Gene annotation
Transcriptome id Sobic.004G207766.1
Synonym -
Functional annotation -
UniProt A0A1Z5RP95
Pfam PF17035
Panther DB PTHR22880 PTHR22880:SF134
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G27260 : global transcription factor group E8
RAP-DB (Rice) LOC_Os08g03360.1 : ATBET9, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G104500 growth-regulating factor, putative, expressed -
2 Sobic.006G226000 expressed protein -
3 Sobic.006G135800 peroxidase precursor, putative, expressed K00430: peroxidase
4 Sobic.002G055800 zinc finger, C3HC4 type domain containing protein, expressed K16277: E3 ubiquitin-protein ligase DRIP
5 Sobic.003G084200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.006G041700 sex determination protein tasselseed-2, putative, expressed -
7 Sobic.004G282601 - -
8 Sobic.002G256900 acyl-ACP thioesterase, putative, expressed K10782: fatty acyl-ACP thioesterase A
9 Sobic.006G172000 pectinesterase, putative, expressed -
10 Sobic.007G097100 aspartic proteinase nepenthesin precursor, putative, expressed -
11 Sobic.006G247800 peroxidase precursor, putative, expressed K00430: peroxidase
12 Sobic.003G350400 thaumatin, putative, expressed -
13 Sobic.001G136400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Desulfoglucosinolate sulfotransferase (At)(PubMedID : 27208977)@sulfotransferase domain containing protein, expressed -
14 Sobic.001G493100 LTPL82 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
15 Sobic.001G148450 - -
16 Sobic.009G031800 - -
17 Sobic.007G187700 retinoblastoma-related protein-like, putative, expressed K04681: retinoblastoma-like protein 1
18 Sobic.010G037901 - -
19 Sobic.004G123200 MYB family transcription factor, putative, expressed -
20 Sobic.009G002200 formin-like protein 1 precursor, putative, expressed -


Gene co-expression network
sample Sobic004G207766 Sobic004G207766 Sobic001G104500 Sobic001G104500 Sobic004G207766--Sobic001G104500 Sobic006G226000 Sobic006G226000 Sobic004G207766--Sobic006G226000 Sobic006G135800 Sobic006G135800 Sobic004G207766--Sobic006G135800 Sobic002G055800 Sobic002G055800 Sobic004G207766--Sobic002G055800 Sobic003G084200 Sobic003G084200 Sobic004G207766--Sobic003G084200 Sobic006G041700 Sobic006G041700 Sobic004G207766--Sobic006G041700 Sobic004G282601 Sobic004G282601 Sobic004G207766--Sobic004G282601 Sobic002G256900 Sobic002G256900 Sobic004G207766--Sobic002G256900 Sobic006G172000 Sobic006G172000 Sobic004G207766--Sobic006G172000 Sobic001G104500--Sobic004G282601 Sobic006G275500 Sobic006G275500 Sobic001G104500--Sobic006G275500 Sobic007G187700 Sobic007G187700 Sobic001G104500--Sobic007G187700 Sobic004G317000 Sobic004G317000 Sobic001G104500--Sobic004G317000 Sobic001G104500--Sobic002G256900 Sobic002G168000 Sobic002G168000 Sobic001G104500--Sobic002G168000 Sobic001G104500--Sobic002G055800 Sobic006G016700 Sobic006G016700 Sobic001G104500--Sobic006G016700 Sobic010G037901 Sobic010G037901 Sobic001G104500--Sobic010G037901 Sobic009G031800 Sobic009G031800 Sobic006G226000--Sobic009G031800 Sobic007G160400 Sobic007G160400 Sobic006G226000--Sobic007G160400 Sobic006G226000--Sobic010G037901 Sobic006G226000--Sobic002G055800 Sobic006G226000--Sobic002G256900 Sobic004G123200 Sobic004G123200 Sobic006G226000--Sobic004G123200 Sobic003G086800 Sobic003G086800 Sobic006G226000--Sobic003G086800 Sobic002G240000 Sobic002G240000 Sobic006G226000--Sobic002G240000 Sobic001G136400 Sobic001G136400 Sobic006G226000--Sobic001G136400 Sobic001G493100 Sobic001G493100 Sobic006G135800--Sobic001G493100 Sobic006G135800--Sobic010G037901 Sobic006G135800--Sobic006G226000 Sobic006G135800--Sobic006G172000 Sobic009G002200 Sobic009G002200 Sobic006G135800--Sobic009G002200 Sobic005G153000 Sobic005G153000 Sobic006G135800--Sobic005G153000 Sobic007G192200 Sobic007G192200 Sobic006G135800--Sobic007G192200 Sobic006G135800--Sobic009G031800 Sobic006G135800--Sobic007G160400 Sobic002G055800--Sobic004G123200 Sobic002G055800--Sobic006G226000 Sobic002G055800--Sobic001G136400 Sobic001G366300 Sobic001G366300 Sobic002G055800--Sobic001G366300 Sobic003G001800 Sobic003G001800 Sobic002G055800--Sobic003G001800 Sobic009G012500 Sobic009G012500 Sobic002G055800--Sobic009G012500 Sobic006G083900 Sobic006G083900 Sobic002G055800--Sobic006G083900 Sobic002G055800--Sobic002G240000 Sobic004G142400 Sobic004G142400 Sobic002G055800--Sobic004G142400 Sobic003G084200--Sobic001G104500 Sobic007G050800 Sobic007G050800 Sobic003G084200--Sobic007G050800 Sobic003G084200--Sobic006G275500 Sobic005G157300 Sobic005G157300 Sobic003G084200--Sobic005G157300 Sobic003G084200--Sobic002G168000 Sobic003G084200--Sobic007G187700 Sobic003G244000 Sobic003G244000 Sobic003G084200--Sobic003G244000 Sobic003G084200--Sobic009G002200 Sobic001G456400 Sobic001G456400 Sobic003G084200--Sobic001G456400 Sobic006G041700--Sobic001G493100 Sobic006G041700--Sobic006G172000 Sobic006G197400 Sobic006G197400 Sobic006G041700--Sobic006G197400 Sobic006G041700--Sobic003G086800 Sobic001G246600 Sobic001G246600 Sobic006G041700--Sobic001G246600 Sobic002G175200 Sobic002G175200 Sobic006G041700--Sobic002G175200 Sobic004G330200 Sobic004G330200 Sobic006G041700--Sobic004G330200 Sobic003G350400 Sobic003G350400 Sobic006G041700--Sobic003G350400 Sobic002G259200 Sobic002G259200 Sobic006G041700--Sobic002G259200 Sobic004G282601--Sobic005G153000 Sobic004G282601--Sobic001G104500 Sobic004G282601--Sobic010G037901 Sobic009G077300 Sobic009G077300 Sobic004G282601--Sobic009G077300 Sobic004G282601--Sobic009G002200 Sobic004G282601--Sobic007G187700 Sobic003G290400 Sobic003G290400 Sobic004G282601--Sobic003G290400 Sobic006G221300 Sobic006G221300 Sobic004G282601--Sobic006G221300 Sobic005G196600 Sobic005G196600 Sobic004G282601--Sobic005G196600 Sobic002G256900--Sobic006G226000 Sobic002G256900--Sobic003G086800 Sobic002G256900--Sobic004G123200 Sobic004G347500 Sobic004G347500 Sobic002G256900--Sobic004G347500 Sobic002G256900--Sobic007G160400 Sobic002G256900--Sobic009G012500 Sobic002G256900--Sobic002G240000 Sobic001G203350 Sobic001G203350 Sobic002G256900--Sobic001G203350 Sobic005G021000 Sobic005G021000 Sobic002G256900--Sobic005G021000 Sobic006G172000--Sobic001G493100 Sobic003G251700 Sobic003G251700 Sobic006G172000--Sobic003G251700 Sobic006G172000--Sobic006G135800 Sobic006G172000--Sobic006G041700 Sobic007G097100 Sobic007G097100 Sobic006G172000--Sobic007G097100 Sobic006G172000--Sobic004G330200 Sobic006G172000--Sobic002G175200 Sobic006G172000--Sobic001G246600 Sobic006G172000--Sobic006G226000
Octagon: transcription factors


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