Gene annotation
Transcriptome id Sobic.006G219200.1
Synonym Sb06g028870, BAG1, ATBAG1
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
ATBAG1, putative, expressed
UniProt C5YG51
Pfam PF00240 PF02179
Panther DB PTHR12329 PTHR12329:SF17
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G52060 : BCL-2-associated athanogene 1
RAP-DB (Rice) LOC_Os04g52890.1 : ATBAG1, putative, expressed
MaizeGDB (Corn) Zm00025a009737
Brachypodium KQJ84653 , KQJ84652
Barley HORVU2Hr1G103670.1 , HORVU2Hr1G103670.3 , HORVU2Hr1G103670.2 , HORVU2Hr1G103670.5 , HORVU2Hr1G103670.4 , HORVU2Hr1G103610.3 , HORVU2Hr1G103610.2 , HORVU2Hr1G103610.1
Wheat TraesCS2A02G463500 , TraesCS2D02G464700 , TraesCS2B02G485500
Populus -


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cDNA sequences
Sobic.006G219200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G389600 expressed protein -
2 Sobic.006G274866 - -
3 Sobic.010G246700 glycosyl hydrolases family 16, putative, expressed K14504: xyloglucan:xyloglucosyl transferase TCH4
4 Sobic.002G142500 expressed protein -
5 Sobic.009G055900 fasciclin-like arabinogalactan protein 8 precursor, putative, expressed -
6 Sobic.010G165100 expressed protein -
7 Sobic.002G045200 protein kinase, putative, expressed -
8 Sobic.002G403000 eukaryotic aspartyl protease domain containing protein, expressed -
9 Sobic.002G377300 CAMK_CAMK_like.35 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
10 Sobic.002G314800 monocopper oxidase, putative, expressed -
11 Sobic.009G216300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@polygalacturonase, putative, expressed -
12 Sobic.003G277200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@IQ calmodulin-binding motif family protein, putative, expressed -
13 Sobic.009G235700 transporter family protein, putative, expressed K08145: SLC2A8, MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 8
14 Sobic.001G534300 Trihelix Family(PubMedID : 24864043)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@AT-GTL1, putative, expressed -
15 Sobic.003G400600 BHLH transcription factor, putative, expressed -
16 Sobic.009G128800 expressed protein -
17 Sobic.003G360700 glycerol-3-phosphate acyltransferase, putative, expressed K13508: glycerol-3-phosphate acyltransferase
18 Sobic.010G228100 "DEP3(Ortholog in rice:Qiao et al., 2011)"(PubMedID : 31659937)@PLA IIIA/PLP7, putative, expressed -
19 Sobic.006G081000 protein kinase domain containing protein, expressed K04730: interleukin-1 receptor-associated kinase 1
20 Sobic.010G211800 TKL_IRAK_CrRLK1L-1.14 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -


Gene co-expression network
sample Sobic006G219200 Sobic006G219200 Sobic001G389600 Sobic001G389600 Sobic006G219200--Sobic001G389600 Sobic006G274866 Sobic006G274866 Sobic006G219200--Sobic006G274866 Sobic010G246700 Sobic010G246700 Sobic006G219200--Sobic010G246700 Sobic002G142500 Sobic002G142500 Sobic006G219200--Sobic002G142500 Sobic009G055900 Sobic009G055900 Sobic006G219200--Sobic009G055900 Sobic010G165100 Sobic010G165100 Sobic006G219200--Sobic010G165100 Sobic002G045200 Sobic002G045200 Sobic006G219200--Sobic002G045200 Sobic002G403000 Sobic002G403000 Sobic006G219200--Sobic002G403000 Sobic002G377300 Sobic002G377300 Sobic006G219200--Sobic002G377300 Sobic001G389600--Sobic002G403000 Sobic001G389600--Sobic010G165100 Sobic001G478100 Sobic001G478100 Sobic001G389600--Sobic001G478100 Sobic001G389600--Sobic002G045200 Sobic010G107200 Sobic010G107200 Sobic001G389600--Sobic010G107200 Sobic001G389600--Sobic002G142500 Sobic002G246000 Sobic002G246000 Sobic001G389600--Sobic002G246000 Sobic002G428000 Sobic002G428000 Sobic001G389600--Sobic002G428000 Sobic006G032800 Sobic006G032800 Sobic001G389600--Sobic006G032800 Sobic006G274866--Sobic002G142500 Sobic006G274866--Sobic010G165100 Sobic006G274866--Sobic001G389600 Sobic002G311000 Sobic002G311000 Sobic006G274866--Sobic002G311000 Sobic003G277200 Sobic003G277200 Sobic006G274866--Sobic003G277200 Sobic006G274866--Sobic002G045200 Sobic006G257200 Sobic006G257200 Sobic006G274866--Sobic006G257200 Sobic006G274866--Sobic002G246000 Sobic002G001100 Sobic002G001100 Sobic006G274866--Sobic002G001100 Sobic010G246700--Sobic009G055900 Sobic008G171100 Sobic008G171100 Sobic010G246700--Sobic008G171100 Sobic010G246700--Sobic006G219200 Sobic001G370000 Sobic001G370000 Sobic010G246700--Sobic001G370000 Sobic002G201100 Sobic002G201100 Sobic010G246700--Sobic002G201100 Sobic010G246700--Sobic002G142500 Sobic006G249100 Sobic006G249100 Sobic010G246700--Sobic006G249100 Sobic010G037600 Sobic010G037600 Sobic010G246700--Sobic010G037600 Sobic009G216300 Sobic009G216300 Sobic010G246700--Sobic009G216300 Sobic002G142500--Sobic006G274866 Sobic002G142500--Sobic006G257200 Sobic002G142500--Sobic001G389600 Sobic002G142500--Sobic010G165100 Sobic002G142500--Sobic002G311000 Sobic009G235700 Sobic009G235700 Sobic002G142500--Sobic009G235700 Sobic002G142500--Sobic002G045200 Sobic002G142500--Sobic002G246000 Sobic006G241800 Sobic006G241800 Sobic002G142500--Sobic006G241800 Sobic008G143600 Sobic008G143600 Sobic009G055900--Sobic008G143600 Sobic009G055900--Sobic002G377300 Sobic001G405000 Sobic001G405000 Sobic009G055900--Sobic001G405000 Sobic004G109000 Sobic004G109000 Sobic009G055900--Sobic004G109000 Sobic009G059100 Sobic009G059100 Sobic009G055900--Sobic009G059100 Sobic006G001400 Sobic006G001400 Sobic009G055900--Sobic006G001400 Sobic006G060500 Sobic006G060500 Sobic009G055900--Sobic006G060500 Sobic004G243400 Sobic004G243400 Sobic009G055900--Sobic004G243400 Sobic009G055900--Sobic001G389600 Sobic010G165100--Sobic002G246000 Sobic010G165100--Sobic001G389600 Sobic010G165100--Sobic002G142500 Sobic010G165100--Sobic002G045200 Sobic010G165100--Sobic006G274866 Sobic010G165100--Sobic002G403000 Sobic010G165100--Sobic006G032800 Sobic010G165100--Sobic002G311000 Sobic004G243800 Sobic004G243800 Sobic010G165100--Sobic004G243800 Sobic002G045200--Sobic001G389600 Sobic010G211800 Sobic010G211800 Sobic002G045200--Sobic010G211800 Sobic001G074100 Sobic001G074100 Sobic002G045200--Sobic001G074100 Sobic002G045200--Sobic010G165100 Sobic002G045200--Sobic006G241800 Sobic001G522300 Sobic001G522300 Sobic002G045200--Sobic001G522300 Sobic002G362700 Sobic002G362700 Sobic002G045200--Sobic002G362700 Sobic002G045200--Sobic002G311000 Sobic002G045200--Sobic002G142500 Sobic002G403000--Sobic001G389600 Sobic002G403000--Sobic001G478100 Sobic002G403000--Sobic002G428000 Sobic002G403000--Sobic010G165100 Sobic002G403000--Sobic002G045200 Sobic008G110400 Sobic008G110400 Sobic002G403000--Sobic008G110400 Sobic002G403000--Sobic002G246000 Sobic002G403000--Sobic003G277200 Sobic002G403000--Sobic010G107200 Sobic002G377300--Sobic009G055900 Sobic001G371700 Sobic001G371700 Sobic002G377300--Sobic001G371700 Sobic002G377300--Sobic010G165100 Sobic002G377300--Sobic002G142500 Sobic009G231100 Sobic009G231100 Sobic002G377300--Sobic009G231100 Sobic001G047200 Sobic001G047200 Sobic002G377300--Sobic001G047200 Sobic002G377300--Sobic008G143600 Sobic002G225000 Sobic002G225000 Sobic002G377300--Sobic002G225000 Sobic002G377300--Sobic002G246000
Octagon: transcription factors


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