Gene annotation
Transcriptome id Sobic.002G217600.1
Synonym Sb02g025950
Functional annotation E2F-related protein, putative, expressed
UniProt A0A1B6QCS4
Pfam -
Panther DB PTHR34370 PTHR34370:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G38695 : -
RAP-DB (Rice) LOC_Os09g27070.1 : E2F-related protein, putative, expressed
MaizeGDB (Corn) Zm00025a047175
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G117300 ABC transporter, ATP-binding protein, putative, expressed -
2 Sobic.006G091300 glutathione S-transferase, N-terminal domain containing protein, expressed K03354: anaphase-promoting complex subunit 7
3 Sobic.004G301200 kinesin motor domain containing protein, expressed K11498: centromeric protein E
4 Sobic.002G304100 tRNA synthetases class II domain containing protein, expressed K01893: NARS, asparaginyl-tRNA synthetase
5 Sobic.010G204900 formamidopyrimidine-DNA glycosylase, putative, expressed K10563: mutM, formamidopyrimidine-DNA glycosylase
6 Sobic.010G202300 GDSL-like lipase/acylhydrolase, putative, expressed -
7 Sobic.003G267500 expressed protein -
8 Sobic.003G162900 expressed protein -
9 Sobic.003G265500 peptidyl-tRNA hydrolase, mitochondrial precursor protein, putative, expressed K01056: PTH1, pth, peptidyl-tRNA hydrolase, PTH1 family
10 Sobic.006G106400 OsDegp5 - Putative Deg protease homologue, expressed -
11 Sobic.006G047300 Minichromosome maintenance (MCM2/3/5) family protein("PubMedID : 26759170,PubMedID : 24597475")@EMB1688, putative, expressed K06949: rsgA, ribosome biogenesis GTPase / thiamine phosphate phosphatase
12 Sobic.007G208300 peptidase, putative, expressed K14677: aminoacylase
13 Sobic.008G095400 - -
14 Sobic.001G495200 Glutathione reductases(PubMedID : 23783412)@glutathione reductase, putative, expressed K00383: GSR, glutathione reductase (NADPH)
15 Sobic.001G025800 pentatricopeptide, putative, expressed -
16 Sobic.004G055500 inositol-1-monophosphatase, putative, expressed K01092: E3.1.3.25, IMPA, myo-inositol-1(or 4)-monophosphatase
17 Sobic.002G272100 expressed protein -
18 Sobic.002G218500 lecithine cholesterol acyltransferase, putative, expressed K00679: phospholipid:diacylglycerol acyltransferase
19 Sobic.003G225100 uroporphyrinogen decarboxylase, putative, expressed K01599: hemE, uroporphyrinogen decarboxylase
20 Sobic.002G109000 tetratricopeptide repeat containing protein, putative, expressed -


Gene co-expression network
sample Sobic002G217600 Sobic002G217600 Sobic005G117300 Sobic005G117300 Sobic002G217600--Sobic005G117300 Sobic006G091300 Sobic006G091300 Sobic002G217600--Sobic006G091300 Sobic004G301200 Sobic004G301200 Sobic002G217600--Sobic004G301200 Sobic002G304100 Sobic002G304100 Sobic002G217600--Sobic002G304100 Sobic010G204900 Sobic010G204900 Sobic002G217600--Sobic010G204900 Sobic010G202300 Sobic010G202300 Sobic002G217600--Sobic010G202300 Sobic003G267500 Sobic003G267500 Sobic002G217600--Sobic003G267500 Sobic003G162900 Sobic003G162900 Sobic002G217600--Sobic003G162900 Sobic003G265500 Sobic003G265500 Sobic002G217600--Sobic003G265500 Sobic004G003900 Sobic004G003900 Sobic005G117300--Sobic004G003900 Sobic009G092900 Sobic009G092900 Sobic005G117300--Sobic009G092900 Sobic009G085200 Sobic009G085200 Sobic005G117300--Sobic009G085200 Sobic001G025800 Sobic001G025800 Sobic005G117300--Sobic001G025800 Sobic008G090900 Sobic008G090900 Sobic005G117300--Sobic008G090900 Sobic004G065300 Sobic004G065300 Sobic005G117300--Sobic004G065300 Sobic001G346600 Sobic001G346600 Sobic005G117300--Sobic001G346600 Sobic001G495200 Sobic001G495200 Sobic005G117300--Sobic001G495200 Sobic007G208300 Sobic007G208300 Sobic005G117300--Sobic007G208300 Sobic004G055500 Sobic004G055500 Sobic006G091300--Sobic004G055500 Sobic006G106400 Sobic006G106400 Sobic006G091300--Sobic006G106400 Sobic001G291900 Sobic001G291900 Sobic006G091300--Sobic001G291900 Sobic008G172700 Sobic008G172700 Sobic006G091300--Sobic008G172700 Sobic006G091300--Sobic004G301200 Sobic006G091300--Sobic003G162900 Sobic004G165000 Sobic004G165000 Sobic006G091300--Sobic004G165000 Sobic006G047300 Sobic006G047300 Sobic006G091300--Sobic006G047300 Sobic001G277400 Sobic001G277400 Sobic006G091300--Sobic001G277400 Sobic004G301200--Sobic007G208300 Sobic004G301200--Sobic006G091300 Sobic004G301200--Sobic004G055500 Sobic004G144400 Sobic004G144400 Sobic004G301200--Sobic004G144400 Sobic003G085000 Sobic003G085000 Sobic004G301200--Sobic003G085000 Sobic001G424300 Sobic001G424300 Sobic004G301200--Sobic001G424300 Sobic002G424100 Sobic002G424100 Sobic004G301200--Sobic002G424100 Sobic004G301200--Sobic003G162900 Sobic004G301200--Sobic003G267500 Sobic002G043600 Sobic002G043600 Sobic002G304100--Sobic002G043600 Sobic002G304100--Sobic006G106400 Sobic004G011300 Sobic004G011300 Sobic002G304100--Sobic004G011300 Sobic003G352500 Sobic003G352500 Sobic002G304100--Sobic003G352500 Sobic002G304100--Sobic004G055500 Sobic003G232700 Sobic003G232700 Sobic002G304100--Sobic003G232700 Sobic008G039600 Sobic008G039600 Sobic002G304100--Sobic008G039600 Sobic002G304100--Sobic001G495200 Sobic002G272100 Sobic002G272100 Sobic002G304100--Sobic002G272100 Sobic001G032200 Sobic001G032200 Sobic010G204900--Sobic001G032200 Sobic010G204900--Sobic001G025800 Sobic010G204900--Sobic003G267500 Sobic010G100800 Sobic010G100800 Sobic010G204900--Sobic010G100800 Sobic003G120300 Sobic003G120300 Sobic010G204900--Sobic003G120300 Sobic004G130300 Sobic004G130300 Sobic010G204900--Sobic004G130300 Sobic001G250700 Sobic001G250700 Sobic010G204900--Sobic001G250700 Sobic010G204900--Sobic004G003900 Sobic010G204900--Sobic005G117300 Sobic002G353300 Sobic002G353300 Sobic010G202300--Sobic002G353300 Sobic003G324700 Sobic003G324700 Sobic010G202300--Sobic003G324700 Sobic003G386300 Sobic003G386300 Sobic010G202300--Sobic003G386300 Sobic003G439000 Sobic003G439000 Sobic010G202300--Sobic003G439000 Sobic001G469933 Sobic001G469933 Sobic010G202300--Sobic001G469933 Sobic001G122400 Sobic001G122400 Sobic010G202300--Sobic001G122400 Sobic001G368500 Sobic001G368500 Sobic010G202300--Sobic001G368500 Sobic004G179200 Sobic004G179200 Sobic010G202300--Sobic004G179200 Sobic001G168800 Sobic001G168800 Sobic010G202300--Sobic001G168800 Sobic003G267500--Sobic001G025800 Sobic003G267500--Sobic005G117300 Sobic003G267500--Sobic010G204900 Sobic003G267500--Sobic006G047300 Sobic003G267500--Sobic004G301200 Sobic009G005400 Sobic009G005400 Sobic003G267500--Sobic009G005400 Sobic002G013700 Sobic002G013700 Sobic003G267500--Sobic002G013700 Sobic010G134500 Sobic010G134500 Sobic003G267500--Sobic010G134500 Sobic007G090537 Sobic007G090537 Sobic003G267500--Sobic007G090537 Sobic003G162900--Sobic003G085000 Sobic003G162900--Sobic001G291900 Sobic006G256600 Sobic006G256600 Sobic003G162900--Sobic006G256600 Sobic003G162900--Sobic001G368500 Sobic003G162900--Sobic006G106400 Sobic003G162900--Sobic001G122400 Sobic003G162900--Sobic004G065300 Sobic003G271900 Sobic003G271900 Sobic003G162900--Sobic003G271900 Sobic003G432500 Sobic003G432500 Sobic003G162900--Sobic003G432500 Sobic003G225100 Sobic003G225100 Sobic003G265500--Sobic003G225100 Sobic005G184300 Sobic005G184300 Sobic003G265500--Sobic005G184300 Sobic003G265500--Sobic003G085000 Sobic003G265500--Sobic001G424300 Sobic010G221600 Sobic010G221600 Sobic003G265500--Sobic010G221600 Sobic004G307400 Sobic004G307400 Sobic003G265500--Sobic004G307400 Sobic003G265500--Sobic004G065300 Sobic003G265500--Sobic002G353300 Sobic001G104800 Sobic001G104800 Sobic003G265500--Sobic001G104800
Octagon: transcription factors


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