Gene annotation
Transcriptome id Sobic.008G139000.1
Synonym Sb08g018990
Functional annotation expressed protein
UniProt C5YQB1
Pfam -
Panther DB PTHR33115 PTHR33115:SF9
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G18980 : ARM repeat superfamily protein
RAP-DB (Rice) LOC_Os12g18729.2 : expressed protein
MaizeGDB (Corn) Zm00025a004274
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.008G139000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G195800 aquaporin protein, putative, expressed K09874: aquaporin NIP
2 Sobic.006G155700 ABC transporter(PubMedID : 23463491)@white-brown complex homolog protein 11, putative, expressed -
3 Sobic.009G083300 white-brown complex homolog protein 12, putative, expressed -
4 Sobic.010G093500 CSLA3 - cellulose synthase-like family A@ mannan synthase, expressed K13680: beta-mannan synthase
5 Sobic.001G217200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Class III HD ZIP family protein(PubMedID : 23915383)@START domain containing protein, expressed K09338: homeobox-leucine zipper protein
6 Sobic.008G105850 - -
7 Sobic.001G448700 "TUD1(Ortholog in rice:Hu et al., 2013)"(PubMedID : 31659845)@U-box domain containing protein, expressed -
8 Sobic.006G125800 oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase
9 Sobic.006G054300 amidohydrolase family protein, expressed -
10 Sobic.005G227000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aspartic protease, putative, expressed -
11 Sobic.002G246000 expressed protein -
12 Sobic.003G210900 protein kinase, putative, expressed -
13 Sobic.003G069200 transferase family protein, putative, expressed K13065: E2.3.1.133, shikimate O-hydroxycinnamoyltransferase
14 Sobic.005G192300 stripe rust resistance protein Yr10, putative, expressed -
15 Sobic.006G127350 - -
16 Sobic.001G482300 3-ketoacyl-CoA synthase 10, putative, expressed K15397: 3-ketoacyl-CoA synthase
17 Sobic.008G105300 expressed protein -
18 Sobic.008G048501 - -
19 Sobic.003G071600 3-oxo-5-alpha-steroid 4-dehydrogenase, putative, expressed K10258: TER, TSC13, very-long-chain enoyl-CoA reductase
20 Sobic.004G040600 pyridoxamine 5\'-phosphate oxidase family protein, putative, expressed -


Gene co-expression network
sample Sobic008G139000 Sobic008G139000 Sobic001G195800 Sobic001G195800 Sobic008G139000--Sobic001G195800 Sobic006G155700 Sobic006G155700 Sobic008G139000--Sobic006G155700 Sobic009G083300 Sobic009G083300 Sobic008G139000--Sobic009G083300 Sobic010G093500 Sobic010G093500 Sobic008G139000--Sobic010G093500 Sobic001G217200 Sobic001G217200 Sobic008G139000--Sobic001G217200 Sobic008G105850 Sobic008G105850 Sobic008G139000--Sobic008G105850 Sobic001G448700 Sobic001G448700 Sobic008G139000--Sobic001G448700 Sobic006G125800 Sobic006G125800 Sobic008G139000--Sobic006G125800 Sobic006G054300 Sobic006G054300 Sobic008G139000--Sobic006G054300 Sobic001G195800--Sobic006G155700 Sobic001G192100 Sobic001G192100 Sobic001G195800--Sobic001G192100 Sobic003G069200 Sobic003G069200 Sobic001G195800--Sobic003G069200 Sobic001G195800--Sobic008G139000 Sobic001G221300 Sobic001G221300 Sobic001G195800--Sobic001G221300 Sobic001G363700 Sobic001G363700 Sobic001G195800--Sobic001G363700 Sobic006G200800 Sobic006G200800 Sobic001G195800--Sobic006G200800 Sobic003G057900 Sobic003G057900 Sobic001G195800--Sobic003G057900 Sobic003G150600 Sobic003G150600 Sobic001G195800--Sobic003G150600 Sobic006G155700--Sobic003G069200 Sobic006G155700--Sobic001G221300 Sobic006G155700--Sobic009G083300 Sobic002G198600 Sobic002G198600 Sobic006G155700--Sobic002G198600 Sobic003G162900 Sobic003G162900 Sobic006G155700--Sobic003G162900 Sobic006G155700--Sobic003G150600 Sobic004G040600 Sobic004G040600 Sobic006G155700--Sobic004G040600 Sobic006G155700--Sobic006G054300 Sobic003G433900 Sobic003G433900 Sobic006G155700--Sobic003G433900 Sobic009G083300--Sobic003G069200 Sobic008G008500 Sobic008G008500 Sobic009G083300--Sobic008G008500 Sobic009G083300--Sobic006G155700 Sobic004G015700 Sobic004G015700 Sobic009G083300--Sobic004G015700 Sobic002G064400 Sobic002G064400 Sobic009G083300--Sobic002G064400 Sobic005G084000 Sobic005G084000 Sobic009G083300--Sobic005G084000 Sobic003G071600 Sobic003G071600 Sobic009G083300--Sobic003G071600 Sobic001G142400 Sobic001G142400 Sobic009G083300--Sobic001G142400 Sobic001G099000 Sobic001G099000 Sobic009G083300--Sobic001G099000 Sobic006G127350 Sobic006G127350 Sobic010G093500--Sobic006G127350 Sobic010G030800 Sobic010G030800 Sobic010G093500--Sobic010G030800 Sobic004G095000 Sobic004G095000 Sobic010G093500--Sobic004G095000 Sobic003G069100 Sobic003G069100 Sobic010G093500--Sobic003G069100 Sobic008G067200 Sobic008G067200 Sobic010G093500--Sobic008G067200 Sobic001G300800 Sobic001G300800 Sobic010G093500--Sobic001G300800 Sobic005G202600 Sobic005G202600 Sobic010G093500--Sobic005G202600 Sobic010G093500--Sobic008G105850 Sobic003G131000 Sobic003G131000 Sobic010G093500--Sobic003G131000 Sobic006G063001 Sobic006G063001 Sobic001G217200--Sobic006G063001 Sobic001G371700 Sobic001G371700 Sobic001G217200--Sobic001G371700 Sobic007G203000 Sobic007G203000 Sobic001G217200--Sobic007G203000 Sobic002G377300 Sobic002G377300 Sobic001G217200--Sobic002G377300 Sobic004G178400 Sobic004G178400 Sobic001G217200--Sobic004G178400 Sobic001G217200--Sobic009G083300 Sobic004G255800 Sobic004G255800 Sobic001G217200--Sobic004G255800 Sobic002G272400 Sobic002G272400 Sobic001G217200--Sobic002G272400 Sobic001G217200--Sobic003G071600 Sobic008G105850--Sobic006G127350 Sobic008G105300 Sobic008G105300 Sobic008G105850--Sobic008G105300 Sobic001G361700 Sobic001G361700 Sobic008G105850--Sobic001G361700 Sobic003G404900 Sobic003G404900 Sobic008G105850--Sobic003G404900 Sobic008G105850--Sobic010G093500 Sobic008G105850--Sobic003G069100 Sobic007G171600 Sobic007G171600 Sobic008G105850--Sobic007G171600 Sobic006G011100 Sobic006G011100 Sobic008G105850--Sobic006G011100 Sobic002G000500 Sobic002G000500 Sobic008G105850--Sobic002G000500 Sobic006G047300 Sobic006G047300 Sobic001G448700--Sobic006G047300 Sobic001G161400 Sobic001G161400 Sobic001G448700--Sobic001G161400 Sobic001G202500 Sobic001G202500 Sobic001G448700--Sobic001G202500 Sobic004G301200 Sobic004G301200 Sobic001G448700--Sobic004G301200 Sobic003G209300 Sobic003G209300 Sobic001G448700--Sobic003G209300 Sobic009G105200 Sobic009G105200 Sobic001G448700--Sobic009G105200 Sobic003G210900 Sobic003G210900 Sobic001G448700--Sobic003G210900 Sobic009G004800 Sobic009G004800 Sobic001G448700--Sobic009G004800 Sobic006G223300 Sobic006G223300 Sobic001G448700--Sobic006G223300 Sobic009G235700 Sobic009G235700 Sobic006G125800--Sobic009G235700 Sobic003G339600 Sobic003G339600 Sobic006G125800--Sobic003G339600 Sobic010G020600 Sobic010G020600 Sobic006G125800--Sobic010G020600 Sobic002G382500 Sobic002G382500 Sobic006G125800--Sobic002G382500 Sobic001G221900 Sobic001G221900 Sobic006G125800--Sobic001G221900 Sobic004G283800 Sobic004G283800 Sobic006G125800--Sobic004G283800 Sobic010G107200 Sobic010G107200 Sobic006G125800--Sobic010G107200 Sobic002G419200 Sobic002G419200 Sobic006G125800--Sobic002G419200 Sobic003G360700 Sobic003G360700 Sobic006G125800--Sobic003G360700 Sobic005G116100 Sobic005G116100 Sobic006G054300--Sobic005G116100 Sobic008G078400 Sobic008G078400 Sobic006G054300--Sobic008G078400 Sobic009G030900 Sobic009G030900 Sobic006G054300--Sobic009G030900 Sobic004G343900 Sobic004G343900 Sobic006G054300--Sobic004G343900 Sobic007G143700 Sobic007G143700 Sobic006G054300--Sobic007G143700 Sobic002G274200 Sobic002G274200 Sobic006G054300--Sobic002G274200 Sobic001G104800 Sobic001G104800 Sobic006G054300--Sobic001G104800 Sobic005G123200 Sobic005G123200 Sobic006G054300--Sobic005G123200 Sobic003G157400 Sobic003G157400 Sobic006G054300--Sobic003G157400
Octagon: transcription factors


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