Gene annotation
Transcriptome id Sobic.003G084700.1
Synonym
Functional annotation -
UniProt A0A1B6Q210
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.003G084700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G107500 cyclin-dependent kinase, putative, expressed K08819: cyclin-dependent kinase 12/13
2 Sobic.007G078600 YT521-B, putative, expressed -
3 Sobic.009G065100 splicing factor, putative, expressed K12850: pre-mRNA-splicing factor 38B
4 Sobic.004G057400 copper-transporting ATPase, putative, expressed K17686: copA, ctpA, P-type Cu+ transporter
5 Sobic.008G067600 protein kinase PKN/PRK1, effector, putative, expressed -
6 Sobic.001G315100 TKL_IRAK_CrRLK1L-1.16 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
7 Sobic.001G090400 PHD-finger domain containing protein, putative, expressed K11346: inhibitor of growth protein 4
8 Sobic.004G271900 RMD5 homolog A, putative, expressed -
9 Sobic.009G215800 OsFBX173 - F-box domain containing protein, expressed -
10 Sobic.004G205600 bromodomain domain containing protein, expressed -
11 Sobic.001G281600 cyclin-dependent kinase E-1, putative, expressed K02208: cyclin-dependent kinase 8/11
12 Sobic.010G056200 WD-40 repeat family protein, putative, expressed -
13 Sobic.003G081000 transcription factor, putative, expressed K14431: transcription factor TGA
14 Sobic.003G202800 holocarboxylase synthetase, putative, expressed -
15 Sobic.004G084300 MYB family transcription factor, putative, expressed K11324: DMAP1, SWC4, DNA methyltransferase 1-associated protein 1
16 Sobic.009G157200 OsFBL23 - F-box domain and LRR containing protein, expressed K13463: coronatine-insensitive protein 1
17 Sobic.004G121100 expressed protein -
18 Sobic.002G350300 gamma response I protein, putative, expressed K13096: splicing factor 4
19 Sobic.006G200600 expressed protein -
20 Sobic.002G320500 MYB family transcription factor, putative, expressed -


Gene co-expression network
sample Sobic003G084700 Sobic003G084700 Sobic001G107500 Sobic001G107500 Sobic003G084700--Sobic001G107500 Sobic007G078600 Sobic007G078600 Sobic003G084700--Sobic007G078600 Sobic009G065100 Sobic009G065100 Sobic003G084700--Sobic009G065100 Sobic004G057400 Sobic004G057400 Sobic003G084700--Sobic004G057400 Sobic008G067600 Sobic008G067600 Sobic003G084700--Sobic008G067600 Sobic001G315100 Sobic001G315100 Sobic003G084700--Sobic001G315100 Sobic001G090400 Sobic001G090400 Sobic003G084700--Sobic001G090400 Sobic004G271900 Sobic004G271900 Sobic003G084700--Sobic004G271900 Sobic009G215800 Sobic009G215800 Sobic003G084700--Sobic009G215800 Sobic002G320500 Sobic002G320500 Sobic001G107500--Sobic002G320500 Sobic006G133800 Sobic006G133800 Sobic001G107500--Sobic006G133800 Sobic002G157000 Sobic002G157000 Sobic001G107500--Sobic002G157000 Sobic001G107500--Sobic009G065100 Sobic001G107500--Sobic001G090400 Sobic010G056200 Sobic010G056200 Sobic001G107500--Sobic010G056200 Sobic001G497300 Sobic001G497300 Sobic001G107500--Sobic001G497300 Sobic007G104800 Sobic007G104800 Sobic001G107500--Sobic007G104800 Sobic004G205600 Sobic004G205600 Sobic001G107500--Sobic004G205600 Sobic008G047800 Sobic008G047800 Sobic007G078600--Sobic008G047800 Sobic003G394300 Sobic003G394300 Sobic007G078600--Sobic003G394300 Sobic007G078600--Sobic003G084700 Sobic006G118700 Sobic006G118700 Sobic007G078600--Sobic006G118700 Sobic006G200600 Sobic006G200600 Sobic007G078600--Sobic006G200600 Sobic009G179700 Sobic009G179700 Sobic007G078600--Sobic009G179700 Sobic007G078500 Sobic007G078500 Sobic007G078600--Sobic007G078500 Sobic002G134200 Sobic002G134200 Sobic007G078600--Sobic002G134200 Sobic002G133400 Sobic002G133400 Sobic007G078600--Sobic002G133400 Sobic009G065100--Sobic002G320500 Sobic009G065100--Sobic002G157000 Sobic008G173900 Sobic008G173900 Sobic009G065100--Sobic008G173900 Sobic009G065100--Sobic009G215800 Sobic004G084300 Sobic004G084300 Sobic009G065100--Sobic004G084300 Sobic002G144933 Sobic002G144933 Sobic009G065100--Sobic002G144933 Sobic002G309800 Sobic002G309800 Sobic009G065100--Sobic002G309800 Sobic009G065100--Sobic001G107500 Sobic003G197800 Sobic003G197800 Sobic009G065100--Sobic003G197800 Sobic004G057400--Sobic001G090400 Sobic004G057400--Sobic004G205600 Sobic002G157300 Sobic002G157300 Sobic004G057400--Sobic002G157300 Sobic009G000500 Sobic009G000500 Sobic004G057400--Sobic009G000500 Sobic004G057400--Sobic008G067600 Sobic006G128900 Sobic006G128900 Sobic004G057400--Sobic006G128900 Sobic007G011400 Sobic007G011400 Sobic004G057400--Sobic007G011400 Sobic004G031700 Sobic004G031700 Sobic004G057400--Sobic004G031700 Sobic007G205800 Sobic007G205800 Sobic004G057400--Sobic007G205800 Sobic008G067600--Sobic001G090400 Sobic003G445400 Sobic003G445400 Sobic008G067600--Sobic003G445400 Sobic008G067600--Sobic004G084300 Sobic008G067600--Sobic002G157300 Sobic008G067600--Sobic001G315100 Sobic001G512700 Sobic001G512700 Sobic008G067600--Sobic001G512700 Sobic008G067600--Sobic009G000500 Sobic008G067600--Sobic004G057400 Sobic008G067600--Sobic008G047800 Sobic001G315100--Sobic008G067600 Sobic001G315100--Sobic001G090400 Sobic001G315100--Sobic003G084700 Sobic001G315100--Sobic004G084300 Sobic001G315100--Sobic002G157300 Sobic001G176200 Sobic001G176200 Sobic001G315100--Sobic001G176200 Sobic003G081000 Sobic003G081000 Sobic001G315100--Sobic003G081000 Sobic003G241200 Sobic003G241200 Sobic001G315100--Sobic003G241200 Sobic001G315100--Sobic004G057400 Sobic001G090400--Sobic008G067600 Sobic006G173100 Sobic006G173100 Sobic001G090400--Sobic006G173100 Sobic001G090400--Sobic004G057400 Sobic001G090400--Sobic001G176200 Sobic001G090400--Sobic002G320500 Sobic001G090400--Sobic009G000500 Sobic001G090400--Sobic002G157300 Sobic001G090400--Sobic004G205600 Sobic002G248400 Sobic002G248400 Sobic001G090400--Sobic002G248400 Sobic009G117400 Sobic009G117400 Sobic004G271900--Sobic009G117400 Sobic004G271900--Sobic007G205800 Sobic008G034600 Sobic008G034600 Sobic004G271900--Sobic008G034600 Sobic010G263800 Sobic010G263800 Sobic004G271900--Sobic010G263800 Sobic003G093600 Sobic003G093600 Sobic004G271900--Sobic003G093600 Sobic004G256600 Sobic004G256600 Sobic004G271900--Sobic004G256600 Sobic004G271900--Sobic007G011400 Sobic003G258400 Sobic003G258400 Sobic004G271900--Sobic003G258400 Sobic009G117300 Sobic009G117300 Sobic004G271900--Sobic009G117300 Sobic009G215800--Sobic009G065100 Sobic009G215800--Sobic004G084300 Sobic008G136200 Sobic008G136200 Sobic009G215800--Sobic008G136200 Sobic001G281600 Sobic001G281600 Sobic009G215800--Sobic001G281600 Sobic001G222500 Sobic001G222500 Sobic009G215800--Sobic001G222500 Sobic009G215800--Sobic001G107500 Sobic009G215800--Sobic003G084700 Sobic001G407200 Sobic001G407200 Sobic009G215800--Sobic001G407200 Sobic009G215800--Sobic008G067600
Octagon: transcription factors


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