Gene annotation
| Transcriptome id | Sobic.005G192300.1 |
|---|---|
| Synonym | Sb05g024900 |
| Functional annotation | stripe rust resistance protein Yr10, putative, expressed |
| UniProt | A0A1Z5RK82 |
| Pfam | PF00931 |
| Panther DB | PTHR23155 PTHR23155:SF484 |
| NCBI CDD | KOG4658; Apoptotic ATPase |
| KEGG Orthology | - |
| Gene Ontology | - |
Orthologs (automatic annotation)
| TAIR | AT1G50180 : NB-ARC domain-containing disease resistance protein |
|---|---|
| RAP-DB (Rice) | LOC_Os02g18510.1 : stripe rust resistance protein Yr10, putative, expressed |
| MaizeGDB (Corn) | Zm00025a006197 |
| Brachypodium | - |
| Barley | HORVU1Hr1G004080.28 , HORVU1Hr1G004080.29 , HORVU1Hr1G004080.22 , HORVU1Hr1G004080.23 , HORVU1Hr1G004080.20 , HORVU1Hr1G004080.21 , HORVU1Hr1G004080.26 , HORVU1Hr1G004080.27 , HORVU1Hr1G004080.24 , HORVU1Hr1G004080.25 , HORVU1Hr1G004080.3 , HORVU1Hr1G004080.2 , HORVU1Hr1G004080.1 , HORVU1Hr1G004080.7 , HORVU1Hr1G004080.6 , HORVU1Hr1G004080.4 , HORVU1Hr1G004080.9 , HORVU1Hr1G004080.8 , HORVU1Hr1G004080.5 , HORVU1Hr1G004080.13 , HORVU1Hr1G004080.12 , HORVU1Hr1G004080.11 , HORVU1Hr1G004080.10 , HORVU1Hr1G004080.17 , HORVU1Hr1G004080.16 , HORVU1Hr1G004080.15 , HORVU1Hr1G004080.14 , HORVU1Hr1G004080.19 , HORVU1Hr1G004080.18 |
| Wheat | TraesCS7B02G009100 , TraesCS7A02G064000 , TraesCS7A02G110700 , TraesCS7A02G110700 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.004G301200 | kinesin motor domain containing protein, expressed | K11498: centromeric protein E |
| 2 | Sobic.006G047300 | Minichromosome maintenance (MCM2/3/5) family protein("PubMedID : 26759170,PubMedID : 24597475")@EMB1688, putative, expressed | K06949: rsgA, ribosome biogenesis GTPase / thiamine phosphate phosphatase |
| 3 | Sobic.007G083100 | - | - |
| 4 | Sobic.007G112700 | - | - |
| 5 | Sobic.001G448700 | "TUD1(Ortholog in rice:Hu et al., 2013)"(PubMedID : 31659845)@U-box domain containing protein, expressed | - |
| 6 | Sobic.009G013300 | rp3 protein, putative, expressed | - |
| 7 | Sobic.003G267500 | expressed protein | - |
| 8 | Sobic.009G005400 | ABC transporter, ATP-binding protein, putative, expressed | - |
| 9 | Sobic.004G144400 | riboflavin biosynthesis protein ribD, putative, expressed | K11752: diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase |
| 10 | Sobic.004G040600 | pyridoxamine 5\'-phosphate oxidase family protein, putative, expressed | - |
| 11 | Sobic.002G217600 | E2F-related protein, putative, expressed | - |
| 12 | Sobic.002G109000 | tetratricopeptide repeat containing protein, putative, expressed | - |
| 13 | Sobic.003G210900 | protein kinase, putative, expressed | - |
| 14 | Sobic.003G275000 | Cellular calcium signals(PubMedID : 19860013)@calcineurin B, putative, expressed | K06268: PPP3R, serine/threonine-protein phosphatase 2B regulatory subunit |
| 15 | Sobic.010G204900 | formamidopyrimidine-DNA glycosylase, putative, expressed | K10563: mutM, formamidopyrimidine-DNA glycosylase |
| 16 | Sobic.003G209300 | - | - |
| 17 | Sobic.001G036800 | AP2 domain containing protein, expressed | K09284: AP2-like factor, euAP2 lineage |
| 18 | Sobic.004G015700 | serine/threonine-protein kinase receptor precursor, putative, expressed | - |
| 19 | Sobic.002G141900 | -(PubMedID : 26976818)@Citrate transporter protein, putative, expressed | - |
| 20 | Sobic.001G424300 | oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed | K08081: tropinone reductase I |
Gene co-expression network
Octagon: transcription factors
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