Gene annotation
Transcriptome id Sobic.004G339700.1
Synonym Sb04g036720
Functional annotation expressed protein
UniProt A0A194YSW1
Pfam -
Panther DB PTHR35492 PTHR35492:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G14310 : Transducin/WD40 repeat-like superfamily protein
RAP-DB (Rice) LOC_Os02g56520.1 : expressed protein
MaizeGDB (Corn) Zm00025a022553 , Zm00025a019896 , Zm00025a054915 , Zm00025a032835
Brachypodium KQJ95167 , KQJ95168
Barley HORVU6Hr1G089180.10 , HORVU6Hr1G089180.7 , HORVU6Hr1G089180.4 , HORVU6Hr1G089180.5 , HORVU6Hr1G089180.2 , HORVU6Hr1G089180.3 , HORVU6Hr1G089180.1 , HORVU6Hr1G089180.8 , HORVU6Hr1G089180.6 , HORVU6Hr1G089180.9
Wheat TraesCS6A02G379900 , TraesCS6B02G418500 , TraesCS6B02G418500 , TraesCS6D02G364500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G177600 DDT domain containing protein, putative, expressed -
2 Sobic.006G242500 CDT1B - Putative DNA replication initiation protein, expressed K10727: chromatin licensing and DNA replication factor 1
3 Sobic.003G231100 dnaJ domain containing protein, expressed -
4 Sobic.003G072500 transcription factor X1, putative, expressed -
5 Sobic.001G143600 pattern formation protein EMB30, putative, expressed K18443: golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
6 Sobic.003G250900 AAA-type ATPase family protein, putative, expressed -
7 Sobic.002G039800 EDM2, putative, expressed -
8 Sobic.003G431600 expressed protein -
9 Sobic.007G076200 VERNALIZATION-INSENSITIVE, putative, expressed -
10 Sobic.009G049200 Spc97 / Spc98 family protein, putative, expressed K16571: TUBGCP4, gamma-tubulin complex component 4
11 Sobic.010G227000 pentatricopeptide, putative, expressed -
12 Sobic.004G307900 expressed protein K10875: RAD54L, DNA repair and recombination protein RAD54 and RAD54-like protein
13 Sobic.010G233000 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
14 Sobic.002G318600 RNA recognition motif containing protein, putative, expressed -
15 Sobic.004G129600 expressed protein -
16 Sobic.006G266700 methyltransferase, putative, expressed K11437: type I protein arginine methyltransferase
17 Sobic.004G231200 amine oxidase, putative, expressed K11450: KDM1A, AOF2, [histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase
18 Sobic.001G039300 GTPase of unknown function domain containing protein, putative, expressed -
19 Sobic.003G323300 expressed protein -
20 Sobic.004G043750 - K16251: DNA-directed RNA polymerase V subunit 1


Gene co-expression network
sample Sobic004G339700 Sobic004G339700 Sobic004G177600 Sobic004G177600 Sobic004G339700--Sobic004G177600 Sobic006G242500 Sobic006G242500 Sobic004G339700--Sobic006G242500 Sobic003G231100 Sobic003G231100 Sobic004G339700--Sobic003G231100 Sobic003G072500 Sobic003G072500 Sobic004G339700--Sobic003G072500 Sobic001G143600 Sobic001G143600 Sobic004G339700--Sobic001G143600 Sobic003G250900 Sobic003G250900 Sobic004G339700--Sobic003G250900 Sobic002G039800 Sobic002G039800 Sobic004G339700--Sobic002G039800 Sobic003G431600 Sobic003G431600 Sobic004G339700--Sobic003G431600 Sobic007G076200 Sobic007G076200 Sobic004G339700--Sobic007G076200 Sobic010G233000 Sobic010G233000 Sobic004G177600--Sobic010G233000 Sobic003G388000 Sobic003G388000 Sobic004G177600--Sobic003G388000 Sobic003G221500 Sobic003G221500 Sobic004G177600--Sobic003G221500 Sobic004G177600--Sobic004G339700 Sobic008G063600 Sobic008G063600 Sobic004G177600--Sobic008G063600 Sobic004G256300 Sobic004G256300 Sobic004G177600--Sobic004G256300 Sobic004G307900 Sobic004G307900 Sobic004G177600--Sobic004G307900 Sobic001G462600 Sobic001G462600 Sobic004G177600--Sobic001G462600 Sobic004G322300 Sobic004G322300 Sobic004G177600--Sobic004G322300 Sobic006G242500--Sobic001G143600 Sobic001G210000 Sobic001G210000 Sobic006G242500--Sobic001G210000 Sobic004G198900 Sobic004G198900 Sobic006G242500--Sobic004G198900 Sobic003G274400 Sobic003G274400 Sobic006G242500--Sobic003G274400 Sobic009G045300 Sobic009G045300 Sobic006G242500--Sobic009G045300 Sobic002G318600 Sobic002G318600 Sobic006G242500--Sobic002G318600 Sobic006G242500--Sobic004G307900 Sobic006G188800 Sobic006G188800 Sobic006G242500--Sobic006G188800 Sobic001G397800 Sobic001G397800 Sobic006G242500--Sobic001G397800 Sobic003G231100--Sobic003G250900 Sobic002G320600 Sobic002G320600 Sobic003G231100--Sobic002G320600 Sobic002G214700 Sobic002G214700 Sobic003G231100--Sobic002G214700 Sobic003G369200 Sobic003G369200 Sobic003G231100--Sobic003G369200 Sobic003G393100 Sobic003G393100 Sobic003G231100--Sobic003G393100 Sobic008G015200 Sobic008G015200 Sobic003G231100--Sobic008G015200 Sobic008G192700 Sobic008G192700 Sobic003G231100--Sobic008G192700 Sobic009G190200 Sobic009G190200 Sobic003G231100--Sobic009G190200 Sobic004G129600 Sobic004G129600 Sobic003G231100--Sobic004G129600 Sobic008G070700 Sobic008G070700 Sobic003G072500--Sobic008G070700 Sobic003G072500--Sobic003G393100 Sobic009G057800 Sobic009G057800 Sobic003G072500--Sobic009G057800 Sobic002G112000 Sobic002G112000 Sobic003G072500--Sobic002G112000 Sobic001G175100 Sobic001G175100 Sobic003G072500--Sobic001G175100 Sobic006G106200 Sobic006G106200 Sobic003G072500--Sobic006G106200 Sobic002G317700 Sobic002G317700 Sobic003G072500--Sobic002G317700 Sobic007G161600 Sobic007G161600 Sobic003G072500--Sobic007G161600 Sobic003G129500 Sobic003G129500 Sobic003G072500--Sobic003G129500 Sobic001G385400 Sobic001G385400 Sobic001G143600--Sobic001G385400 Sobic009G049200 Sobic009G049200 Sobic001G143600--Sobic009G049200 Sobic002G219900 Sobic002G219900 Sobic001G143600--Sobic002G219900 Sobic001G143600--Sobic003G250900 Sobic003G435500 Sobic003G435500 Sobic001G143600--Sobic003G435500 Sobic001G143600--Sobic006G242500 Sobic010G065800 Sobic010G065800 Sobic001G143600--Sobic010G065800 Sobic006G236000 Sobic006G236000 Sobic001G143600--Sobic006G236000 Sobic001G507200 Sobic001G507200 Sobic001G143600--Sobic001G507200 Sobic001G437400 Sobic001G437400 Sobic003G250900--Sobic001G437400 Sobic002G150800 Sobic002G150800 Sobic003G250900--Sobic002G150800 Sobic003G250900--Sobic001G143600 Sobic003G314700 Sobic003G314700 Sobic003G250900--Sobic003G314700 Sobic010G138900 Sobic010G138900 Sobic003G250900--Sobic010G138900 Sobic003G250900--Sobic009G049200 Sobic006G265600 Sobic006G265600 Sobic003G250900--Sobic006G265600 Sobic002G051800 Sobic002G051800 Sobic003G250900--Sobic002G051800 Sobic006G280100 Sobic006G280100 Sobic003G250900--Sobic006G280100 Sobic010G262100 Sobic010G262100 Sobic002G039800--Sobic010G262100 Sobic002G039800--Sobic008G063600 Sobic002G052700 Sobic002G052700 Sobic002G039800--Sobic002G052700 Sobic002G039800--Sobic003G435500 Sobic003G123100 Sobic003G123100 Sobic002G039800--Sobic003G123100 Sobic010G188000 Sobic010G188000 Sobic002G039800--Sobic010G188000 Sobic004G038100 Sobic004G038100 Sobic002G039800--Sobic004G038100 Sobic002G039800--Sobic010G138900 Sobic002G039800--Sobic001G397800 Sobic003G135500 Sobic003G135500 Sobic003G431600--Sobic003G135500 Sobic001G203500 Sobic001G203500 Sobic003G431600--Sobic001G203500 Sobic008G092800 Sobic008G092800 Sobic003G431600--Sobic008G092800 Sobic006G181800 Sobic006G181800 Sobic003G431600--Sobic006G181800 Sobic003G431600--Sobic003G250900 Sobic001G300000 Sobic001G300000 Sobic003G431600--Sobic001G300000 Sobic001G541000 Sobic001G541000 Sobic003G431600--Sobic001G541000 Sobic002G426100 Sobic002G426100 Sobic003G431600--Sobic002G426100 Sobic003G431600--Sobic006G265600 Sobic010G024000 Sobic010G024000 Sobic007G076200--Sobic010G024000 Sobic006G193100 Sobic006G193100 Sobic007G076200--Sobic006G193100 Sobic009G202801 Sobic009G202801 Sobic007G076200--Sobic009G202801 Sobic010G222800 Sobic010G222800 Sobic007G076200--Sobic010G222800 Sobic007G087800 Sobic007G087800 Sobic007G076200--Sobic007G087800 Sobic007G076200--Sobic008G070700 Sobic002G074000 Sobic002G074000 Sobic007G076200--Sobic002G074000 Sobic003G031700 Sobic003G031700 Sobic007G076200--Sobic003G031700 Sobic001G008300 Sobic001G008300 Sobic007G076200--Sobic001G008300
Octagon: transcription factors


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