Gene annotation
Transcriptome id Sobic.001G195800.1
Synonym 1, NLM8, Sb01g017230, NIP5, NLM6
Functional annotation aquaporin protein, putative, expressed
UniProt C5WW78
Pfam PF00230
Panther DB PTHR19139 PTHR19139:SF102
NCBI CDD KOG0223; Aquaporin (major intrinsic protein family)
KEGG Orthology K09874; aquaporin NIP
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0005215transporter activity


Orthologs (automatic annotation)
TAIR AT4G10380 : NOD26-like intrinsic protein 5;1
RAP-DB (Rice) LOC_Os10g36924.1 : aquaporin protein, putative, expressed
MaizeGDB (Corn) Zm00025a055227 , Zm00025a006327
Brachypodium KQJ97400
Barley HORVU3Hr1G014440.1 , HORVU3Hr1G014440.2 , HORVU3Hr1G014440.3 , HORVU1Hr1G047100.9 , HORVU1Hr1G047100.8 , HORVU1Hr1G047100.3 , HORVU1Hr1G047100.2 , HORVU1Hr1G047100.1 , HORVU1Hr1G047100.7 , HORVU1Hr1G047100.6 , HORVU1Hr1G047100.5 , HORVU1Hr1G047100.4 , HORVU1Hr1G047100.13 , HORVU1Hr1G047100.12 , HORVU1Hr1G047100.11 , HORVU1Hr1G047100.10 , HORVU1Hr1G047100.14 , HORVU3Hr1G014440.4
Wheat TraesCS1A02G177500 , TraesCS1B02G202700 , TraesCS1D02G176000
Populus -


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cDNA sequences
Sobic.001G195800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G155700 ABC transporter(PubMedID : 23463491)@white-brown complex homolog protein 11, putative, expressed -
2 Sobic.001G192100 "Belongs to the cytochrome P450 family, up-regulated under all the stress condition"(PubMedID : 24655390)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Belongs to the cytochrome P450 family(PubMedID : 24655390)@Up-reguralion under heat(PubMedID : 24916767)@cytochrome P450, putative, expressed -
3 Sobic.003G069200 transferase family protein, putative, expressed K13065: E2.3.1.133, shikimate O-hydroxycinnamoyltransferase
4 Sobic.008G139000 expressed protein -
5 Sobic.001G221300 alcohol oxidase, putative, expressed K17756: long-chain-alcohol oxidase
6 Sobic.001G363700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
7 Sobic.006G200800 phosphoribulokinase/Uridine kinase family protein, expressed K00855: PRK, phosphoribulokinase
8 Sobic.003G057900 ribosomal protein L5, putative, expressed -
9 Sobic.003G150600 pectinacetylesterase domain containing protein, expressed -
10 Sobic.008G048501 - -
11 Sobic.010G094301 - -
12 Sobic.010G006350 - -
13 Sobic.003G120500 transmembrane protein 136, putative, expressed -
14 Sobic.009G083300 white-brown complex homolog protein 12, putative, expressed -
15 Sobic.006G054300 amidohydrolase family protein, expressed -
16 Sobic.001G464700 - -
17 Sobic.004G036100 SAM dependent carboxyl methyltransferase, putative, expressed -
18 Sobic.002G299900 expressed protein -
19 Sobic.002G209800 ZOS9-11 - C2H2 zinc finger protein, expressed -
20 Sobic.003G069100 regulator of ribonuclease, putative, expressed -


Gene co-expression network
sample Sobic001G195800 Sobic001G195800 Sobic006G155700 Sobic006G155700 Sobic001G195800--Sobic006G155700 Sobic001G192100 Sobic001G192100 Sobic001G195800--Sobic001G192100 Sobic003G069200 Sobic003G069200 Sobic001G195800--Sobic003G069200 Sobic008G139000 Sobic008G139000 Sobic001G195800--Sobic008G139000 Sobic001G221300 Sobic001G221300 Sobic001G195800--Sobic001G221300 Sobic001G363700 Sobic001G363700 Sobic001G195800--Sobic001G363700 Sobic006G200800 Sobic006G200800 Sobic001G195800--Sobic006G200800 Sobic003G057900 Sobic003G057900 Sobic001G195800--Sobic003G057900 Sobic003G150600 Sobic003G150600 Sobic001G195800--Sobic003G150600 Sobic006G155700--Sobic003G069200 Sobic006G155700--Sobic001G221300 Sobic009G083300 Sobic009G083300 Sobic006G155700--Sobic009G083300 Sobic002G198600 Sobic002G198600 Sobic006G155700--Sobic002G198600 Sobic003G162900 Sobic003G162900 Sobic006G155700--Sobic003G162900 Sobic006G155700--Sobic003G150600 Sobic004G040600 Sobic004G040600 Sobic006G155700--Sobic004G040600 Sobic006G054300 Sobic006G054300 Sobic006G155700--Sobic006G054300 Sobic003G433900 Sobic003G433900 Sobic006G155700--Sobic003G433900 Sobic001G192100--Sobic003G057900 Sobic010G006350 Sobic010G006350 Sobic001G192100--Sobic010G006350 Sobic001G464700 Sobic001G464700 Sobic001G192100--Sobic001G464700 Sobic010G255600 Sobic010G255600 Sobic001G192100--Sobic010G255600 Sobic010G094301 Sobic010G094301 Sobic001G192100--Sobic010G094301 Sobic003G099400 Sobic003G099400 Sobic001G192100--Sobic003G099400 Sobic003G132100 Sobic003G132100 Sobic001G192100--Sobic003G132100 Sobic009G091850 Sobic009G091850 Sobic001G192100--Sobic009G091850 Sobic009G132900 Sobic009G132900 Sobic001G192100--Sobic009G132900 Sobic003G069200--Sobic001G221300 Sobic003G120500 Sobic003G120500 Sobic003G069200--Sobic003G120500 Sobic004G036100 Sobic004G036100 Sobic003G069200--Sobic004G036100 Sobic003G069200--Sobic006G155700 Sobic006G248200 Sobic006G248200 Sobic003G069200--Sobic006G248200 Sobic003G069200--Sobic003G150600 Sobic003G386300 Sobic003G386300 Sobic003G069200--Sobic003G386300 Sobic003G157400 Sobic003G157400 Sobic003G069200--Sobic003G157400 Sobic001G475600 Sobic001G475600 Sobic003G069200--Sobic001G475600 Sobic008G139000--Sobic001G195800 Sobic008G139000--Sobic006G155700 Sobic008G139000--Sobic009G083300 Sobic010G093500 Sobic010G093500 Sobic008G139000--Sobic010G093500 Sobic001G217200 Sobic001G217200 Sobic008G139000--Sobic001G217200 Sobic008G105850 Sobic008G105850 Sobic008G139000--Sobic008G105850 Sobic001G448700 Sobic001G448700 Sobic008G139000--Sobic001G448700 Sobic006G125800 Sobic006G125800 Sobic008G139000--Sobic006G125800 Sobic008G139000--Sobic006G054300 Sobic001G221300--Sobic003G069200 Sobic001G221300--Sobic003G150600 Sobic001G221300--Sobic003G433900 Sobic001G221300--Sobic002G198600 Sobic002G227700 Sobic002G227700 Sobic001G221300--Sobic002G227700 Sobic001G221300--Sobic003G386300 Sobic001G221300--Sobic006G248200 Sobic006G013800 Sobic006G013800 Sobic001G221300--Sobic006G013800 Sobic004G311100 Sobic004G311100 Sobic001G221300--Sobic004G311100 Sobic008G189500 Sobic008G189500 Sobic001G363700--Sobic008G189500 Sobic005G029400 Sobic005G029400 Sobic001G363700--Sobic005G029400 Sobic002G128600 Sobic002G128600 Sobic001G363700--Sobic002G128600 Sobic007G146350 Sobic007G146350 Sobic001G363700--Sobic007G146350 Sobic003G007800 Sobic003G007800 Sobic001G363700--Sobic003G007800 Sobic002G207900 Sobic002G207900 Sobic001G363700--Sobic002G207900 Sobic003G287000 Sobic003G287000 Sobic001G363700--Sobic003G287000 Sobic001G249500 Sobic001G249500 Sobic001G363700--Sobic001G249500 Sobic001G255300 Sobic001G255300 Sobic001G363700--Sobic001G255300 Sobic008G019100 Sobic008G019100 Sobic006G200800--Sobic008G019100 Sobic008G021300 Sobic008G021300 Sobic006G200800--Sobic008G021300 Sobic006G200800--Sobic006G054300 Sobic006G200800--Sobic001G192100 Sobic004G274100 Sobic004G274100 Sobic006G200800--Sobic004G274100 Sobic001G010100 Sobic001G010100 Sobic006G200800--Sobic001G010100 Sobic004G343900 Sobic004G343900 Sobic006G200800--Sobic004G343900 Sobic006G200800--Sobic003G132100 Sobic001G527000 Sobic001G527000 Sobic006G200800--Sobic001G527000 Sobic003G057900--Sobic001G192100 Sobic003G057900--Sobic010G006350 Sobic003G057900--Sobic009G132900 Sobic003G131000 Sobic003G131000 Sobic003G057900--Sobic003G131000 Sobic008G080400 Sobic008G080400 Sobic003G057900--Sobic008G080400 Sobic003G057900--Sobic010G094301 Sobic006G136500 Sobic006G136500 Sobic003G057900--Sobic006G136500 Sobic001G198800 Sobic001G198800 Sobic003G057900--Sobic001G198800 Sobic006G234100 Sobic006G234100 Sobic003G057900--Sobic006G234100 Sobic003G150600--Sobic001G221300 Sobic010G011800 Sobic010G011800 Sobic003G150600--Sobic010G011800 Sobic009G091800 Sobic009G091800 Sobic003G150600--Sobic009G091800 Sobic008G051000 Sobic008G051000 Sobic003G150600--Sobic008G051000 Sobic004G238500 Sobic004G238500 Sobic003G150600--Sobic004G238500 Sobic010G022100 Sobic010G022100 Sobic003G150600--Sobic010G022100 Sobic003G150600--Sobic003G433900 Sobic003G150600--Sobic003G069200 Sobic002G288300 Sobic002G288300 Sobic003G150600--Sobic002G288300
Octagon: transcription factors


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