Gene annotation
Transcriptome id Sobic.010G246700.1
Synonym Sb10g028580, XTR3, XTH25
Functional annotation glycosyl hydrolases family 16, putative, expressed
UniProt C5Z8T5
Pfam PF06955 PF00722
Panther DB PTHR31062 PTHR31062:SF20
NCBI CDD -
KEGG Orthology K14504; xyloglucan:xyloglucosyl transferase TCH4
Gene Ontology GO:0016762; xyloglucan:xyloglucosyl transferase activity GO:0006073cellular glucan metabolic process GO:0005618cell wall GO:0005975carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT5G57550 : xyloglucan endotransglucosylase/hydrolase 25
RAP-DB (Rice) LOC_Os06g48200.1 : glycosyl hydrolases family 16, putative, expressed
MaizeGDB (Corn) Zm00025a054957 , Zm00025a033566 , Zm00025a009913 , Zm00025a018310 , Zm00025a056955 , Zm00025a036323
Brachypodium KQK17338 , KQJ84411 , KQK17341 , KQJ95699
Barley HORVU0Hr1G022110.1 , HORVU6Hr1G081590.1 , HORVU6Hr1G081590.3 , HORVU6Hr1G081590.2 , HORVU6Hr1G081590.4 , HORVU7Hr1G098330.6 , HORVU7Hr1G098330.4 , HORVU7Hr1G098330.5 , HORVU7Hr1G098330.2 , HORVU7Hr1G098330.1 , HORVU2Hr1G101240.2 , HORVU2Hr1G101240.3 , HORVU2Hr1G101240.1 , HORVU7Hr1G098280.2 , HORVU7Hr1G098280.3 , HORVU7Hr1G098280.1 , HORVU7Hr1G098440.1 , HORVU7Hr1G098440.2 , HORVU7Hr1G098440.3 , HORVU7Hr1G098440.4 , HORVU7Hr1G098440.5 , HORVU7Hr1G098440.6 , HORVU2Hr1G101160.3 , HORVU2Hr1G101160.2 , HORVU2Hr1G101160.1 , HORVU2Hr1G101160.4 , HORVU7Hr1G098320.2 , HORVU7Hr1G098390.1 , HORVU7Hr1G098390.2 , HORVU7Hr1G098390.3 , HORVU7Hr1G098320.3 , HORVU7Hr1G098260.1 , HORVU7Hr1G098260.2 , HORVU7Hr1G098260.3 , HORVU4Hr1G085940.5 , HORVU4Hr1G085940.1 , HORVU4Hr1G085940.2
Wheat TraesCS6D02G318500 , TraesCS2B02G454600 , TraesCS2B02G454600 , TraesCS2A02G498200 , TraesCS7D02G418600 , TraesCS7D02G418600 , TraesCS7D02G418600 , TraesCS2A02G498400 , TraesCS7B02G326900 , TraesCS7B02G327200 , TraesCS7D02G419300 , TraesCS2D02G498400 , TraesCS2B02G526600 , TraesCS2B02G526500 , TraesCS7B02G327700 , TraesCS2B02G454800 , TraesCS7B02G327000 , TraesCS7A02G426900 , TraesCS2D02G431600 , TraesCS2B02G455400 , TraesCS2D02G498500 , TraesCS2D02G498600 , TraesCS2D02G431800 , TraesCS7A02G427600 , TraesCS7A02G426100 , TraesCS7D02G418700 , TraesCS7D02G419100 , TraesCS2A02G433800 , TraesCS7A02G427000 , TraesCS7B02G327500 , TraesCS7D02G419200 , TraesCS7D02G419600 , TraesCS2D02G432100 , TraesCS7A02G426600 , TraesCS7A02G426700 , TraesCS2A02G433600 , TraesCS2A02G498500 , TraesCS2D02G498700 , TraesCS7D02G419900 , TraesCS2A02G498300 , TraesCS2D02G498800 , TraesCS2A02G434300
Populus -


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cDNA sequences
Sobic.010G246700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G055900 fasciclin-like arabinogalactan protein 8 precursor, putative, expressed -
2 Sobic.008G171100 GDSL-like lipase/acylhydrolase, putative, expressed -
3 Sobic.006G219200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ATBAG1, putative, expressed -
4 Sobic.001G370000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@estradiol 17-beta-dehydrogenase 12, putative, expressed K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase
5 Sobic.002G201100 ZF-HD protein dimerisation region containing protein, expressed -
6 Sobic.002G142500 expressed protein -
7 Sobic.006G249100 expressed protein -
8 Sobic.010G037600 GDSL-like lipase/acylhydrolase, putative, expressed -
9 Sobic.009G216300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@polygalacturonase, putative, expressed -
10 Sobic.002G377300 CAMK_CAMK_like.35 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
11 Sobic.001G389600 expressed protein -
12 Sobic.001G099300 glycerol-3-phosphate acyltransferase, putative, expressed -
13 Sobic.003G420800 glycerol-3-phosphate dehydrogenase, putative, expressed K00006: glycerol-3-phosphate dehydrogenase (NAD+)
14 Sobic.008G066700 peroxidase precursor, putative, expressed K00430: peroxidase
15 Sobic.006G274866 - -
16 Sobic.001G047200 carboxyl-terminal peptidase, putative, expressed -
17 Sobic.001G298800 ternary complex factor MIP1, putative, expressed -
18 Sobic.005G141000 plant protein of unknown function domain containing protein, expressed -
19 Sobic.002G209800 ZOS9-11 - C2H2 zinc finger protein, expressed -
20 Sobic.010G165100 expressed protein -


Gene co-expression network
sample Sobic010G246700 Sobic010G246700 Sobic009G055900 Sobic009G055900 Sobic010G246700--Sobic009G055900 Sobic008G171100 Sobic008G171100 Sobic010G246700--Sobic008G171100 Sobic006G219200 Sobic006G219200 Sobic010G246700--Sobic006G219200 Sobic001G370000 Sobic001G370000 Sobic010G246700--Sobic001G370000 Sobic002G201100 Sobic002G201100 Sobic010G246700--Sobic002G201100 Sobic002G142500 Sobic002G142500 Sobic010G246700--Sobic002G142500 Sobic006G249100 Sobic006G249100 Sobic010G246700--Sobic006G249100 Sobic010G037600 Sobic010G037600 Sobic010G246700--Sobic010G037600 Sobic009G216300 Sobic009G216300 Sobic010G246700--Sobic009G216300 Sobic008G143600 Sobic008G143600 Sobic009G055900--Sobic008G143600 Sobic002G377300 Sobic002G377300 Sobic009G055900--Sobic002G377300 Sobic001G405000 Sobic001G405000 Sobic009G055900--Sobic001G405000 Sobic004G109000 Sobic004G109000 Sobic009G055900--Sobic004G109000 Sobic009G059100 Sobic009G059100 Sobic009G055900--Sobic009G059100 Sobic006G001400 Sobic006G001400 Sobic009G055900--Sobic006G001400 Sobic006G060500 Sobic006G060500 Sobic009G055900--Sobic006G060500 Sobic004G243400 Sobic004G243400 Sobic009G055900--Sobic004G243400 Sobic001G389600 Sobic001G389600 Sobic009G055900--Sobic001G389600 Sobic008G171100--Sobic006G060500 Sobic008G171100--Sobic010G246700 Sobic008G171100--Sobic006G249100 Sobic005G141000 Sobic005G141000 Sobic008G171100--Sobic005G141000 Sobic008G171100--Sobic009G055900 Sobic008G171100--Sobic010G037600 Sobic002G209800 Sobic002G209800 Sobic008G171100--Sobic002G209800 Sobic009G196200 Sobic009G196200 Sobic008G171100--Sobic009G196200 Sobic002G033000 Sobic002G033000 Sobic008G171100--Sobic002G033000 Sobic006G219200--Sobic001G389600 Sobic006G274866 Sobic006G274866 Sobic006G219200--Sobic006G274866 Sobic006G219200--Sobic010G246700 Sobic006G219200--Sobic002G142500 Sobic006G219200--Sobic009G055900 Sobic010G165100 Sobic010G165100 Sobic006G219200--Sobic010G165100 Sobic002G045200 Sobic002G045200 Sobic006G219200--Sobic002G045200 Sobic002G403000 Sobic002G403000 Sobic006G219200--Sobic002G403000 Sobic006G219200--Sobic002G377300 Sobic003G420800 Sobic003G420800 Sobic001G370000--Sobic003G420800 Sobic001G482300 Sobic001G482300 Sobic001G370000--Sobic001G482300 Sobic001G370000--Sobic010G246700 Sobic001G356400 Sobic001G356400 Sobic001G370000--Sobic001G356400 Sobic009G154100 Sobic009G154100 Sobic001G370000--Sobic009G154100 Sobic001G221900 Sobic001G221900 Sobic001G370000--Sobic001G221900 Sobic002G315000 Sobic002G315000 Sobic001G370000--Sobic002G315000 Sobic009G235700 Sobic009G235700 Sobic001G370000--Sobic009G235700 Sobic005G209900 Sobic005G209900 Sobic001G370000--Sobic005G209900 Sobic003G333000 Sobic003G333000 Sobic002G201100--Sobic003G333000 Sobic002G201100--Sobic009G196200 Sobic002G201100--Sobic006G001400 Sobic002G201100--Sobic009G055900 Sobic010G107200 Sobic010G107200 Sobic002G201100--Sobic010G107200 Sobic005G227050 Sobic005G227050 Sobic002G201100--Sobic005G227050 Sobic005G196500 Sobic005G196500 Sobic002G201100--Sobic005G196500 Sobic002G201100--Sobic009G154100 Sobic005G020200 Sobic005G020200 Sobic002G201100--Sobic005G020200 Sobic002G142500--Sobic006G274866 Sobic006G257200 Sobic006G257200 Sobic002G142500--Sobic006G257200 Sobic002G142500--Sobic001G389600 Sobic002G142500--Sobic010G165100 Sobic002G311000 Sobic002G311000 Sobic002G142500--Sobic002G311000 Sobic002G142500--Sobic009G235700 Sobic002G142500--Sobic002G045200 Sobic002G246000 Sobic002G246000 Sobic002G142500--Sobic002G246000 Sobic006G241800 Sobic006G241800 Sobic002G142500--Sobic006G241800 Sobic006G249100--Sobic008G171100 Sobic002G064400 Sobic002G064400 Sobic006G249100--Sobic002G064400 Sobic003G136400 Sobic003G136400 Sobic006G249100--Sobic003G136400 Sobic001G215300 Sobic001G215300 Sobic006G249100--Sobic001G215300 Sobic006G249100--Sobic004G109000 Sobic006G249100--Sobic009G055900 Sobic002G190100 Sobic002G190100 Sobic006G249100--Sobic002G190100 Sobic004G253800 Sobic004G253800 Sobic006G249100--Sobic004G253800 Sobic002G242600 Sobic002G242600 Sobic006G249100--Sobic002G242600 Sobic008G066700 Sobic008G066700 Sobic010G037600--Sobic008G066700 Sobic010G037600--Sobic002G033000 Sobic010G037600--Sobic008G171100 Sobic010G037600--Sobic009G055900 Sobic001G099300 Sobic001G099300 Sobic010G037600--Sobic001G099300 Sobic005G214600 Sobic005G214600 Sobic010G037600--Sobic005G214600 Sobic010G037600--Sobic010G246700 Sobic010G037600--Sobic002G377300 Sobic010G037600--Sobic003G136400 Sobic009G216300--Sobic002G142500 Sobic001G518000 Sobic001G518000 Sobic009G216300--Sobic001G518000 Sobic009G128800 Sobic009G128800 Sobic009G216300--Sobic009G128800 Sobic009G216300--Sobic009G235700 Sobic009G216300--Sobic010G165100 Sobic009G151100 Sobic009G151100 Sobic009G216300--Sobic009G151100 Sobic010G211800 Sobic010G211800 Sobic009G216300--Sobic010G211800 Sobic001G522300 Sobic001G522300 Sobic009G216300--Sobic001G522300 Sobic009G216300--Sobic002G045200
Octagon: transcription factors


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