Gene annotation
Transcriptome id Sobic.010G093500.3,Sobic.010G093500.2
Synonym CSLA09, RAT4, ATCSLA9, CSLA9, ATCSLA09
Functional annotation CSLA3 - cellulose synthase-like family A
mannan synthase, expressed
UniProt A0A1W0VS92 , A0A1W0VS53
Pfam PF13632
Panther DB PTHR32044
NCBI CDD -
KEGG Orthology K13680; beta-mannan synthase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G03760 : Nucleotide-diphospho-sugar transferases superfamily protein
RAP-DB (Rice) LOC_Os06g12460.1 : CSLA3 - cellulose synthase-like family A; mannan synthase, expressed
MaizeGDB (Corn) Zm00025a042605 , Zm00025a031154 , Zm00025a006992 , Zm00025a005925
Brachypodium KQK18855 , KQK18854
Barley HORVU7Hr1G038440.8 , HORVU7Hr1G038440.9 , HORVU7Hr1G038440.2 , HORVU7Hr1G038440.3 , HORVU7Hr1G038440.1 , HORVU7Hr1G038440.6 , HORVU7Hr1G038440.7 , HORVU7Hr1G038440.4 , HORVU7Hr1G038440.5 , HORVU3Hr1G109930.20 , HORVU3Hr1G109930.21 , HORVU3Hr1G109930.18 , HORVU3Hr1G109930.14 , HORVU3Hr1G109930.10 , HORVU3Hr1G109930.12 , HORVU7Hr1G038440.18 , HORVU7Hr1G038440.19 , HORVU7Hr1G038440.10 , HORVU7Hr1G038440.11 , HORVU7Hr1G038440.12 , HORVU7Hr1G038440.13 , HORVU7Hr1G038440.14 , HORVU7Hr1G038440.15 , HORVU7Hr1G038440.16 , HORVU7Hr1G038440.17 , HORVU7Hr1G038440.24 , HORVU7Hr1G038440.21 , HORVU7Hr1G038440.20 , HORVU7Hr1G038440.23 , HORVU7Hr1G038440.22 , HORVU3Hr1G109930.4 , HORVU3Hr1G109930.6
Wheat TraesCS7A02G189100 , TraesCS7A02G189100 , TraesCS3B02G558400 , TraesCS7D02G190000 , TraesCS3D02G504200 , TraesCS7B02G093900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G127350 - -
2 Sobic.010G030800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@zinc finger family protein, putative, expressed -
3 Sobic.004G095000 zinc knuckle family protein, expressed K03257: translation initiation factor 4A
4 Sobic.003G069100 regulator of ribonuclease, putative, expressed -
5 Sobic.008G067200 inhibitor I family protein, putative, expressed -
6 Sobic.001G300800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expansin precursor, putative, expressed -
7 Sobic.005G202600 tropinone reductase 2, putative, expressed -
8 Sobic.008G105850 - -
9 Sobic.003G131000 expressed protein -
10 Sobic.004G166000 bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed K01674: carbonic anhydrase
11 Sobic.005G123200 cbbY, putative, expressed -
12 Sobic.002G329400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@beta-amylase, putative, expressed -
13 Sobic.003G234400 CA(PubMedID : 19549309)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@carbonic anhydrase(PubMedID : 26904072)@-(PubMedID : 26976818)@carbonic anhydrase, chloroplast precursor, putative, expressed K01673: cynT, carbonic anhydrase
14 Sobic.006G200800 phosphoribulokinase/Uridine kinase family protein, expressed K00855: PRK, phosphoribulokinase
15 Sobic.008G081200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptide transporter PTR3-A, putative, expressed -
16 Sobic.008G080400 "cyanogenic beta-glucosidase dhurrinase, up-regulated under drought stress "(PubMedID : 24655390)@Os6bglu24 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed K01188: beta-glucosidase
17 Sobic.004G026300 heat shock protein 18.2(PubMedID : 26465154)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
18 Sobic.001G171900 Glycerophosphoryl diester phosphodiesterase precursor (Os)(PubMedID : 27208977)@glycerophosphoryl diester phosphodiesterase family protein, putative, expressed K01126: E3.1.4.46, glpQ, glycerophosphoryl diester phosphodiesterase
19 Sobic.003G036100 - -
20 Sobic.006G134400 protein FAM133, putative, expressed -


Gene co-expression network
sample Sobic010G093500 Sobic010G093500 Sobic006G127350 Sobic006G127350 Sobic010G093500--Sobic006G127350 Sobic010G030800 Sobic010G030800 Sobic010G093500--Sobic010G030800 Sobic004G095000 Sobic004G095000 Sobic010G093500--Sobic004G095000 Sobic003G069100 Sobic003G069100 Sobic010G093500--Sobic003G069100 Sobic008G067200 Sobic008G067200 Sobic010G093500--Sobic008G067200 Sobic001G300800 Sobic001G300800 Sobic010G093500--Sobic001G300800 Sobic005G202600 Sobic005G202600 Sobic010G093500--Sobic005G202600 Sobic008G105850 Sobic008G105850 Sobic010G093500--Sobic008G105850 Sobic003G131000 Sobic003G131000 Sobic010G093500--Sobic003G131000 Sobic001G171900 Sobic001G171900 Sobic006G127350--Sobic001G171900 Sobic006G127350--Sobic008G105850 Sobic006G127350--Sobic010G093500 Sobic010G094301 Sobic010G094301 Sobic006G127350--Sobic010G094301 Sobic010G109500 Sobic010G109500 Sobic006G127350--Sobic010G109500 Sobic006G234100 Sobic006G234100 Sobic006G127350--Sobic006G234100 Sobic002G000500 Sobic002G000500 Sobic006G127350--Sobic002G000500 Sobic005G123200 Sobic005G123200 Sobic006G127350--Sobic005G123200 Sobic006G222700 Sobic006G222700 Sobic006G127350--Sobic006G222700 Sobic007G189700 Sobic007G189700 Sobic010G030800--Sobic007G189700 Sobic009G222200 Sobic009G222200 Sobic010G030800--Sobic009G222200 Sobic010G183100 Sobic010G183100 Sobic010G030800--Sobic010G183100 Sobic010G030800--Sobic005G202600 Sobic003G235500 Sobic003G235500 Sobic010G030800--Sobic003G235500 Sobic004G353700 Sobic004G353700 Sobic010G030800--Sobic004G353700 Sobic003G036100 Sobic003G036100 Sobic010G030800--Sobic003G036100 Sobic001G189100 Sobic001G189100 Sobic010G030800--Sobic001G189100 Sobic004G166000 Sobic004G166000 Sobic004G095000--Sobic004G166000 Sobic004G095000--Sobic001G189100 Sobic003G237600 Sobic003G237600 Sobic004G095000--Sobic003G237600 Sobic009G254600 Sobic009G254600 Sobic004G095000--Sobic009G254600 Sobic004G095000--Sobic003G036100 Sobic001G355600 Sobic001G355600 Sobic004G095000--Sobic001G355600 Sobic004G095000--Sobic009G222200 Sobic004G095000--Sobic010G030800 Sobic007G171600 Sobic007G171600 Sobic003G069100--Sobic007G171600 Sobic003G069100--Sobic008G067200 Sobic010G276400 Sobic010G276400 Sobic003G069100--Sobic010G276400 Sobic004G026300 Sobic004G026300 Sobic003G069100--Sobic004G026300 Sobic003G069100--Sobic002G000500 Sobic010G019700 Sobic010G019700 Sobic003G069100--Sobic010G019700 Sobic001G068400 Sobic001G068400 Sobic003G069100--Sobic001G068400 Sobic001G379700 Sobic001G379700 Sobic003G069100--Sobic001G379700 Sobic003G057900 Sobic003G057900 Sobic003G069100--Sobic003G057900 Sobic008G080400 Sobic008G080400 Sobic008G067200--Sobic008G080400 Sobic008G067200--Sobic003G069100 Sobic008G067200--Sobic004G026300 Sobic008G067200--Sobic003G131000 Sobic004G182700 Sobic004G182700 Sobic008G067200--Sobic004G182700 Sobic008G067200--Sobic010G019700 Sobic003G342300 Sobic003G342300 Sobic008G067200--Sobic003G342300 Sobic008G030200 Sobic008G030200 Sobic008G067200--Sobic008G030200 Sobic008G081200 Sobic008G081200 Sobic008G067200--Sobic008G081200 Sobic001G300800--Sobic004G095000 Sobic001G300800--Sobic010G093500 Sobic003G338801 Sobic003G338801 Sobic001G300800--Sobic003G338801 Sobic001G300800--Sobic010G094301 Sobic001G300800--Sobic003G069100 Sobic001G301600 Sobic001G301600 Sobic001G300800--Sobic001G301600 Sobic001G361700 Sobic001G361700 Sobic001G300800--Sobic001G361700 Sobic001G262301 Sobic001G262301 Sobic001G300800--Sobic001G262301 Sobic002G213000 Sobic002G213000 Sobic001G300800--Sobic002G213000 Sobic005G202600--Sobic010G030800 Sobic005G202600--Sobic003G036100 Sobic005G202600--Sobic007G189700 Sobic005G202600--Sobic004G353700 Sobic001G111700 Sobic001G111700 Sobic005G202600--Sobic001G111700 Sobic002G329400 Sobic002G329400 Sobic005G202600--Sobic002G329400 Sobic005G202600--Sobic009G222200 Sobic005G202600--Sobic001G189100 Sobic008G105850--Sobic006G127350 Sobic008G105300 Sobic008G105300 Sobic008G105850--Sobic008G105300 Sobic008G105850--Sobic001G361700 Sobic003G404900 Sobic003G404900 Sobic008G105850--Sobic003G404900 Sobic008G105850--Sobic010G093500 Sobic008G105850--Sobic003G069100 Sobic008G105850--Sobic007G171600 Sobic006G011100 Sobic006G011100 Sobic008G105850--Sobic006G011100 Sobic008G105850--Sobic002G000500 Sobic003G131000--Sobic004G026300 Sobic001G198800 Sobic001G198800 Sobic003G131000--Sobic001G198800 Sobic003G131000--Sobic010G276400 Sobic010G038500 Sobic010G038500 Sobic003G131000--Sobic010G038500 Sobic002G040100 Sobic002G040100 Sobic003G131000--Sobic002G040100 Sobic003G131000--Sobic010G109500 Sobic003G131000--Sobic003G057900 Sobic003G199800 Sobic003G199800 Sobic003G131000--Sobic003G199800 Sobic003G131000--Sobic001G068400
Octagon: transcription factors


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