Gene annotation
Transcriptome id Sobic.003G069100.1
Synonym
Functional annotation regulator of ribonuclease, putative, expressed
UniProt A0A1B6Q1Q7
Pfam PF03737
Panther DB PTHR33254 PTHR33254:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G16450 : Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase
RAP-DB (Rice) LOC_Os01g52460.1 : regulator of ribonuclease, putative, expressed
MaizeGDB (Corn) Zm00025a023434
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G171600 Ser/Thr protein phosphatase family protein, putative, expressed K01517: manganese-dependent ADP-ribose/CDP-alcohol diphosphatase
2 Sobic.008G067200 inhibitor I family protein, putative, expressed -
3 Sobic.010G276400 "Phytoene synthase, chloroplast precursor (Zm)"(PubMedID : 27208977)@"Phytoene synthase, chloroplast precursor (Zm)"(PubMedID : 27208977)@carotenoid biosynthesi(PubMedID : 18162592)@phytoene synthase, chloroplast precursor, putative, expressed K02291: 15-cis-phytoene synthase
4 Sobic.004G026300 heat shock protein 18.2(PubMedID : 26465154)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
5 Sobic.002G000500 isoflavone reductase, putative, expressed -
6 Sobic.010G019700 cytochrome P450 86A1, putative, expressed -
7 Sobic.001G068400 - -
8 Sobic.001G379700 uroporphyrinogen decarboxylase, putative, expressed K01599: hemE, uroporphyrinogen decarboxylase
9 Sobic.003G057900 ribosomal protein L5, putative, expressed -
10 Sobic.003G342300 dihydroflavonol-4-reductase, putative, expressed -
11 Sobic.008G030200 LTPL9 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
12 Sobic.004G023200 Polyketide cyclase/dehydrase and lipid transport superfamily protein(PubMedID : 26465154)@membrane related protein CP5, putative, expressed -
13 Sobic.003G199800 expressed protein -
14 Sobic.009G132900 PPDK(PubMedID : 19549309)@pyruvate orthophosphate dikinase(PubMedID : 26465154)@pyruvate orthophosphate dikinase(PubMedID : 26465154)@phyruvate phosphate dikinase(PubMedID : 26904072)@-(PubMedID : 26976818)@pyruvate, phosphate dikinase, chloroplast precursor, putative, expressed K01006: pyruvate, orthophosphate dikinase
15 Sobic.009G196800 cytochrome P450, putative, expressed -
16 Sobic.010G109500 expressed protein -
17 Sobic.008G081200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptide transporter PTR3-A, putative, expressed -
18 Sobic.003G131000 expressed protein -
19 Sobic.002G040100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- -
20 Sobic.001G192100 "Belongs to the cytochrome P450 family, up-regulated under all the stress condition"(PubMedID : 24655390)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Belongs to the cytochrome P450 family(PubMedID : 24655390)@Up-reguralion under heat(PubMedID : 24916767)@cytochrome P450, putative, expressed -


Gene co-expression network
sample Sobic003G069100 Sobic003G069100 Sobic007G171600 Sobic007G171600 Sobic003G069100--Sobic007G171600 Sobic008G067200 Sobic008G067200 Sobic003G069100--Sobic008G067200 Sobic010G276400 Sobic010G276400 Sobic003G069100--Sobic010G276400 Sobic004G026300 Sobic004G026300 Sobic003G069100--Sobic004G026300 Sobic002G000500 Sobic002G000500 Sobic003G069100--Sobic002G000500 Sobic010G019700 Sobic010G019700 Sobic003G069100--Sobic010G019700 Sobic001G068400 Sobic001G068400 Sobic003G069100--Sobic001G068400 Sobic001G379700 Sobic001G379700 Sobic003G069100--Sobic001G379700 Sobic003G057900 Sobic003G057900 Sobic003G069100--Sobic003G057900 Sobic007G171600--Sobic002G000500 Sobic007G171600--Sobic003G069100 Sobic010G109500 Sobic010G109500 Sobic007G171600--Sobic010G109500 Sobic007G171600--Sobic010G276400 Sobic003G199800 Sobic003G199800 Sobic007G171600--Sobic003G199800 Sobic004G023200 Sobic004G023200 Sobic007G171600--Sobic004G023200 Sobic002G040100 Sobic002G040100 Sobic007G171600--Sobic002G040100 Sobic001G338700 Sobic001G338700 Sobic007G171600--Sobic001G338700 Sobic006G234100 Sobic006G234100 Sobic007G171600--Sobic006G234100 Sobic008G080400 Sobic008G080400 Sobic008G067200--Sobic008G080400 Sobic008G067200--Sobic003G069100 Sobic008G067200--Sobic004G026300 Sobic003G131000 Sobic003G131000 Sobic008G067200--Sobic003G131000 Sobic004G182700 Sobic004G182700 Sobic008G067200--Sobic004G182700 Sobic008G067200--Sobic010G019700 Sobic003G342300 Sobic003G342300 Sobic008G067200--Sobic003G342300 Sobic008G030200 Sobic008G030200 Sobic008G067200--Sobic008G030200 Sobic008G081200 Sobic008G081200 Sobic008G067200--Sobic008G081200 Sobic010G276400--Sobic010G109500 Sobic010G276400--Sobic003G199800 Sobic010G276400--Sobic002G000500 Sobic010G276400--Sobic002G040100 Sobic010G276400--Sobic006G234100 Sobic010G276400--Sobic001G068400 Sobic008G038300 Sobic008G038300 Sobic010G276400--Sobic008G038300 Sobic010G276400--Sobic007G171600 Sobic003G209800 Sobic003G209800 Sobic010G276400--Sobic003G209800 Sobic004G026300--Sobic003G131000 Sobic004G026300--Sobic010G276400 Sobic004G026300--Sobic003G199800 Sobic003G234400 Sobic003G234400 Sobic004G026300--Sobic003G234400 Sobic010G038500 Sobic010G038500 Sobic004G026300--Sobic010G038500 Sobic001G111700 Sobic001G111700 Sobic004G026300--Sobic001G111700 Sobic004G026300--Sobic001G068400 Sobic004G026300--Sobic002G040100 Sobic004G026300--Sobic003G069100 Sobic002G000500--Sobic002G040100 Sobic006G011100 Sobic006G011100 Sobic002G000500--Sobic006G011100 Sobic002G000500--Sobic010G109500 Sobic002G000500--Sobic010G276400 Sobic002G000500--Sobic003G199800 Sobic002G000500--Sobic008G038300 Sobic002G000500--Sobic007G171600 Sobic002G000500--Sobic003G209800 Sobic001G274600 Sobic001G274600 Sobic002G000500--Sobic001G274600 Sobic009G196800 Sobic009G196800 Sobic010G019700--Sobic009G196800 Sobic010G019700--Sobic004G023200 Sobic010G019700--Sobic004G026300 Sobic010G019700--Sobic003G069100 Sobic002G098800 Sobic002G098800 Sobic010G019700--Sobic002G098800 Sobic010G019700--Sobic007G171600 Sobic010G019700--Sobic003G199800 Sobic001G069000 Sobic001G069000 Sobic010G019700--Sobic001G069000 Sobic002G180400 Sobic002G180400 Sobic010G019700--Sobic002G180400 Sobic001G068400--Sobic002G040100 Sobic001G068400--Sobic010G038500 Sobic010G183100 Sobic010G183100 Sobic001G068400--Sobic010G183100 Sobic004G035700 Sobic004G035700 Sobic001G068400--Sobic004G035700 Sobic001G068400--Sobic008G081200 Sobic001G068400--Sobic010G276400 Sobic001G068400--Sobic002G000500 Sobic001G068400--Sobic003G199800 Sobic010G183032 Sobic010G183032 Sobic001G068400--Sobic010G183032 Sobic001G448400 Sobic001G448400 Sobic001G379700--Sobic001G448400 Sobic003G132100 Sobic003G132100 Sobic001G379700--Sobic003G132100 Sobic003G197400 Sobic003G197400 Sobic001G379700--Sobic003G197400 Sobic001G379700--Sobic004G023200 Sobic002G033800 Sobic002G033800 Sobic001G379700--Sobic002G033800 Sobic001G379700--Sobic002G180400 Sobic001G527000 Sobic001G527000 Sobic001G379700--Sobic001G527000 Sobic004G343300 Sobic004G343300 Sobic001G379700--Sobic004G343300 Sobic009G091850 Sobic009G091850 Sobic001G379700--Sobic009G091850 Sobic001G192100 Sobic001G192100 Sobic003G057900--Sobic001G192100 Sobic010G006350 Sobic010G006350 Sobic003G057900--Sobic010G006350 Sobic009G132900 Sobic009G132900 Sobic003G057900--Sobic009G132900 Sobic003G057900--Sobic003G131000 Sobic003G057900--Sobic008G080400 Sobic010G094301 Sobic010G094301 Sobic003G057900--Sobic010G094301 Sobic006G136500 Sobic006G136500 Sobic003G057900--Sobic006G136500 Sobic001G198800 Sobic001G198800 Sobic003G057900--Sobic001G198800 Sobic003G057900--Sobic006G234100
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.