Gene annotation
Transcriptome id Sobic.002G417800.1
Synonym Sb02g042960
Functional annotation alpha-galactosidase precursor, putative, expressed
UniProt C5X5L7
Pfam PF16499
Panther DB PTHR11452 PTHR11452:SF33
NCBI CDD -
KEGG Orthology K07407; E3.2.1.22B, galA, alpha-galactosidase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G56310 : Melibiase family protein
RAP-DB (Rice) LOC_Os07g48160.1 : alpha-galactosidase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a012314 , Zm00025a049154 , Zm00025a021657
Brachypodium KQK14638
Barley HORVU2Hr1G017900.1 , HORVU2Hr1G017880.4 , HORVU2Hr1G017880.5 , HORVU2Hr1G017880.6 , HORVU2Hr1G017880.7 , HORVU2Hr1G017880.1 , HORVU2Hr1G017880.3 , HORVU2Hr1G017880.8
Wheat TraesCS2D02G105500 , TraesCS2D02G105500 , TraesCS2D02G105500 , TraesCS2A02G105900 , TraesCS2A02G105900 , TraesCS2B02G122900
Populus -


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cDNA sequences
Sobic.002G417800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G135800 CUE domain containing protein, expressed -
2 Sobic.008G078300 la domain containing protein, expressed K15191: La-related protein 7
3 Sobic.002G396000 XPA-binding protein 2, putative, expressed K12867: SYF1, pre-mRNA-splicing factor SYF1
4 Sobic.002G053000 expressed protein -
5 Sobic.006G128900 cyclin-dependent kinase G-2, putative, expressed K08818: cell division cycle 2-like
6 Sobic.004G018300 expressed protein K06970: 23S rRNA (adenine1618-N6)-methyltransferase
7 Sobic.003G267800 ranBP1 domain containing protein, expressed K15304: Ran-binding protein 3
8 Sobic.001G292200 dynamin family protein, putative, expressed -
9 Sobic.001G081000 nucleotide-binding protein-like, putative, expressed K03593: mrp, ATP-binding protein involved in chromosome partitioning
10 Sobic.009G210500 expressed protein -
11 Sobic.006G133800 myb-like DNA-binding domain containing protein, expressed -
12 Sobic.009G175900 KH domain-containing protein, putative, expressed K14945: protein quaking
13 Sobic.008G024600 expressed protein -
14 Sobic.002G158700 TATA binding protein-associated factor, putative, expressed K03131: transcription initiation factor TFIID subunit 6
15 Sobic.002G300400 serine/threonine-protein kinase CTR1, putative, expressed -
16 Sobic.003G113200 5-nucleotidase domain-containing protein, putative, expressed -
17 Sobic.003G001000 - -
18 Sobic.010G056200 WD-40 repeat family protein, putative, expressed -
19 Sobic.003G280800 RNA recognition motif family protein, expressed K13094: RNA-binding protein 5/10
20 Sobic.004G031700 expressed protein -


Gene co-expression network
sample Sobic002G417800 Sobic002G417800 Sobic009G135800 Sobic009G135800 Sobic002G417800--Sobic009G135800 Sobic008G078300 Sobic008G078300 Sobic002G417800--Sobic008G078300 Sobic002G396000 Sobic002G396000 Sobic002G417800--Sobic002G396000 Sobic002G053000 Sobic002G053000 Sobic002G417800--Sobic002G053000 Sobic006G128900 Sobic006G128900 Sobic002G417800--Sobic006G128900 Sobic004G018300 Sobic004G018300 Sobic002G417800--Sobic004G018300 Sobic003G267800 Sobic003G267800 Sobic002G417800--Sobic003G267800 Sobic001G292200 Sobic001G292200 Sobic002G417800--Sobic001G292200 Sobic001G081000 Sobic001G081000 Sobic002G417800--Sobic001G081000 Sobic004G031700 Sobic004G031700 Sobic009G135800--Sobic004G031700 Sobic002G340100 Sobic002G340100 Sobic009G135800--Sobic002G340100 Sobic008G024600 Sobic008G024600 Sobic009G135800--Sobic008G024600 Sobic009G135800--Sobic006G128900 Sobic009G135800--Sobic002G053000 Sobic003G445400 Sobic003G445400 Sobic009G135800--Sobic003G445400 Sobic002G158700 Sobic002G158700 Sobic009G135800--Sobic002G158700 Sobic006G173100 Sobic006G173100 Sobic009G135800--Sobic006G173100 Sobic009G000500 Sobic009G000500 Sobic009G135800--Sobic009G000500 Sobic003G258900 Sobic003G258900 Sobic008G078300--Sobic003G258900 Sobic008G078300--Sobic002G396000 Sobic008G078300--Sobic001G081000 Sobic008G078300--Sobic002G417800 Sobic008G078300--Sobic004G018300 Sobic003G221600 Sobic003G221600 Sobic008G078300--Sobic003G221600 Sobic001G498200 Sobic001G498200 Sobic008G078300--Sobic001G498200 Sobic003G018900 Sobic003G018900 Sobic008G078300--Sobic003G018900 Sobic009G046700 Sobic009G046700 Sobic008G078300--Sobic009G046700 Sobic002G396000--Sobic002G158700 Sobic002G396000--Sobic006G128900 Sobic007G096000 Sobic007G096000 Sobic002G396000--Sobic007G096000 Sobic003G280800 Sobic003G280800 Sobic002G396000--Sobic003G280800 Sobic001G511500 Sobic001G511500 Sobic002G396000--Sobic001G511500 Sobic009G210500 Sobic009G210500 Sobic002G396000--Sobic009G210500 Sobic002G396000--Sobic004G018300 Sobic008G131000 Sobic008G131000 Sobic002G396000--Sobic008G131000 Sobic001G090400 Sobic001G090400 Sobic002G396000--Sobic001G090400 Sobic002G053000--Sobic008G024600 Sobic002G053000--Sobic003G280800 Sobic006G209850 Sobic006G209850 Sobic002G053000--Sobic006G209850 Sobic002G053000--Sobic006G128900 Sobic002G053000--Sobic009G210500 Sobic010G129200 Sobic010G129200 Sobic002G053000--Sobic010G129200 Sobic002G053000--Sobic003G445400 Sobic007G167500 Sobic007G167500 Sobic002G053000--Sobic007G167500 Sobic005G045300 Sobic005G045300 Sobic002G053000--Sobic005G045300 Sobic006G128900--Sobic006G209850 Sobic006G128900--Sobic001G511500 Sobic006G128900--Sobic004G031700 Sobic006G128900--Sobic009G000500 Sobic006G128900--Sobic001G090400 Sobic006G128900--Sobic003G445400 Sobic003G268300 Sobic003G268300 Sobic006G128900--Sobic003G268300 Sobic001G477800 Sobic001G477800 Sobic006G128900--Sobic001G477800 Sobic002G157000 Sobic002G157000 Sobic006G128900--Sobic002G157000 Sobic004G087600 Sobic004G087600 Sobic004G018300--Sobic004G087600 Sobic001G167200 Sobic001G167200 Sobic004G018300--Sobic001G167200 Sobic008G011100 Sobic008G011100 Sobic004G018300--Sobic008G011100 Sobic004G018300--Sobic002G158700 Sobic004G018300--Sobic002G396000 Sobic004G018300--Sobic001G081000 Sobic008G083000 Sobic008G083000 Sobic004G018300--Sobic008G083000 Sobic009G126400 Sobic009G126400 Sobic004G018300--Sobic009G126400 Sobic004G223600 Sobic004G223600 Sobic004G018300--Sobic004G223600 Sobic005G133500 Sobic005G133500 Sobic003G267800--Sobic005G133500 Sobic003G267800--Sobic003G258900 Sobic002G058400 Sobic002G058400 Sobic003G267800--Sobic002G058400 Sobic003G239900 Sobic003G239900 Sobic003G267800--Sobic003G239900 Sobic009G175900 Sobic009G175900 Sobic003G267800--Sobic009G175900 Sobic003G267800--Sobic002G158700 Sobic003G440700 Sobic003G440700 Sobic003G267800--Sobic003G440700 Sobic006G217200 Sobic006G217200 Sobic003G267800--Sobic006G217200 Sobic003G267800--Sobic002G396000 Sobic001G292200--Sobic002G340100 Sobic002G134200 Sobic002G134200 Sobic001G292200--Sobic002G134200 Sobic001G292200--Sobic003G280800 Sobic001G292200--Sobic002G053000 Sobic005G032800 Sobic005G032800 Sobic001G292200--Sobic005G032800 Sobic001G292200--Sobic008G024600 Sobic003G001100 Sobic003G001100 Sobic001G292200--Sobic003G001100 Sobic001G178700 Sobic001G178700 Sobic001G292200--Sobic001G178700 Sobic001G071400 Sobic001G071400 Sobic001G292200--Sobic001G071400 Sobic001G081000--Sobic004G018300 Sobic001G081000--Sobic003G221600 Sobic001G081000--Sobic008G131000 Sobic003G141500 Sobic003G141500 Sobic001G081000--Sobic003G141500 Sobic008G014500 Sobic008G014500 Sobic001G081000--Sobic008G014500 Sobic001G081000--Sobic003G258900 Sobic001G081000--Sobic008G083000 Sobic007G220300 Sobic007G220300 Sobic001G081000--Sobic007G220300 Sobic009G145101 Sobic009G145101 Sobic001G081000--Sobic009G145101
Octagon: transcription factors


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