic001G154100--Sobic007G026500 Sobic009G135800 Sobic009G135800 Sobic001G154100--Sobic009G135800 Sobic001G111500 Sobic001G111500 Sobic001G154100--Sobic001G111500 Sobic001G111366 Sobic001G111366 Sobic001G154100--Sobic001G111366 Sobic004G006300 Sobic004G006300 Sobic001G154100--Sobic004G006300 Sobic002G340100 Sobic002G340100 Sobic001G154100--Sobic002G340100 Sobic003G145900 Sobic003G145900 Sobic001G154100--Sobic003G145900 Sobic009G178600 Sobic009G178600 Sobic001G154100--Sobic009G178600 Sobic002G417800 Sobic002G417800 Sobic001G154100--Sobic002G417800 Sobic003G093300 Sobic003G093300 Sobic007G026500--Sobic003G093300 Sobic004G295800 Sobic004G295800 Sobic007G026500--Sobic004G295800 Sobic009G121100 Sobic009G121100 Sobic007G026500--Sobic009G121100 Sobic004G021100 Sobic004G021100 Sobic007G026500--Sobic004G021100 Sobic003G407300 Sobic003G407300 Sobic007G026500--Sobic003G407300 Sobic004G052900 Sobic004G052900 Sobic007G026500--Sobic004G052900 Sobic007G026500--Sobic002G340100 Sobic007G026500--Sobic001G154100 Sobic001G253700 Sobic001G253700 Sobic007G026500--Sobic001G253700 Sobic004G031700 Sobic004G031700 Sobic009G135800--Sobic004G031700 Sobic009G135800--Sobic002G340100 Sobic008G024600 Sobic008G024600 Sobic009G135800--Sobic008G024600 Sobic006G128900 Sobic006G128900 Sobic009G135800--Sobic006G128900 Sobic002G053000 Sobic002G053000 Sobic009G135800--Sobic002G053000 Sobic003G445400 Sobic003G445400 Sobic009G135800--Sobic003G445400 Sobic002G158700 Sobic002G158700 Sobic009G135800--Sobic002G158700 Sobic006G173100 Sobic006G173100 Sobic009G135800--Sobic006G173100 Sobic009G000500 Sobic009G000500 Sobic009G135800--Sobic009G000500 Sobic001G111500--Sobic001G111366 Sobic001G028700 Sobic001G028700 Sobic001G111500--Sobic001G028700 Sobic001G111500--Sobic001G154100 Sobic004G153400 Sobic004G153400 Sobic001G111500--Sobic004G153400 Sobic001G111500--Sobic004G006300 Sobic001G111500--Sobic003G093300 Sobic010G042900 Sobic010G042900 Sobic001G111500--Sobic010G042900 Sobic004G297400 Sobic004G297400 Sobic001G111500--Sobic004G297400 Sobic009G235900 Sobic009G235900 Sobic001G111500--Sobic009G235900 Sobic001G111366--Sobic001G111500 Sobic001G111366--Sobic001G028700 Sobic001G111366--Sobic004G006300 Sobic001G111366--Sobic009G235900 Sobic001G111366--Sobic010G042900 Sobic001G111366--Sobic001G154100 Sobic004G256600 Sobic004G256600 Sobic001G111366--Sobic004G256600 Sobic001G111366--Sobic004G153400 Sobic010G001600 Sobic010G001600 Sobic001G111366--Sobic010G001600 Sobic004G006300--Sobic009G178600 Sobic009G117300 Sobic009G117300 Sobic004G006300--Sobic009G117300 Sobic006G254700 Sobic006G254700 Sobic004G006300--Sobic006G254700 Sobic006G209500 Sobic006G209500 Sobic004G006300--Sobic006G209500 Sobic004G348100 Sobic004G348100 Sobic004G006300--Sobic004G348100 Sobic001G428400 Sobic001G428400 Sobic004G006300--Sobic001G428400 Sobic009G117400 Sobic009G117400 Sobic004G006300--Sobic009G117400 Sobic004G006300--Sobic001G111366 Sobic004G006300--Sobic001G028700 Sobic001G292200 Sobic001G292200 Sobic002G340100--Sobic001G292200 Sobic001G071400 Sobic001G071400 Sobic002G340100--Sobic001G071400 Sobic006G245400 Sobic006G245400 Sobic002G340100--Sobic006G245400 Sobic002G315200 Sobic002G315200 Sobic002G340100--Sobic002G315200 Sobic002G340100--Sobic009G135800 Sobic001G114000 Sobic001G114000 Sobic002G340100--Sobic001G114000 Sobic007G217000 Sobic007G217000 Sobic002G340100--Sobic007G217000 Sobic002G340100--Sobic004G052900 Sobic001G474600 Sobic001G474600 Sobic002G340100--Sobic001G474600 Sobic003G145900--Sobic009G235900 Sobic008G160700 Sobic008G160700 Sobic003G145900--Sobic008G160700 Sobic005G007800 Sobic005G007800 Sobic003G145900--Sobic005G007800 Sobic004G330900 Sobic004G330900 Sobic003G145900--Sobic004G330900 Sobic001G221100 Sobic001G221100 Sobic003G145900--Sobic001G221100 Sobic003G145900--Sobic010G042900 Sobic002G303000 Sobic002G303000 Sobic003G145900--Sobic002G303000 Sobic006G114500 Sobic006G114500 Sobic003G145900--Sobic006G114500 Sobic004G037900 Sobic004G037900 Sobic003G145900--Sobic004G037900 Sobic009G178600--Sobic004G006300 Sobic001G083600 Sobic001G083600 Sobic009G178600--Sobic001G083600 Sobic008G128600 Sobic008G128600 Sobic009G178600--Sobic008G128600 Sobic003G202800 Sobic003G202800 Sobic009G178600--Sobic003G202800 Sobic010G190600 Sobic010G190600 Sobic009G178600--Sobic010G190600 Sobic002G010300 Sobic002G010300 Sobic009G178600--Sobic002G010300 Sobic004G283000 Sobic004G283000 Sobic009G178600--Sobic004G283000 Sobic004G034400 Sobic004G034400 Sobic009G178600--Sobic004G034400 Sobic009G178600--Sobic006G209500 Sobic002G417800--Sobic009G135800 Sobic008G078300 Sobic008G078300 Sobic002G417800--Sobic008G078300 Sobic002G396000 Sobic002G396000 Sobic002G417800--Sobic002G396000 Sobic002G417800--Sobic002G053000 Sobic002G417800--Sobic006G128900 Sobic004G018300 Sobic004G018300 Sobic002G417800--Sobic004G018300 Sobic003G267800 Sobic003G267800 Sobic002G417800--Sobic003G267800 Sobic002G417800--Sobic001G292200 Sobic001G081000 Sobic001G081000 Sobic002G417800--Sobic001G081000
Octagon: transcription factors


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