Gene annotation
Transcriptome id Sobic.009G060600.1
Synonym
Functional annotation -
UniProt A0A1B6P6V1
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.009G060600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G074940 - -
2 Sobic.002G177600 expressed protein -
3 Sobic.002G240000 expressed protein K19307: 25S rRNA (uracil2634-N3)-methyltransferase
4 Sobic.005G021000 AP2 domain containing protein, expressed K09285: OVM, AP2-like factor, ANT lineage
5 Sobic.004G347500 2-phosphoglycerate kinase-related, putative, expressed -
6 Sobic.004G301800 vacuolar-processing enzyme precursor, putative, expressed K01369: legumain
7 Sobic.002G393100 dehydrogenase/reductase, putative, expressed -
8 Sobic.001G380800 cupin domain containing protein, expressed -
9 Sobic.006G208000 DNA repair ATPase-related, putative, expressed -
10 Sobic.004G164800 poly synthetase 3, putative, expressed K10798: poly [ADP-ribose] polymerase 2/3/4
11 Sobic.003G437400 The major cationic peroxidase in sorghum grain (SPC4)(PubMedID : 16650004)@peroxidase precursor, putative, expressed K00430: peroxidase
12 Sobic.003G419500 xylanase inhibitor, putative, expressed -
13 Sobic.003G140800 expressed protein -
14 Sobic.003G395000 cysteine proteinase EP-B 1 precursor, putative, expressed -
15 Sobic.006G248100 lipase, putative, expressed -
16 Sobic.001G208500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09873: aquaporin TIP
17 Sobic.004G281700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@DUF1264 domain containing protein, putative, expressed -
18 Sobic.010G142900 oleosin, putative, expressed -
19 Sobic.003G098800 osMFT2 MFT-Like2 homologous to Mother of FT and TFL1 gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed -
20 Sobic.009G037100 oxidoreductase, short chain dehydrogenase/reductase family protein, putative, expressed -


Gene co-expression network
sample Sobic009G060600 Sobic009G060600 Sobic010G074940 Sobic010G074940 Sobic009G060600--Sobic010G074940 Sobic002G177600 Sobic002G177600 Sobic009G060600--Sobic002G177600 Sobic002G240000 Sobic002G240000 Sobic009G060600--Sobic002G240000 Sobic005G021000 Sobic005G021000 Sobic009G060600--Sobic005G021000 Sobic004G347500 Sobic004G347500 Sobic009G060600--Sobic004G347500 Sobic004G301800 Sobic004G301800 Sobic009G060600--Sobic004G301800 Sobic002G393100 Sobic002G393100 Sobic009G060600--Sobic002G393100 Sobic001G380800 Sobic001G380800 Sobic009G060600--Sobic001G380800 Sobic006G208000 Sobic006G208000 Sobic009G060600--Sobic006G208000 Sobic001G418500 Sobic001G418500 Sobic010G074940--Sobic001G418500 Sobic010G074940--Sobic004G301800 Sobic010G074940--Sobic001G380800 Sobic010G142900 Sobic010G142900 Sobic010G074940--Sobic010G142900 Sobic010G074940--Sobic002G393100 Sobic002G401400 Sobic002G401400 Sobic010G074940--Sobic002G401400 Sobic001G544400 Sobic001G544400 Sobic010G074940--Sobic001G544400 Sobic004G164800 Sobic004G164800 Sobic010G074940--Sobic004G164800 Sobic003G295600 Sobic003G295600 Sobic010G074940--Sobic003G295600 Sobic002G177600--Sobic004G347500 Sobic007G191500 Sobic007G191500 Sobic002G177600--Sobic007G191500 Sobic002G177600--Sobic005G021000 Sobic003G395000 Sobic003G395000 Sobic002G177600--Sobic003G395000 Sobic010G125000 Sobic010G125000 Sobic002G177600--Sobic010G125000 Sobic002G197700 Sobic002G197700 Sobic002G177600--Sobic002G197700 Sobic008G159000 Sobic008G159000 Sobic002G177600--Sobic008G159000 Sobic001G165600 Sobic001G165600 Sobic002G177600--Sobic001G165600 Sobic002G211300 Sobic002G211300 Sobic002G177600--Sobic002G211300 Sobic002G240000--Sobic005G021000 Sobic001G254800 Sobic001G254800 Sobic002G240000--Sobic001G254800 Sobic001G534200 Sobic001G534200 Sobic002G240000--Sobic001G534200 Sobic008G149300 Sobic008G149300 Sobic002G240000--Sobic008G149300 Sobic009G246250 Sobic009G246250 Sobic002G240000--Sobic009G246250 Sobic006G083900 Sobic006G083900 Sobic002G240000--Sobic006G083900 Sobic010G053400 Sobic010G053400 Sobic002G240000--Sobic010G053400 Sobic007G025600 Sobic007G025600 Sobic002G240000--Sobic007G025600 Sobic004G349550 Sobic004G349550 Sobic002G240000--Sobic004G349550 Sobic005G021000--Sobic001G254800 Sobic006G217800 Sobic006G217800 Sobic005G021000--Sobic006G217800 Sobic003G443400 Sobic003G443400 Sobic005G021000--Sobic003G443400 Sobic005G021000--Sobic007G025600 Sobic005G021000--Sobic008G149300 Sobic005G021000--Sobic001G534200 Sobic009G103800 Sobic009G103800 Sobic005G021000--Sobic009G103800 Sobic006G167700 Sobic006G167700 Sobic005G021000--Sobic006G167700 Sobic001G166900 Sobic001G166900 Sobic005G021000--Sobic001G166900 Sobic004G347500--Sobic005G021000 Sobic004G347500--Sobic002G177600 Sobic004G347500--Sobic002G240000 Sobic001G004600 Sobic001G004600 Sobic004G347500--Sobic001G004600 Sobic004G347500--Sobic001G534200 Sobic002G232900 Sobic002G232900 Sobic004G347500--Sobic002G232900 Sobic004G347500--Sobic007G191500 Sobic004G347500--Sobic006G217800 Sobic001G386600 Sobic001G386600 Sobic004G347500--Sobic001G386600 Sobic004G301800--Sobic001G380800 Sobic004G301800--Sobic010G142900 Sobic004G301800--Sobic003G295600 Sobic004G301800--Sobic001G418500 Sobic004G281700 Sobic004G281700 Sobic004G301800--Sobic004G281700 Sobic003G283700 Sobic003G283700 Sobic004G301800--Sobic003G283700 Sobic003G098800 Sobic003G098800 Sobic004G301800--Sobic003G098800 Sobic004G301800--Sobic002G401400 Sobic003G437400 Sobic003G437400 Sobic004G301800--Sobic003G437400 Sobic001G208500 Sobic001G208500 Sobic002G393100--Sobic001G208500 Sobic002G393100--Sobic004G164800 Sobic002G393100--Sobic002G197700 Sobic003G372600 Sobic003G372600 Sobic002G393100--Sobic003G372600 Sobic009G037100 Sobic009G037100 Sobic002G393100--Sobic009G037100 Sobic002G393100--Sobic008G159000 Sobic006G248100 Sobic006G248100 Sobic002G393100--Sobic006G248100 Sobic002G393100--Sobic002G211300 Sobic002G393100--Sobic001G380800 Sobic001G380800--Sobic004G301800 Sobic001G380800--Sobic010G142900 Sobic001G380800--Sobic003G295600 Sobic001G380800--Sobic001G418500 Sobic001G380800--Sobic003G437400 Sobic001G380800--Sobic002G401400 Sobic001G126900 Sobic001G126900 Sobic001G380800--Sobic001G126900 Sobic001G380800--Sobic002G393100 Sobic001G380800--Sobic003G098800 Sobic009G025500 Sobic009G025500 Sobic006G208000--Sobic009G025500 Sobic006G208000--Sobic001G004600 Sobic006G208000--Sobic001G534200 Sobic010G198900 Sobic010G198900 Sobic006G208000--Sobic010G198900 Sobic006G208000--Sobic005G021000 Sobic006G208000--Sobic009G246250 Sobic006G208000--Sobic008G149300 Sobic006G208000--Sobic006G167700 Sobic006G208000--Sobic009G103800
Octagon: transcription factors


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