Gene annotation
Transcriptome id Sobic.003G426800.1
Synonym Sb03g045880
Functional annotation expressed protein
UniProt C5XHW2
Pfam PF09811
Panther DB PTHR18829 PTHR18829:SF0
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G34570 : Essential protein Yae1, N-terminal
RAP-DB (Rice) LOC_Os01g72200.1 : expressed protein
MaizeGDB (Corn) Zm00025a039136 , Zm00025a025991
Brachypodium -
Barley -
Wheat TraesCS7A02G054800 , TraesCS7A02G054800
Populus -


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cDNA sequences
Sobic.003G426800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G052900 biotin--protein ligase, putative, expressed K01942: biotin---protein ligase
2 Sobic.009G137200 DIP1, putative, expressed -
3 Sobic.006G182200 WD domain, G-beta repeat domain containing protein, expressed -
4 Sobic.004G006200 ferrochelatase-2, chloroplast precursor, putative, expressed K01772: hemH, protoporphyrin/coproporphyrin ferrochelatase
5 Sobic.004G264400 TBC domain containing protein, expressed -
6 Sobic.002G059300 OsFBX181 - F-box domain containing protein, expressed -
7 Sobic.009G113000 chaperone protein dnaJ 49, putative, expressed K09518: DnaJ homolog subfamily B member 12
8 Sobic.003G109100 decarboxylase, putative, expressed K01634: SGPL1, sphinganine-1-phosphate aldolase
9 Sobic.002G340100 GTPase-activating protein, putative, expressed K12486: stromal membrane-associated protein
10 Sobic.004G237400 cullin, putative, expressed K03869: cullin 3
11 Sobic.002G419800 structural constituent of ribosome, putative, expressed -
12 Sobic.001G107600 - K18328: lariat debranching enzyme
13 Sobic.001G137100 homeodomain protein, putative, expressed -
14 Sobic.001G270400 OsPOP20 - Putative Prolyl Oligopeptidase homologue, expressed -
15 Sobic.009G056200 arginyl-tRNA synthetase, putative, expressed K01887: RARS, arginyl-tRNA synthetase
16 Sobic.001G224600 peroxisome assembly protein 12, putative, expressed K13345: PEX12, peroxin-12
17 Sobic.004G339100 endoribonuclease, putative, expressed K06927: diphthine-ammonia ligase
18 Sobic.004G348300 Ser/Thr protein phosphatase family protein, putative, expressed K06269: serine/threonine-protein phosphatase PP1 catalytic subunit
19 Sobic.004G274200 ara54-like RING finger protein, putative, expressed K11971: RNF14, E3 ubiquitin-protein ligase RNF14
20 Sobic.006G160300 DNA binding protein, putative, expressed -


Gene co-expression network
sample Sobic003G426800 Sobic003G426800 Sobic004G052900 Sobic004G052900 Sobic003G426800--Sobic004G052900 Sobic009G137200 Sobic009G137200 Sobic003G426800--Sobic009G137200 Sobic006G182200 Sobic006G182200 Sobic003G426800--Sobic006G182200 Sobic004G006200 Sobic004G006200 Sobic003G426800--Sobic004G006200 Sobic004G264400 Sobic004G264400 Sobic003G426800--Sobic004G264400 Sobic002G059300 Sobic002G059300 Sobic003G426800--Sobic002G059300 Sobic009G113000 Sobic009G113000 Sobic003G426800--Sobic009G113000 Sobic003G109100 Sobic003G109100 Sobic003G426800--Sobic003G109100 Sobic002G340100 Sobic002G340100 Sobic003G426800--Sobic002G340100 Sobic004G052900--Sobic003G109100 Sobic007G024700 Sobic007G024700 Sobic004G052900--Sobic007G024700 Sobic003G100800 Sobic003G100800 Sobic004G052900--Sobic003G100800 Sobic007G172400 Sobic007G172400 Sobic004G052900--Sobic007G172400 Sobic004G052900--Sobic002G340100 Sobic002G419800 Sobic002G419800 Sobic004G052900--Sobic002G419800 Sobic006G245400 Sobic006G245400 Sobic004G052900--Sobic006G245400 Sobic001G248300 Sobic001G248300 Sobic004G052900--Sobic001G248300 Sobic009G094300 Sobic009G094300 Sobic004G052900--Sobic009G094300 Sobic007G078600 Sobic007G078600 Sobic009G137200--Sobic007G078600 Sobic003G394300 Sobic003G394300 Sobic009G137200--Sobic003G394300 Sobic009G137200--Sobic003G426800 Sobic009G179700 Sobic009G179700 Sobic009G137200--Sobic009G179700 Sobic001G498600 Sobic001G498600 Sobic009G137200--Sobic001G498600 Sobic008G067600 Sobic008G067600 Sobic009G137200--Sobic008G067600 Sobic003G084700 Sobic003G084700 Sobic009G137200--Sobic003G084700 Sobic004G057400 Sobic004G057400 Sobic009G137200--Sobic004G057400 Sobic009G135800 Sobic009G135800 Sobic009G137200--Sobic009G135800 Sobic004G274200 Sobic004G274200 Sobic006G182200--Sobic004G274200 Sobic001G473600 Sobic001G473600 Sobic006G182200--Sobic001G473600 Sobic001G016000 Sobic001G016000 Sobic006G182200--Sobic001G016000 Sobic004G353000 Sobic004G353000 Sobic006G182200--Sobic004G353000 Sobic001G360200 Sobic001G360200 Sobic006G182200--Sobic001G360200 Sobic010G116600 Sobic010G116600 Sobic006G182200--Sobic010G116600 Sobic001G466700 Sobic001G466700 Sobic006G182200--Sobic001G466700 Sobic004G339100 Sobic004G339100 Sobic006G182200--Sobic004G339100 Sobic002G283600 Sobic002G283600 Sobic006G182200--Sobic002G283600 Sobic002G132000 Sobic002G132000 Sobic004G006200--Sobic002G132000 Sobic004G295800 Sobic004G295800 Sobic004G006200--Sobic004G295800 Sobic004G006200--Sobic007G024700 Sobic007G062600 Sobic007G062600 Sobic004G006200--Sobic007G062600 Sobic004G006200--Sobic004G052900 Sobic004G006200--Sobic004G264400 Sobic002G424000 Sobic002G424000 Sobic004G006200--Sobic002G424000 Sobic001G199100 Sobic001G199100 Sobic004G006200--Sobic001G199100 Sobic003G012200 Sobic003G012200 Sobic004G006200--Sobic003G012200 Sobic001G109800 Sobic001G109800 Sobic004G264400--Sobic001G109800 Sobic004G264400--Sobic009G113000 Sobic004G264400--Sobic002G132000 Sobic004G264400--Sobic007G024700 Sobic004G331100 Sobic004G331100 Sobic004G264400--Sobic004G331100 Sobic006G115600 Sobic006G115600 Sobic004G264400--Sobic006G115600 Sobic001G065000 Sobic001G065000 Sobic004G264400--Sobic001G065000 Sobic004G264400--Sobic004G274200 Sobic007G075400 Sobic007G075400 Sobic004G264400--Sobic007G075400 Sobic009G123600 Sobic009G123600 Sobic002G059300--Sobic009G123600 Sobic001G121200 Sobic001G121200 Sobic002G059300--Sobic001G121200 Sobic001G067400 Sobic001G067400 Sobic002G059300--Sobic001G067400 Sobic009G056200 Sobic009G056200 Sobic002G059300--Sobic009G056200 Sobic004G206700 Sobic004G206700 Sobic002G059300--Sobic004G206700 Sobic004G348300 Sobic004G348300 Sobic002G059300--Sobic004G348300 Sobic002G347000 Sobic002G347000 Sobic002G059300--Sobic002G347000 Sobic010G027600 Sobic010G027600 Sobic002G059300--Sobic010G027600 Sobic006G199200 Sobic006G199200 Sobic002G059300--Sobic006G199200 Sobic003G118200 Sobic003G118200 Sobic009G113000--Sobic003G118200 Sobic009G113000--Sobic004G264400 Sobic009G053900 Sobic009G053900 Sobic009G113000--Sobic009G053900 Sobic009G113000--Sobic007G075400 Sobic004G347400 Sobic004G347400 Sobic009G113000--Sobic004G347400 Sobic009G113000--Sobic001G121200 Sobic009G113000--Sobic004G331100 Sobic004G200200 Sobic004G200200 Sobic009G113000--Sobic004G200200 Sobic001G146800 Sobic001G146800 Sobic009G113000--Sobic001G146800 Sobic003G109100--Sobic004G052900 Sobic003G109100--Sobic007G024700 Sobic001G270400 Sobic001G270400 Sobic003G109100--Sobic001G270400 Sobic003G109100--Sobic003G100800 Sobic003G109100--Sobic009G094300 Sobic003G109100--Sobic006G245400 Sobic001G137100 Sobic001G137100 Sobic003G109100--Sobic001G137100 Sobic003G109100--Sobic002G340100 Sobic010G205800 Sobic010G205800 Sobic003G109100--Sobic010G205800 Sobic001G292200 Sobic001G292200 Sobic002G340100--Sobic001G292200 Sobic001G071400 Sobic001G071400 Sobic002G340100--Sobic001G071400 Sobic002G340100--Sobic006G245400 Sobic002G315200 Sobic002G315200 Sobic002G340100--Sobic002G315200 Sobic002G340100--Sobic009G135800 Sobic001G114000 Sobic001G114000 Sobic002G340100--Sobic001G114000 Sobic007G217000 Sobic007G217000 Sobic002G340100--Sobic007G217000 Sobic002G340100--Sobic004G052900 Sobic001G474600 Sobic001G474600 Sobic002G340100--Sobic001G474600
Octagon: transcription factors


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