Gene annotation
Transcriptome id Sobic.003G210900.1
Synonym Sb03g027100
Functional annotation protein kinase, putative, expressed
UniProt C5XQ92
Pfam PF00069
Panther DB PTHR27001 PTHR27001:SF152
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT3G13690 : Protein kinase protein with adenine nucleotide alpha hydrolases-like domain
RAP-DB (Rice) LOC_Os01g41870.1 : protein kinase, putative, expressed
MaizeGDB (Corn) Zm00025a028628 , Zm00025a038461 , Zm00025a044764
Brachypodium KQK08610 , KQK08607 , KQK08609 , KQK08608
Barley -
Wheat TraesCS3A02G216100 , TraesCS3D02G217700 , TraesCS3B02G245800
Populus -


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cDNA sequences
Sobic.003G210900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G540800 DNA binding protein, putative, expressed -
2 Sobic.004G182900 PHD finger protein, putative, expressed -
3 Sobic.002G083900 RNA recognition motif containing protein, putative, expressed K12881: THOC4, THO complex subunit 4
4 Sobic.006G181000 -(PubMedID : 23915383)@PINHEAD, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C
5 Sobic.008G088842 - -
6 Sobic.010G145800 KH domain containing protein, putative, expressed K13162: poly(rC)-binding protein 2
7 Sobic.002G218500 lecithine cholesterol acyltransferase, putative, expressed K00679: phospholipid:diacylglycerol acyltransferase
8 Sobic.002G145000 DNA-directed RNA polymerase subunit, putative, expressed K03011: RPB3, DNA-directed RNA polymerase II subunit RPB3
9 Sobic.001G002600 expressed protein -
10 Sobic.009G007700 expressed protein -
11 Sobic.001G026500 Highest expression level in primordial inflorescence(PubMedID : 27501690)@OsSPL6 - SBP-box gene family member, expressed -
12 Sobic.002G424900 MAG2, putative, expressed -
13 Sobic.002G296100 mTERF domain containing protein, expressed K15032: mTERF domain-containing protein, mitochondrial
14 Sobic.001G448700 "TUD1(Ortholog in rice:Hu et al., 2013)"(PubMedID : 31659845)@U-box domain containing protein, expressed -
15 Sobic.004G019500 pentatricopeptide, putative, expressed -
16 Sobic.007G054400 FAR1 family protein, expressed -
17 Sobic.001G296400 palmitoyl-protein thioesterase 1 precursor, putative, expressed K01074: palmitoyl-protein thioesterase
18 Sobic.007G210000 ribosomal L18p/L5e family protein, expressed -
19 Sobic.003G167900 oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed -
20 Sobic.004G175600 tetratricopeptide repeat domain containing protein, expressed -


Gene co-expression network
sample Sobic003G210900 Sobic003G210900 Sobic001G540800 Sobic001G540800 Sobic003G210900--Sobic001G540800 Sobic004G182900 Sobic004G182900 Sobic003G210900--Sobic004G182900 Sobic002G083900 Sobic002G083900 Sobic003G210900--Sobic002G083900 Sobic006G181000 Sobic006G181000 Sobic003G210900--Sobic006G181000 Sobic008G088842 Sobic008G088842 Sobic003G210900--Sobic008G088842 Sobic010G145800 Sobic010G145800 Sobic003G210900--Sobic010G145800 Sobic002G218500 Sobic002G218500 Sobic003G210900--Sobic002G218500 Sobic002G145000 Sobic002G145000 Sobic003G210900--Sobic002G145000 Sobic001G002600 Sobic001G002600 Sobic003G210900--Sobic001G002600 Sobic006G036100 Sobic006G036100 Sobic001G540800--Sobic006G036100 Sobic002G425500 Sobic002G425500 Sobic001G540800--Sobic002G425500 Sobic002G145800 Sobic002G145800 Sobic001G540800--Sobic002G145800 Sobic001G540800--Sobic010G145800 Sobic004G019500 Sobic004G019500 Sobic001G540800--Sobic004G019500 Sobic001G227200 Sobic001G227200 Sobic001G540800--Sobic001G227200 Sobic006G269800 Sobic006G269800 Sobic001G540800--Sobic006G269800 Sobic001G020000 Sobic001G020000 Sobic001G540800--Sobic001G020000 Sobic002G309200 Sobic002G309200 Sobic001G540800--Sobic002G309200 Sobic004G294700 Sobic004G294700 Sobic004G182900--Sobic004G294700 Sobic009G191100 Sobic009G191100 Sobic004G182900--Sobic009G191100 Sobic007G136800 Sobic007G136800 Sobic004G182900--Sobic007G136800 Sobic004G178100 Sobic004G178100 Sobic004G182900--Sobic004G178100 Sobic006G031800 Sobic006G031800 Sobic004G182900--Sobic006G031800 Sobic004G183000 Sobic004G183000 Sobic004G182900--Sobic004G183000 Sobic002G358500 Sobic002G358500 Sobic004G182900--Sobic002G358500 Sobic010G016900 Sobic010G016900 Sobic004G182900--Sobic010G016900 Sobic010G043800 Sobic010G043800 Sobic004G182900--Sobic010G043800 Sobic010G085200 Sobic010G085200 Sobic002G083900--Sobic010G085200 Sobic001G234200 Sobic001G234200 Sobic002G083900--Sobic001G234200 Sobic003G167900 Sobic003G167900 Sobic002G083900--Sobic003G167900 Sobic006G010000 Sobic006G010000 Sobic002G083900--Sobic006G010000 Sobic001G251100 Sobic001G251100 Sobic002G083900--Sobic001G251100 Sobic002G083900--Sobic006G036100 Sobic008G088806 Sobic008G088806 Sobic002G083900--Sobic008G088806 Sobic009G238850 Sobic009G238850 Sobic002G083900--Sobic009G238850 Sobic004G086700 Sobic004G086700 Sobic002G083900--Sobic004G086700 Sobic006G181000--Sobic004G294700 Sobic002G296100 Sobic002G296100 Sobic006G181000--Sobic002G296100 Sobic006G181000--Sobic002G145000 Sobic007G029700 Sobic007G029700 Sobic006G181000--Sobic007G029700 Sobic006G181000--Sobic004G182900 Sobic006G181000--Sobic002G218500 Sobic001G037500 Sobic001G037500 Sobic006G181000--Sobic001G037500 Sobic006G181000--Sobic010G016900 Sobic008G001900 Sobic008G001900 Sobic006G181000--Sobic008G001900 Sobic010G138900 Sobic010G138900 Sobic008G088842--Sobic010G138900 Sobic006G140600 Sobic006G140600 Sobic008G088842--Sobic006G140600 Sobic002G143200 Sobic002G143200 Sobic008G088842--Sobic002G143200 Sobic010G262100 Sobic010G262100 Sobic008G088842--Sobic010G262100 Sobic003G311600 Sobic003G311600 Sobic008G088842--Sobic003G311600 Sobic001G451300 Sobic001G451300 Sobic008G088842--Sobic001G451300 Sobic006G280100 Sobic006G280100 Sobic008G088842--Sobic006G280100 Sobic006G208400 Sobic006G208400 Sobic008G088842--Sobic006G208400 Sobic002G340200 Sobic002G340200 Sobic008G088842--Sobic002G340200 Sobic007G203200 Sobic007G203200 Sobic010G145800--Sobic007G203200 Sobic010G140400 Sobic010G140400 Sobic010G145800--Sobic010G140400 Sobic010G145800--Sobic001G002600 Sobic010G145800--Sobic001G227200 Sobic009G260500 Sobic009G260500 Sobic010G145800--Sobic009G260500 Sobic007G011600 Sobic007G011600 Sobic010G145800--Sobic007G011600 Sobic001G083400 Sobic001G083400 Sobic010G145800--Sobic001G083400 Sobic010G237900 Sobic010G237900 Sobic010G145800--Sobic010G237900 Sobic001G219600 Sobic001G219600 Sobic010G145800--Sobic001G219600 Sobic006G128300 Sobic006G128300 Sobic002G218500--Sobic006G128300 Sobic002G218500--Sobic006G031800 Sobic006G038500 Sobic006G038500 Sobic002G218500--Sobic006G038500 Sobic001G043800 Sobic001G043800 Sobic002G218500--Sobic001G043800 Sobic002G431300 Sobic002G431300 Sobic002G218500--Sobic002G431300 Sobic002G218500--Sobic007G029700 Sobic001G516901 Sobic001G516901 Sobic002G218500--Sobic001G516901 Sobic004G079800 Sobic004G079800 Sobic002G218500--Sobic004G079800 Sobic005G084800 Sobic005G084800 Sobic002G218500--Sobic005G084800 Sobic002G145000--Sobic004G294700 Sobic002G145000--Sobic006G181000 Sobic002G145000--Sobic004G182900 Sobic002G145000--Sobic001G043800 Sobic002G145000--Sobic004G086700 Sobic007G159000 Sobic007G159000 Sobic002G145000--Sobic007G159000 Sobic003G443500 Sobic003G443500 Sobic002G145000--Sobic003G443500 Sobic001G465700 Sobic001G465700 Sobic002G145000--Sobic001G465700 Sobic006G260800 Sobic006G260800 Sobic002G145000--Sobic006G260800 Sobic001G002600--Sobic010G237900 Sobic004G129300 Sobic004G129300 Sobic001G002600--Sobic004G129300 Sobic001G002600--Sobic010G145800 Sobic004G155600 Sobic004G155600 Sobic001G002600--Sobic004G155600 Sobic006G118700 Sobic006G118700 Sobic001G002600--Sobic006G118700 Sobic007G191700 Sobic007G191700 Sobic001G002600--Sobic007G191700 Sobic006G096900 Sobic006G096900 Sobic001G002600--Sobic006G096900 Sobic006G014100 Sobic006G014100 Sobic001G002600--Sobic006G014100 Sobic003G133900 Sobic003G133900 Sobic001G002600--Sobic003G133900
Octagon: transcription factors


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