Gene annotation
Transcriptome id Sobic.002G240500.2
Synonym Sb02g027790, RPS3, RPM1
Functional annotation disease resistance protein RPM1, putative, expressed
UniProt A0A1W0W5I2
Pfam PF00931
Panther DB PTHR23155 PTHR23155:SF505
NCBI CDD KOG4658; Apoptotic ATPase
KEGG Orthology K13457; RPM1, disease resistance protein RPM1
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G07040 : NB-ARC domain-containing disease resistance protein
RAP-DB (Rice) LOC_Os09g30220.1 : disease resistance protein RPM1, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS2B02G058900 , TraesCSU02G177000 , TraesCSU02G024000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G291200 - -
2 Sobic.009G031800 - -
3 Sobic.007G192200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@LTPL80 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
4 Sobic.006G226000 expressed protein -
5 Sobic.001G320000 OsSub61 - Putative Subtilisin homologue, expressed -
6 Sobic.001G027500 haloacid dehalogenase-like hydrolase family protein, putative, expressed -
7 Sobic.010G214800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@membrane associated DUF588 domain containing protein, putative, expressed -
8 Sobic.010G037901 - -
9 Sobic.001G493100 LTPL82 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
10 Sobic.005G115350 - -
11 Sobic.007G160400 ZF-HD homeobox protein, putative, expressed -
12 Sobic.004G123200 MYB family transcription factor, putative, expressed -
13 Sobic.005G102350 - -
14 Sobic.008G178533 - -
15 Sobic.002G055800 zinc finger, C3HC4 type domain containing protein, expressed K16277: E3 ubiquitin-protein ligase DRIP
16 Sobic.005G196600 expressed protein -
17 Sobic.002G259200 POEI18 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
18 Sobic.006G135800 peroxidase precursor, putative, expressed K00430: peroxidase
19 Sobic.003G071901 - -
20 Sobic.002G240000 expressed protein K19307: 25S rRNA (uracil2634-N3)-methyltransferase


Gene co-expression network
sample Sobic002G240500 Sobic002G240500 Sobic004G291200 Sobic004G291200 Sobic002G240500--Sobic004G291200 Sobic009G031800 Sobic009G031800 Sobic002G240500--Sobic009G031800 Sobic007G192200 Sobic007G192200 Sobic002G240500--Sobic007G192200 Sobic006G226000 Sobic006G226000 Sobic002G240500--Sobic006G226000 Sobic001G320000 Sobic001G320000 Sobic002G240500--Sobic001G320000 Sobic001G027500 Sobic001G027500 Sobic002G240500--Sobic001G027500 Sobic010G214800 Sobic010G214800 Sobic002G240500--Sobic010G214800 Sobic010G037901 Sobic010G037901 Sobic002G240500--Sobic010G037901 Sobic001G493100 Sobic001G493100 Sobic002G240500--Sobic001G493100 Sobic004G123200 Sobic004G123200 Sobic004G291200--Sobic004G123200 Sobic009G012500 Sobic009G012500 Sobic004G291200--Sobic009G012500 Sobic010G024600 Sobic010G024600 Sobic004G291200--Sobic010G024600 Sobic002G266300 Sobic002G266300 Sobic004G291200--Sobic002G266300 Sobic006G217800 Sobic006G217800 Sobic004G291200--Sobic006G217800 Sobic009G241900 Sobic009G241900 Sobic004G291200--Sobic009G241900 Sobic005G078132 Sobic005G078132 Sobic004G291200--Sobic005G078132 Sobic005G021000 Sobic005G021000 Sobic004G291200--Sobic005G021000 Sobic003G427200 Sobic003G427200 Sobic004G291200--Sobic003G427200 Sobic009G031800--Sobic006G226000 Sobic007G160400 Sobic007G160400 Sobic009G031800--Sobic007G160400 Sobic009G031800--Sobic010G037901 Sobic009G031800--Sobic009G012500 Sobic005G126701 Sobic005G126701 Sobic009G031800--Sobic005G126701 Sobic001G254700 Sobic001G254700 Sobic009G031800--Sobic001G254700 Sobic006G083900 Sobic006G083900 Sobic009G031800--Sobic006G083900 Sobic007G025600 Sobic007G025600 Sobic009G031800--Sobic007G025600 Sobic001G534200 Sobic001G534200 Sobic009G031800--Sobic001G534200 Sobic005G036200 Sobic005G036200 Sobic007G192200--Sobic005G036200 Sobic006G135800 Sobic006G135800 Sobic007G192200--Sobic006G135800 Sobic003G140800 Sobic003G140800 Sobic007G192200--Sobic003G140800 Sobic009G002200 Sobic009G002200 Sobic007G192200--Sobic009G002200 Sobic007G192200--Sobic006G226000 Sobic009G012600 Sobic009G012600 Sobic007G192200--Sobic009G012600 Sobic004G242200 Sobic004G242200 Sobic007G192200--Sobic004G242200 Sobic005G102800 Sobic005G102800 Sobic007G192200--Sobic005G102800 Sobic007G192200--Sobic009G031800 Sobic006G226000--Sobic009G031800 Sobic006G226000--Sobic007G160400 Sobic006G226000--Sobic010G037901 Sobic002G055800 Sobic002G055800 Sobic006G226000--Sobic002G055800 Sobic002G256900 Sobic002G256900 Sobic006G226000--Sobic002G256900 Sobic006G226000--Sobic004G123200 Sobic003G086800 Sobic003G086800 Sobic006G226000--Sobic003G086800 Sobic002G240000 Sobic002G240000 Sobic006G226000--Sobic002G240000 Sobic001G136400 Sobic001G136400 Sobic006G226000--Sobic001G136400 Sobic007G097100 Sobic007G097100 Sobic001G320000--Sobic007G097100 Sobic001G320000--Sobic007G160400 Sobic001G320000--Sobic001G493100 Sobic001G320000--Sobic010G214800 Sobic001G320000--Sobic009G031800 Sobic001G320000--Sobic006G226000 Sobic001G320000--Sobic002G055800 Sobic001G320000--Sobic006G135800 Sobic004G142400 Sobic004G142400 Sobic001G320000--Sobic004G142400 Sobic010G257000 Sobic010G257000 Sobic001G027500--Sobic010G257000 Sobic002G168000 Sobic002G168000 Sobic001G027500--Sobic002G168000 Sobic008G063600 Sobic008G063600 Sobic001G027500--Sobic008G063600 Sobic004G222200 Sobic004G222200 Sobic001G027500--Sobic004G222200 Sobic001G027500--Sobic006G226000 Sobic006G262501 Sobic006G262501 Sobic001G027500--Sobic006G262501 Sobic001G027500--Sobic002G055800 Sobic007G187700 Sobic007G187700 Sobic001G027500--Sobic007G187700 Sobic005G153000 Sobic005G153000 Sobic001G027500--Sobic005G153000 Sobic010G214800--Sobic001G320000 Sobic010G214800--Sobic001G493100 Sobic010G214800--Sobic009G031800 Sobic010G214800--Sobic007G160400 Sobic010G214800--Sobic006G226000 Sobic002G010000 Sobic002G010000 Sobic010G214800--Sobic002G010000 Sobic005G054900 Sobic005G054900 Sobic010G214800--Sobic005G054900 Sobic010G214800--Sobic004G291200 Sobic010G214800--Sobic007G097100 Sobic005G196600 Sobic005G196600 Sobic010G037901--Sobic005G196600 Sobic010G037901--Sobic006G226000 Sobic010G037901--Sobic003G086800 Sobic010G037901--Sobic009G031800 Sobic009G188600 Sobic009G188600 Sobic010G037901--Sobic009G188600 Sobic010G037901--Sobic005G153000 Sobic010G037901--Sobic006G135800 Sobic010G037901--Sobic007G160400 Sobic004G282601 Sobic004G282601 Sobic010G037901--Sobic004G282601 Sobic006G172000 Sobic006G172000 Sobic001G493100--Sobic006G172000 Sobic001G493100--Sobic006G135800 Sobic001G493100--Sobic006G226000 Sobic006G041700 Sobic006G041700 Sobic001G493100--Sobic006G041700 Sobic006G197400 Sobic006G197400 Sobic001G493100--Sobic006G197400 Sobic001G493100--Sobic007G160400 Sobic001G493100--Sobic010G037901 Sobic001G493100--Sobic003G086800 Sobic001G493100--Sobic009G031800
Octagon: transcription factors


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