Gene annotation
Transcriptome id Sobic.010G248500.1
Synonym RPS3, RPM1
Functional annotation disease resistance protein RPM1, putative, expressed
UniProt A0A194YLA6
Pfam PF13855 PF00931
Panther DB PTHR23155 PTHR23155:SF558
NCBI CDD KOG4658; Apoptotic ATPase
KEGG Orthology K13457; RPM1, disease resistance protein RPM1
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G07040 : NB-ARC domain-containing disease resistance protein
RAP-DB (Rice) LOC_Os06g48520.1 : disease resistance protein RPM1, putative, expressed
MaizeGDB (Corn) Zm00025a018337 , Zm00025a018343 , Zm00025a018341
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G446400 receptor protein kinase CLAVATA1 precursor, putative, expressed -
2 Sobic.010G165900 - -
3 Sobic.008G127550 - -
4 Sobic.008G032800 heavy-metal-associated domain-containing protein, putative, expressed -
5 Sobic.003G204200 AP2/B3 transcription factor(PubMedID : 27016024)@B3 DNA binding domain containing protein, expressed -
6 Sobic.005G108225 - -
7 Sobic.002G255500 expressed protein -
8 Sobic.001G398400 expressed protein -
9 Sobic.004G198100 expressed protein -
10 Sobic.006G281400 expressed protein -
11 Sobic.003G393100 chromosome segregation protein, putative, expressed K06674: structural maintenance of chromosome 2
12 Sobic.010G017400 DLT(Ortholog in rice:Tong et al. (2012))(PubMedID : 31659927)@DELLA protein SLR1, putative, expressed -
13 Sobic.005G098900 - -
14 Sobic.009G143200 DUF630/DUF632 domains containing protein, putative, expressed -
15 Sobic.010G008900 kinesin motor domain containing protein, expressed K11498: centromeric protein E
16 Sobic.007G027900 chloroplast unusual positioning protein, putative, expressed -
17 Sobic.004G321400 BRUSHY 1, putative, expressed -
18 Sobic.002G317700 BNR/Asp-box repeat family protein, putative, expressed -
19 Sobic.002G190000 ZOS9-05 - C2H2 zinc finger protein, expressed -
20 Sobic.001G170800 "Transport protein(Ortholog in rice:Huang et al., 2012)"(PubMedID : 31659835)@transport protein-related, putative, expressed -


Gene co-expression network
sample Sobic010G248500 Sobic010G248500 Sobic001G446400 Sobic001G446400 Sobic010G248500--Sobic001G446400 Sobic010G165900 Sobic010G165900 Sobic010G248500--Sobic010G165900 Sobic008G127550 Sobic008G127550 Sobic010G248500--Sobic008G127550 Sobic008G032800 Sobic008G032800 Sobic010G248500--Sobic008G032800 Sobic003G204200 Sobic003G204200 Sobic010G248500--Sobic003G204200 Sobic005G108225 Sobic005G108225 Sobic010G248500--Sobic005G108225 Sobic002G255500 Sobic002G255500 Sobic010G248500--Sobic002G255500 Sobic001G398400 Sobic001G398400 Sobic010G248500--Sobic001G398400 Sobic004G198100 Sobic004G198100 Sobic010G248500--Sobic004G198100 Sobic007G027900 Sobic007G027900 Sobic001G446400--Sobic007G027900 Sobic009G143200 Sobic009G143200 Sobic001G446400--Sobic009G143200 Sobic002G296000 Sobic002G296000 Sobic001G446400--Sobic002G296000 Sobic001G446400--Sobic008G032800 Sobic003G393100 Sobic003G393100 Sobic001G446400--Sobic003G393100 Sobic001G054700 Sobic001G054700 Sobic001G446400--Sobic001G054700 Sobic005G005700 Sobic005G005700 Sobic001G446400--Sobic005G005700 Sobic001G446400--Sobic010G248500 Sobic007G162400 Sobic007G162400 Sobic001G446400--Sobic007G162400 Sobic010G165700 Sobic010G165700 Sobic010G165900--Sobic010G165700 Sobic002G101100 Sobic002G101100 Sobic010G165900--Sobic002G101100 Sobic005G098900 Sobic005G098900 Sobic010G165900--Sobic005G098900 Sobic010G165900--Sobic010G248500 Sobic001G318100 Sobic001G318100 Sobic010G165900--Sobic001G318100 Sobic003G401800 Sobic003G401800 Sobic010G165900--Sobic003G401800 Sobic010G165800 Sobic010G165800 Sobic010G165900--Sobic010G165800 Sobic008G090100 Sobic008G090100 Sobic010G165900--Sobic008G090100 Sobic010G165900--Sobic008G127550 Sobic003G420300 Sobic003G420300 Sobic008G127550--Sobic003G420300 Sobic002G320600 Sobic002G320600 Sobic008G127550--Sobic002G320600 Sobic003G226700 Sobic003G226700 Sobic008G127550--Sobic003G226700 Sobic006G281400 Sobic006G281400 Sobic008G127550--Sobic006G281400 Sobic003G292700 Sobic003G292700 Sobic008G127550--Sobic003G292700 Sobic001G051300 Sobic001G051300 Sobic008G127550--Sobic001G051300 Sobic004G243900 Sobic004G243900 Sobic008G127550--Sobic004G243900 Sobic007G139500 Sobic007G139500 Sobic008G127550--Sobic007G139500 Sobic009G052100 Sobic009G052100 Sobic008G127550--Sobic009G052100 Sobic008G032800--Sobic007G027900 Sobic009G101100 Sobic009G101100 Sobic008G032800--Sobic009G101100 Sobic001G477400 Sobic001G477400 Sobic008G032800--Sobic001G477400 Sobic006G124400 Sobic006G124400 Sobic008G032800--Sobic006G124400 Sobic008G032800--Sobic002G296000 Sobic010G017400 Sobic010G017400 Sobic008G032800--Sobic010G017400 Sobic008G032800--Sobic005G005700 Sobic008G032800--Sobic009G143200 Sobic004G273000 Sobic004G273000 Sobic008G032800--Sobic004G273000 Sobic002G237000 Sobic002G237000 Sobic003G204200--Sobic002G237000 Sobic004G321400 Sobic004G321400 Sobic003G204200--Sobic004G321400 Sobic001G105800 Sobic001G105800 Sobic003G204200--Sobic001G105800 Sobic010G255000 Sobic010G255000 Sobic003G204200--Sobic010G255000 Sobic004G035800 Sobic004G035800 Sobic003G204200--Sobic004G035800 Sobic009G172950 Sobic009G172950 Sobic003G204200--Sobic009G172950 Sobic010G092400 Sobic010G092400 Sobic003G204200--Sobic010G092400 Sobic004G190500 Sobic004G190500 Sobic003G204200--Sobic004G190500 Sobic002G223900 Sobic002G223900 Sobic003G204200--Sobic002G223900 Sobic005G108225--Sobic005G098900 Sobic010G168000 Sobic010G168000 Sobic005G108225--Sobic010G168000 Sobic005G127900 Sobic005G127900 Sobic005G108225--Sobic005G127900 Sobic008G047200 Sobic008G047200 Sobic005G108225--Sobic008G047200 Sobic005G108225--Sobic010G248500 Sobic005G108225--Sobic002G101100 Sobic005G108225--Sobic001G318100 Sobic005G108225--Sobic010G165900 Sobic008G120132 Sobic008G120132 Sobic005G108225--Sobic008G120132 Sobic001G170800 Sobic001G170800 Sobic002G255500--Sobic001G170800 Sobic010G008900 Sobic010G008900 Sobic002G255500--Sobic010G008900 Sobic001G416000 Sobic001G416000 Sobic002G255500--Sobic001G416000 Sobic004G257600 Sobic004G257600 Sobic002G255500--Sobic004G257600 Sobic003G314900 Sobic003G314900 Sobic002G255500--Sobic003G314900 Sobic002G255500--Sobic001G398400 Sobic001G177900 Sobic001G177900 Sobic002G255500--Sobic001G177900 Sobic003G260700 Sobic003G260700 Sobic002G255500--Sobic003G260700 Sobic005G000500 Sobic005G000500 Sobic002G255500--Sobic005G000500 Sobic001G398400--Sobic003G260700 Sobic001G398400--Sobic001G170800 Sobic008G006800 Sobic008G006800 Sobic001G398400--Sobic008G006800 Sobic009G184200 Sobic009G184200 Sobic001G398400--Sobic009G184200 Sobic004G271300 Sobic004G271300 Sobic001G398400--Sobic004G271300 Sobic001G398400--Sobic005G005700 Sobic010G105400 Sobic010G105400 Sobic001G398400--Sobic010G105400 Sobic001G398400--Sobic004G198100 Sobic001G398400--Sobic004G257600 Sobic004G198100--Sobic003G260700 Sobic010G119300 Sobic010G119300 Sobic004G198100--Sobic010G119300 Sobic004G198100--Sobic001G398400 Sobic008G125700 Sobic008G125700 Sobic004G198100--Sobic008G125700 Sobic004G198100--Sobic004G257600 Sobic004G198100--Sobic001G170800 Sobic004G339500 Sobic004G339500 Sobic004G198100--Sobic004G339500 Sobic002G313000 Sobic002G313000 Sobic004G198100--Sobic002G313000 Sobic004G198100--Sobic004G271300
Octagon: transcription factors


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