Gene annotation
Transcriptome id Sobic.002G135400.1
Synonym Sb02g012070
Functional annotation Cupin domain containing protein, expressed
UniProt A0A1B6QB46
Pfam PF07883
Panther DB PTHR31238 PTHR31238:SF24
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G18980 : RmlC-like cupins superfamily protein
RAP-DB (Rice) LOC_Os09g39510.1 : Cupin domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium PNT65198
Barley HORVU4Hr1G001190.2 , HORVU4Hr1G001190.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G099000 - -
2 Sobic.001G366300 telomerase reverse transcriptase, putative, expressed K11126: TERT, telomerase reverse transcriptase
3 Sobic.003G243900 sphingolipid C4-hydroxylase SUR2, putative, expressed K04713: sphinganine C4-monooxygenase
4 Sobic.007G082500 MBTB20 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
5 Sobic.007G199800 BTB/POZ domain containing protein, expressed K10523: speckle-type POZ protein
6 Sobic.001G463600 - -
7 Sobic.002G040201 - -
8 Sobic.004G207766 - -
9 Sobic.003G407950 - -
10 Sobic.008G126400 heavy-metal-associated domain-containing protein, putative, expressed -
11 Sobic.010G111450 - -
12 Sobic.002G349200 expressed protein K12160: SUMO, small ubiquitin-related modifier
13 Sobic.001G166100 B3 DNA binding domain containing protein, expressed -
14 Sobic.001G405200 transcription factor like protein, putative, expressed -
15 Sobic.002G251050 - -
16 Sobic.001G136400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Desulfoglucosinolate sulfotransferase (At)(PubMedID : 27208977)@sulfotransferase domain containing protein, expressed -
17 Sobic.001G456400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@protein of unknown function DUF1675 domain containing protein, expressed -
18 Sobic.010G190800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF1680 domain containing protein, putative, expressed K09955: uncharacterized protein
19 Sobic.002G420400 - -
20 Sobic.009G121150 - -


Gene co-expression network
sample Sobic002G135400 Sobic002G135400 Sobic004G099000 Sobic004G099000 Sobic002G135400--Sobic004G099000 Sobic001G366300 Sobic001G366300 Sobic002G135400--Sobic001G366300 Sobic003G243900 Sobic003G243900 Sobic002G135400--Sobic003G243900 Sobic007G082500 Sobic007G082500 Sobic002G135400--Sobic007G082500 Sobic007G199800 Sobic007G199800 Sobic002G135400--Sobic007G199800 Sobic001G463600 Sobic001G463600 Sobic002G135400--Sobic001G463600 Sobic002G040201 Sobic002G040201 Sobic002G135400--Sobic002G040201 Sobic004G207766 Sobic004G207766 Sobic002G135400--Sobic004G207766 Sobic003G407950 Sobic003G407950 Sobic002G135400--Sobic003G407950 Sobic002G349200 Sobic002G349200 Sobic004G099000--Sobic002G349200 Sobic004G015050 Sobic004G015050 Sobic004G099000--Sobic004G015050 Sobic010G121900 Sobic010G121900 Sobic004G099000--Sobic010G121900 Sobic005G189600 Sobic005G189600 Sobic004G099000--Sobic005G189600 Sobic002G080500 Sobic002G080500 Sobic004G099000--Sobic002G080500 Sobic004G015150 Sobic004G015150 Sobic004G099000--Sobic004G015150 Sobic003G066600 Sobic003G066600 Sobic004G099000--Sobic003G066600 Sobic006G234200 Sobic006G234200 Sobic004G099000--Sobic006G234200 Sobic005G097201 Sobic005G097201 Sobic004G099000--Sobic005G097201 Sobic001G366300--Sobic001G463600 Sobic002G394466 Sobic002G394466 Sobic001G366300--Sobic002G394466 Sobic002G240000 Sobic002G240000 Sobic001G366300--Sobic002G240000 Sobic001G366300--Sobic002G040201 Sobic001G136400 Sobic001G136400 Sobic001G366300--Sobic001G136400 Sobic002G055800 Sobic002G055800 Sobic001G366300--Sobic002G055800 Sobic008G018100 Sobic008G018100 Sobic001G366300--Sobic008G018100 Sobic009G012500 Sobic009G012500 Sobic001G366300--Sobic009G012500 Sobic008G149300 Sobic008G149300 Sobic001G366300--Sobic008G149300 Sobic003G243900--Sobic001G463600 Sobic003G243900--Sobic002G040201 Sobic003G243900--Sobic002G394466 Sobic009G230000 Sobic009G230000 Sobic003G243900--Sobic009G230000 Sobic010G111450 Sobic010G111450 Sobic003G243900--Sobic010G111450 Sobic002G049900 Sobic002G049900 Sobic003G243900--Sobic002G049900 Sobic006G095900 Sobic006G095900 Sobic003G243900--Sobic006G095900 Sobic003G243900--Sobic001G366300 Sobic006G055900 Sobic006G055900 Sobic003G243900--Sobic006G055900 Sobic001G148450 Sobic001G148450 Sobic007G082500--Sobic001G148450 Sobic007G082500--Sobic004G207766 Sobic009G246250 Sobic009G246250 Sobic007G082500--Sobic009G246250 Sobic004G238801 Sobic004G238801 Sobic007G082500--Sobic004G238801 Sobic007G082500--Sobic001G136400 Sobic003G140800 Sobic003G140800 Sobic007G082500--Sobic003G140800 Sobic010G190800 Sobic010G190800 Sobic007G082500--Sobic010G190800 Sobic001G092800 Sobic001G092800 Sobic007G082500--Sobic001G092800 Sobic007G082500--Sobic002G055800 Sobic009G060600 Sobic009G060600 Sobic007G199800--Sobic009G060600 Sobic007G050800 Sobic007G050800 Sobic007G199800--Sobic007G050800 Sobic003G236150 Sobic003G236150 Sobic007G199800--Sobic003G236150 Sobic005G036200 Sobic005G036200 Sobic007G199800--Sobic005G036200 Sobic002G367200 Sobic002G367200 Sobic007G199800--Sobic002G367200 Sobic007G199800--Sobic002G055800 Sobic007G192200 Sobic007G192200 Sobic007G199800--Sobic007G192200 Sobic009G002200 Sobic009G002200 Sobic007G199800--Sobic009G002200 Sobic009G012600 Sobic009G012600 Sobic007G199800--Sobic009G012600 Sobic001G463600--Sobic002G394466 Sobic001G463600--Sobic002G040201 Sobic001G463600--Sobic003G243900 Sobic001G463600--Sobic001G366300 Sobic001G463600--Sobic010G111450 Sobic003G372600 Sobic003G372600 Sobic001G463600--Sobic003G372600 Sobic001G208500 Sobic001G208500 Sobic001G463600--Sobic001G208500 Sobic004G349550 Sobic004G349550 Sobic001G463600--Sobic004G349550 Sobic002G211300 Sobic002G211300 Sobic001G463600--Sobic002G211300 Sobic003G013950 Sobic003G013950 Sobic002G040201--Sobic003G013950 Sobic002G040201--Sobic010G111450 Sobic002G040201--Sobic001G463600 Sobic002G040201--Sobic002G394466 Sobic002G040201--Sobic003G243900 Sobic002G040201--Sobic001G366300 Sobic006G076100 Sobic006G076100 Sobic002G040201--Sobic006G076100 Sobic002G040201--Sobic009G230000 Sobic004G138600 Sobic004G138600 Sobic002G040201--Sobic004G138600 Sobic001G104500 Sobic001G104500 Sobic004G207766--Sobic001G104500 Sobic006G226000 Sobic006G226000 Sobic004G207766--Sobic006G226000 Sobic006G135800 Sobic006G135800 Sobic004G207766--Sobic006G135800 Sobic004G207766--Sobic002G055800 Sobic003G084200 Sobic003G084200 Sobic004G207766--Sobic003G084200 Sobic006G041700 Sobic006G041700 Sobic004G207766--Sobic006G041700 Sobic004G282601 Sobic004G282601 Sobic004G207766--Sobic004G282601 Sobic002G256900 Sobic002G256900 Sobic004G207766--Sobic002G256900 Sobic006G172000 Sobic006G172000 Sobic004G207766--Sobic006G172000 Sobic006G029250 Sobic006G029250 Sobic003G407950--Sobic006G029250 Sobic009G034250 Sobic009G034250 Sobic003G407950--Sobic009G034250 Sobic002G251050 Sobic002G251050 Sobic003G407950--Sobic002G251050 Sobic001G405200 Sobic001G405200 Sobic003G407950--Sobic001G405200 Sobic009G187150 Sobic009G187150 Sobic003G407950--Sobic009G187150 Sobic004G198350 Sobic004G198350 Sobic003G407950--Sobic004G198350 Sobic001G405450 Sobic001G405450 Sobic003G407950--Sobic001G405450 Sobic009G013850 Sobic009G013850 Sobic003G407950--Sobic009G013850 Sobic004G195650 Sobic004G195650 Sobic003G407950--Sobic004G195650
Octagon: transcription factors


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