Gene annotation
Transcriptome id Sobic.007G177300.2
Synonym Sb07g024910
Functional annotation kinetochore protein, putative, expressed
UniProt A0A1Z5RAD9
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology K11547; NDC80, HEC1, kinetochore protein NDC80
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G54630 : -
RAP-DB (Rice) LOC_Os08g36490.1 : kinetochore protein, putative, expressed
MaizeGDB (Corn) Zm00025a048143 , Zm00025a005696 , Zm00025a018270
Brachypodium KQK03911 , KQJ98599 , KQJ98419
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.007G177300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G129600 glucosidase II beta subunit-like domain containing protein, expressed K10088: protein OS-9
2 Sobic.001G467100 SURF1, putative, expressed K14998: SURF1, surfeit locus 1 family protein
3 Sobic.009G231700 GTP binding protein, putative, expressed -
4 Sobic.001G382600 expressed protein -
5 Sobic.010G020400 HEAT repeat family protein, putative, expressed K03456: serine/threonine-protein phosphatase 2A regulatory subunit A
6 Sobic.002G394600 peptidase, T1 family, putative, expressed K02727: 20S proteasome subunit alpha 7
7 Sobic.009G077600 glycosyl hydrolase family 47 domain contain protein, expressed K01230: MAN1A_C, mannosyl-oligosaccharide alpha-1,2-mannosidase
8 Sobic.002G014400 T-complex protein, putative, expressed K09497: T-complex protein 1 subunit epsilon
9 Sobic.008G103300 vacuolar protein sorting-associated protein 26, putative, expressed K18466: vacuolar protein sorting-associated protein 26
10 Sobic.003G363700 OsFBL5 - F-box domain and LRR containing protein, expressed -
11 Sobic.002G020700 WD domain, G-beta repeat domain containing protein, expressed K14018: PLAA, DOA1, phospholipase A-2-activating protein
12 Sobic.001G118200 CASP, putative, expressed K09313: homeobox protein cut-like
13 Sobic.001G341500 transcription initiation factor IID, putative, expressed K03133: TAF9B, transcription initiation factor TFIID subunit 9B
14 Sobic.001G099900 WD domain, G-beta repeat domain containing protein, expressed K14548: UTP4, U3 small nucleolar RNA-associated protein 4
15 Sobic.004G208500 eukaryotic translation initiation factor 2A, putative, expressed K15026: translation initiation factor 2A
16 Sobic.003G395300 TBC domain containing protein, expressed -
17 Sobic.008G055900 transmembrane 9 superfamily member, putative, expressed K17087: transmembrane 9 superfamily member 3
18 Sobic.009G192000 transcription initiation factor IIF beta subunit, putative, expressed K03139: TFIIF2, GTF2F2, transcription initiation factor TFIIF subunit beta
19 Sobic.002G423500 T-complex protein, putative, expressed K09498: T-complex protein 1 subunit zeta
20 Sobic.001G492200 OsFBK11 - F-box domain and kelch repeat containing protein, expressed -


Gene co-expression network
sample Sobic007G177300 Sobic007G177300 Sobic008G129600 Sobic008G129600 Sobic007G177300--Sobic008G129600 Sobic001G467100 Sobic001G467100 Sobic007G177300--Sobic001G467100 Sobic009G231700 Sobic009G231700 Sobic007G177300--Sobic009G231700 Sobic001G382600 Sobic001G382600 Sobic007G177300--Sobic001G382600 Sobic010G020400 Sobic010G020400 Sobic007G177300--Sobic010G020400 Sobic002G394600 Sobic002G394600 Sobic007G177300--Sobic002G394600 Sobic009G077600 Sobic009G077600 Sobic007G177300--Sobic009G077600 Sobic002G014400 Sobic002G014400 Sobic007G177300--Sobic002G014400 Sobic008G103300 Sobic008G103300 Sobic007G177300--Sobic008G103300 Sobic008G055900 Sobic008G055900 Sobic008G129600--Sobic008G055900 Sobic008G129600--Sobic007G177300 Sobic006G056200 Sobic006G056200 Sobic008G129600--Sobic006G056200 Sobic008G129600--Sobic008G103300 Sobic010G264000 Sobic010G264000 Sobic008G129600--Sobic010G264000 Sobic008G129600--Sobic001G467100 Sobic001G449900 Sobic001G449900 Sobic008G129600--Sobic001G449900 Sobic003G182300 Sobic003G182300 Sobic008G129600--Sobic003G182300 Sobic006G270600 Sobic006G270600 Sobic008G129600--Sobic006G270600 Sobic004G208500 Sobic004G208500 Sobic001G467100--Sobic004G208500 Sobic010G172400 Sobic010G172400 Sobic001G467100--Sobic010G172400 Sobic001G474400 Sobic001G474400 Sobic001G467100--Sobic001G474400 Sobic001G099900 Sobic001G099900 Sobic001G467100--Sobic001G099900 Sobic003G222700 Sobic003G222700 Sobic001G467100--Sobic003G222700 Sobic007G145400 Sobic007G145400 Sobic001G467100--Sobic007G145400 Sobic005G114500 Sobic005G114500 Sobic001G467100--Sobic005G114500 Sobic001G161700 Sobic001G161700 Sobic001G467100--Sobic001G161700 Sobic005G110499 Sobic005G110499 Sobic001G467100--Sobic005G110499 Sobic002G020700 Sobic002G020700 Sobic009G231700--Sobic002G020700 Sobic003G099300 Sobic003G099300 Sobic009G231700--Sobic003G099300 Sobic009G231700--Sobic007G177300 Sobic002G423500 Sobic002G423500 Sobic009G231700--Sobic002G423500 SobicK004100 SobicK004100 Sobic009G231700--SobicK004100 Sobic004G039600 Sobic004G039600 Sobic009G231700--Sobic004G039600 Sobic009G231700--Sobic001G382600 Sobic001G118200 Sobic001G118200 Sobic009G231700--Sobic001G118200 Sobic010G269100 Sobic010G269100 Sobic009G231700--Sobic010G269100 Sobic002G299000 Sobic002G299000 Sobic001G382600--Sobic002G299000 Sobic002G008800 Sobic002G008800 Sobic001G382600--Sobic002G008800 Sobic001G065100 Sobic001G065100 Sobic001G382600--Sobic001G065100 Sobic001G382600--Sobic001G118200 Sobic002G111600 Sobic002G111600 Sobic001G382600--Sobic002G111600 Sobic003G337300 Sobic003G337300 Sobic001G382600--Sobic003G337300 Sobic001G382600--Sobic002G020700 Sobic001G382600--Sobic008G055900 Sobic006G131000 Sobic006G131000 Sobic001G382600--Sobic006G131000 Sobic010G020400--Sobic002G020700 Sobic001G049400 Sobic001G049400 Sobic010G020400--Sobic001G049400 Sobic003G338500 Sobic003G338500 Sobic010G020400--Sobic003G338500 Sobic001G014800 Sobic001G014800 Sobic010G020400--Sobic001G014800 Sobic010G020400--Sobic002G008800 Sobic010G020400--Sobic008G055900 Sobic008G033500 Sobic008G033500 Sobic010G020400--Sobic008G033500 Sobic001G333100 Sobic001G333100 Sobic010G020400--Sobic001G333100 Sobic010G223300 Sobic010G223300 Sobic010G020400--Sobic010G223300 Sobic002G341800 Sobic002G341800 Sobic002G394600--Sobic002G341800 Sobic006G044600 Sobic006G044600 Sobic002G394600--Sobic006G044600 Sobic002G394600--Sobic002G014400 Sobic001G251600 Sobic001G251600 Sobic002G394600--Sobic001G251600 Sobic009G190300 Sobic009G190300 Sobic002G394600--Sobic009G190300 Sobic004G194900 Sobic004G194900 Sobic002G394600--Sobic004G194900 Sobic001G404100 Sobic001G404100 Sobic002G394600--Sobic001G404100 Sobic002G394600--Sobic007G177300 Sobic004G310500 Sobic004G310500 Sobic002G394600--Sobic004G310500 Sobic003G209200 Sobic003G209200 Sobic009G077600--Sobic003G209200 Sobic009G077600--Sobic008G055900 Sobic006G260500 Sobic006G260500 Sobic009G077600--Sobic006G260500 Sobic004G207900 Sobic004G207900 Sobic009G077600--Sobic004G207900 Sobic004G100200 Sobic004G100200 Sobic009G077600--Sobic004G100200 Sobic006G239400 Sobic006G239400 Sobic009G077600--Sobic006G239400 Sobic007G005500 Sobic007G005500 Sobic009G077600--Sobic007G005500 Sobic003G050900 Sobic003G050900 Sobic009G077600--Sobic003G050900 Sobic009G077600--Sobic010G223300 Sobic004G047200 Sobic004G047200 Sobic002G014400--Sobic004G047200 Sobic004G326600 Sobic004G326600 Sobic002G014400--Sobic004G326600 Sobic002G014400--Sobic002G423500 Sobic005G163700 Sobic005G163700 Sobic002G014400--Sobic005G163700 Sobic002G014400--Sobic002G341800 Sobic001G460500 Sobic001G460500 Sobic002G014400--Sobic001G460500 Sobic002G014400--Sobic002G394600 Sobic002G014400--Sobic006G044600 Sobic002G014400--Sobic001G251600 Sobic008G103300--Sobic008G055900 Sobic002G371700 Sobic002G371700 Sobic008G103300--Sobic002G371700 Sobic003G046300 Sobic003G046300 Sobic008G103300--Sobic003G046300 Sobic003G132000 Sobic003G132000 Sobic008G103300--Sobic003G132000 Sobic005G074500 Sobic005G074500 Sobic008G103300--Sobic005G074500 Sobic001G114500 Sobic001G114500 Sobic008G103300--Sobic001G114500 Sobic001G145400 Sobic001G145400 Sobic008G103300--Sobic001G145400 Sobic006G200700 Sobic006G200700 Sobic008G103300--Sobic006G200700 Sobic002G295500 Sobic002G295500 Sobic008G103300--Sobic002G295500
Octagon: transcription factors


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