Gene annotation
Transcriptome id Sobic.006G249100.1
Synonym Sb06g031430
Functional annotation expressed protein
UniProt C5Y9K1
Pfam -
Panther DB PTHR34545 PTHR34545:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os04g56370.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium KQJ85050
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G171100 GDSL-like lipase/acylhydrolase, putative, expressed -
2 Sobic.002G064400 expressed protein -
3 Sobic.003G136400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptidyl-prolyl cis-trans isomerase, putative, expressed K03768: PPIB, peptidyl-prolyl cis-trans isomerase B (cyclophilin B)
4 Sobic.001G215300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aminotransferase, classes I and II, domain containing protein, expressed -
5 Sobic.004G109000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chalcone isomerase 3, putative, expressed -
6 Sobic.009G055900 fasciclin-like arabinogalactan protein 8 precursor, putative, expressed -
7 Sobic.002G190100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.004G253800 - -
9 Sobic.002G242600 expressed protein -
10 Sobic.003G383500 rhodanese-like, putative, expressed -
11 Sobic.001G188600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Rf1, mitochondrial precursor, putative, expressed -
12 Sobic.003G261200 formyl transferase, putative, expressed K00604: MTFMT, methionyl-tRNA formyltransferase
13 Sobic.004G044000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@EMB1303, putative, expressed -
14 Sobic.007G013400 ribosome recycling factor, putative, expressed K02838: frr, MRRF, ribosome recycling factor
15 Sobic.008G008500 protein phosphatase 2c, putative, expressed -
16 Sobic.010G246700 glycosyl hydrolases family 16, putative, expressed K14504: xyloglucan:xyloglucosyl transferase TCH4
17 Sobic.006G114300 pentatricopeptide, putative, expressed -
18 Sobic.008G066700 peroxidase precursor, putative, expressed K00430: peroxidase
19 Sobic.003G365900 ATOFP18/OFP18, putative, expressed -
20 Sobic.002G033000 GDSL-like lipase/acylhydrolase, putative, expressed -


Gene co-expression network
sample Sobic006G249100 Sobic006G249100 Sobic008G171100 Sobic008G171100 Sobic006G249100--Sobic008G171100 Sobic002G064400 Sobic002G064400 Sobic006G249100--Sobic002G064400 Sobic003G136400 Sobic003G136400 Sobic006G249100--Sobic003G136400 Sobic001G215300 Sobic001G215300 Sobic006G249100--Sobic001G215300 Sobic004G109000 Sobic004G109000 Sobic006G249100--Sobic004G109000 Sobic009G055900 Sobic009G055900 Sobic006G249100--Sobic009G055900 Sobic002G190100 Sobic002G190100 Sobic006G249100--Sobic002G190100 Sobic004G253800 Sobic004G253800 Sobic006G249100--Sobic004G253800 Sobic002G242600 Sobic002G242600 Sobic006G249100--Sobic002G242600 Sobic006G060500 Sobic006G060500 Sobic008G171100--Sobic006G060500 Sobic010G246700 Sobic010G246700 Sobic008G171100--Sobic010G246700 Sobic008G171100--Sobic006G249100 Sobic005G141000 Sobic005G141000 Sobic008G171100--Sobic005G141000 Sobic008G171100--Sobic009G055900 Sobic010G037600 Sobic010G037600 Sobic008G171100--Sobic010G037600 Sobic002G209800 Sobic002G209800 Sobic008G171100--Sobic002G209800 Sobic009G196200 Sobic009G196200 Sobic008G171100--Sobic009G196200 Sobic002G033000 Sobic002G033000 Sobic008G171100--Sobic002G033000 Sobic008G008500 Sobic008G008500 Sobic002G064400--Sobic008G008500 Sobic002G064400--Sobic002G190100 Sobic002G064400--Sobic001G215300 Sobic001G236800 Sobic001G236800 Sobic002G064400--Sobic001G236800 Sobic009G083300 Sobic009G083300 Sobic002G064400--Sobic009G083300 Sobic007G206100 Sobic007G206100 Sobic002G064400--Sobic007G206100 Sobic002G064400--Sobic002G242600 Sobic001G142400 Sobic001G142400 Sobic002G064400--Sobic001G142400 Sobic004G015700 Sobic004G015700 Sobic002G064400--Sobic004G015700 Sobic001G188600 Sobic001G188600 Sobic003G136400--Sobic001G188600 Sobic003G136400--Sobic001G215300 Sobic001G357200 Sobic001G357200 Sobic003G136400--Sobic001G357200 Sobic006G114300 Sobic006G114300 Sobic003G136400--Sobic006G114300 Sobic001G172300 Sobic001G172300 Sobic003G136400--Sobic001G172300 Sobic002G078000 Sobic002G078000 Sobic003G136400--Sobic002G078000 Sobic001G395300 Sobic001G395300 Sobic003G136400--Sobic001G395300 Sobic003G136400--Sobic006G249100 Sobic002G190800 Sobic002G190800 Sobic003G136400--Sobic002G190800 Sobic001G215300--Sobic004G109000 Sobic001G215300--Sobic001G142400 Sobic001G215300--Sobic002G064400 Sobic001G215300--Sobic002G190100 Sobic008G130700 Sobic008G130700 Sobic001G215300--Sobic008G130700 Sobic001G215300--Sobic001G236800 Sobic001G215300--Sobic001G188600 Sobic007G090415 Sobic007G090415 Sobic001G215300--Sobic007G090415 Sobic001G215300--Sobic006G114300 Sobic004G109000--Sobic001G188600 Sobic007G211100 Sobic007G211100 Sobic004G109000--Sobic007G211100 Sobic004G109000--Sobic006G114300 Sobic003G383500 Sobic003G383500 Sobic004G109000--Sobic003G383500 Sobic009G059100 Sobic009G059100 Sobic004G109000--Sobic009G059100 Sobic001G069500 Sobic001G069500 Sobic004G109000--Sobic001G069500 Sobic006G025700 Sobic006G025700 Sobic004G109000--Sobic006G025700 Sobic007G013400 Sobic007G013400 Sobic004G109000--Sobic007G013400 Sobic004G109000--Sobic001G215300 Sobic008G143600 Sobic008G143600 Sobic009G055900--Sobic008G143600 Sobic002G377300 Sobic002G377300 Sobic009G055900--Sobic002G377300 Sobic001G405000 Sobic001G405000 Sobic009G055900--Sobic001G405000 Sobic009G055900--Sobic004G109000 Sobic009G055900--Sobic009G059100 Sobic006G001400 Sobic006G001400 Sobic009G055900--Sobic006G001400 Sobic009G055900--Sobic006G060500 Sobic004G243400 Sobic004G243400 Sobic009G055900--Sobic004G243400 Sobic001G389600 Sobic001G389600 Sobic009G055900--Sobic001G389600 Sobic002G190100--Sobic006G025700 Sobic006G263800 Sobic006G263800 Sobic002G190100--Sobic006G263800 Sobic002G190100--Sobic008G130700 Sobic002G190100--Sobic002G242600 Sobic001G027600 Sobic001G027600 Sobic002G190100--Sobic001G027600 Sobic004G044000 Sobic004G044000 Sobic002G190100--Sobic004G044000 Sobic002G190100--Sobic004G253800 Sobic002G190100--Sobic009G059100 Sobic001G120000 Sobic001G120000 Sobic002G190100--Sobic001G120000 Sobic005G200600 Sobic005G200600 Sobic004G253800--Sobic005G200600 Sobic003G157500 Sobic003G157500 Sobic004G253800--Sobic003G157500 Sobic005G020200 Sobic005G020200 Sobic004G253800--Sobic005G020200 Sobic004G253800--Sobic001G188600 Sobic004G253800--Sobic006G025700 Sobic004G253800--Sobic009G059100 Sobic009G001500 Sobic009G001500 Sobic004G253800--Sobic009G001500 Sobic004G253800--Sobic001G357200 Sobic004G253800--Sobic006G114300 Sobic002G242600--Sobic004G044000 Sobic002G242600--Sobic007G013400 Sobic003G030900 Sobic003G030900 Sobic002G242600--Sobic003G030900 Sobic002G242600--Sobic003G383500 Sobic002G242600--Sobic009G001500 Sobic002G242600--Sobic002G190100 Sobic002G242600--Sobic001G027600 Sobic001G475600 Sobic001G475600 Sobic002G242600--Sobic001G475600 Sobic006G248200 Sobic006G248200 Sobic002G242600--Sobic006G248200
Octagon: transcription factors


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