Gene annotation
Transcriptome id Sobic.004G212400.2
Synonym EMB1241, Sb04g025770
Functional annotation co-chaperone GrpE protein, putative, expressed
UniProt A0A1Z5RNN9
Pfam PF01025
Panther DB PTHR21237 PTHR21237:SF27
NCBI CDD KOG3003; Molecular chaperone of the GrpE family
KEGG Orthology K03687; molecular chaperone GrpE
Gene Ontology GO:0006457; protein folding GO:0000774adenyl-nucleotide exchange factor activity


Orthologs (automatic annotation)
TAIR AT5G17710 : Co-chaperone GrpE family protein
RAP-DB (Rice) LOC_Os02g39870.1 : co-chaperone GrpE protein, putative, expressed
MaizeGDB (Corn) Zm00025a021202 , Zm00025a031935
Brachypodium -
Barley HORVU6Hr1G056280.1 , HORVU6Hr1G056280.3 , HORVU6Hr1G056280.4
Wheat TraesCS6A02G231900 , TraesCS6D02G203300 , TraesCS6B02G249700 , TraesCS6B02G249700
Populus -


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cDNA sequences
Sobic.004G212400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G090400 expressed protein -
2 Sobic.003G271900 expressed protein -
3 Sobic.001G368500 ribosomal protein L6, putative, expressed K02933: RP-L6, MRPL6, large subunit ribosomal protein L6
4 Sobic.009G085200 glyoxalase family protein, putative, expressed K01759: GLO1, lactoylglutathione lyase
5 Sobic.003G432500 Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@signal recognition particle receptor, putative, expressed K03110: fused signal recognition particle receptor
6 Sobic.004G065300 CR084 protein, putative, expressed -
7 Sobic.004G336000 chaperone protein dnaJ, putative, expressed K03686: molecular chaperone DnaJ
8 Sobic.006G055800 mttA/Hcf106 family protein, putative, expressed -
9 Sobic.002G304100 tRNA synthetases class II domain containing protein, expressed K01893: NARS, asparaginyl-tRNA synthetase
10 Sobic.003G324700 expressed protein -
11 Sobic.006G021600 uncharacterized membrane protein, putative, expressed -
12 Sobic.002G152800 RNA recognition motif containing protein, putative, expressed -
13 Sobic.008G073100 uncharacterized protein ycf45, putative, expressed -
14 Sobic.005G110400 pentatricopeptide repeat protein PPR986-12, putative, expressed -
15 Sobic.001G531400 riboflavin biosynthesis protein ribD, putative, expressed K11752: diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase
16 Sobic.006G132000 glycine-rich protein, putative, expressed -
17 Sobic.004G011300 S1 RNA binding domain containing protein, expressed -
18 Sobic.001G104800 expressed protein -
19 Sobic.005G117300 ABC transporter, ATP-binding protein, putative, expressed -
20 Sobic.003G083400 cytoskeletal protein, putative, expressed -


Gene co-expression network
sample Sobic004G212400 Sobic004G212400 Sobic007G090400 Sobic007G090400 Sobic004G212400--Sobic007G090400 Sobic003G271900 Sobic003G271900 Sobic004G212400--Sobic003G271900 Sobic001G368500 Sobic001G368500 Sobic004G212400--Sobic001G368500 Sobic009G085200 Sobic009G085200 Sobic004G212400--Sobic009G085200 Sobic003G432500 Sobic003G432500 Sobic004G212400--Sobic003G432500 Sobic004G065300 Sobic004G065300 Sobic004G212400--Sobic004G065300 Sobic004G336000 Sobic004G336000 Sobic004G212400--Sobic004G336000 Sobic006G055800 Sobic006G055800 Sobic004G212400--Sobic006G055800 Sobic002G304100 Sobic002G304100 Sobic004G212400--Sobic002G304100 Sobic003G324700 Sobic003G324700 Sobic007G090400--Sobic003G324700 Sobic002G152800 Sobic002G152800 Sobic007G090400--Sobic002G152800 Sobic007G090400--Sobic001G368500 Sobic007G090400--Sobic006G055800 Sobic007G090400--Sobic003G271900 Sobic001G104800 Sobic001G104800 Sobic007G090400--Sobic001G104800 Sobic007G090400--Sobic004G336000 Sobic001G531400 Sobic001G531400 Sobic007G090400--Sobic001G531400 Sobic007G090400--Sobic003G432500 Sobic003G271900--Sobic001G368500 Sobic003G271900--Sobic003G432500 Sobic002G272100 Sobic002G272100 Sobic003G271900--Sobic002G272100 Sobic005G143500 Sobic005G143500 Sobic003G271900--Sobic005G143500 Sobic003G271900--Sobic003G324700 Sobic003G271900--Sobic006G055800 Sobic008G039600 Sobic008G039600 Sobic003G271900--Sobic008G039600 Sobic005G110400 Sobic005G110400 Sobic003G271900--Sobic005G110400 Sobic006G106400 Sobic006G106400 Sobic003G271900--Sobic006G106400 Sobic001G368500--Sobic003G324700 Sobic001G368500--Sobic005G110400 Sobic001G368500--Sobic003G432500 Sobic001G469933 Sobic001G469933 Sobic001G368500--Sobic001G469933 Sobic001G122400 Sobic001G122400 Sobic001G368500--Sobic001G122400 Sobic008G073100 Sobic008G073100 Sobic001G368500--Sobic008G073100 Sobic002G401800 Sobic002G401800 Sobic001G368500--Sobic002G401800 Sobic001G368500--Sobic003G271900 Sobic001G368500--Sobic005G143500 Sobic009G085200--Sobic004G065300 Sobic003G085000 Sobic003G085000 Sobic009G085200--Sobic003G085000 Sobic010G255100 Sobic010G255100 Sobic009G085200--Sobic010G255100 Sobic005G117300 Sobic005G117300 Sobic009G085200--Sobic005G117300 Sobic009G085200--Sobic006G055800 Sobic008G090900 Sobic008G090900 Sobic009G085200--Sobic008G090900 Sobic002G109000 Sobic002G109000 Sobic009G085200--Sobic002G109000 Sobic009G085200--Sobic003G271900 Sobic003G128400 Sobic003G128400 Sobic009G085200--Sobic003G128400 Sobic003G432500--Sobic001G368500 Sobic003G432500--Sobic006G055800 Sobic003G432500--Sobic001G469933 Sobic003G432500--Sobic003G271900 Sobic003G432500--Sobic005G110400 Sobic003G432500--Sobic003G324700 Sobic003G432500--Sobic008G073100 Sobic003G432500--Sobic004G336000 Sobic003G432500--Sobic002G152800 Sobic004G065300--Sobic001G368500 Sobic004G065300--Sobic006G055800 Sobic004G065300--Sobic003G432500 Sobic004G065300--Sobic005G110400 Sobic004G065300--Sobic003G324700 Sobic006G256600 Sobic006G256600 Sobic004G065300--Sobic006G256600 Sobic005G002900 Sobic005G002900 Sobic004G065300--Sobic005G002900 Sobic004G065300--Sobic001G469933 Sobic002G297400 Sobic002G297400 Sobic004G065300--Sobic002G297400 Sobic001G309300 Sobic001G309300 Sobic004G336000--Sobic001G309300 Sobic001G495200 Sobic001G495200 Sobic004G336000--Sobic001G495200 Sobic004G336000--Sobic008G073100 Sobic001G291900 Sobic001G291900 Sobic004G336000--Sobic001G291900 Sobic004G336000--Sobic003G432500 Sobic004G336000--Sobic006G055800 Sobic004G011300 Sobic004G011300 Sobic004G336000--Sobic004G011300 Sobic004G336000--Sobic003G085000 Sobic003G387100 Sobic003G387100 Sobic004G336000--Sobic003G387100 Sobic006G055800--Sobic003G432500 Sobic006G055800--Sobic003G324700 Sobic006G055800--Sobic005G002900 Sobic006G055800--Sobic001G469933 Sobic006G055800--Sobic001G368500 Sobic009G148500 Sobic009G148500 Sobic006G055800--Sobic009G148500 Sobic006G055800--Sobic002G152800 Sobic001G083100 Sobic001G083100 Sobic006G055800--Sobic001G083100 Sobic006G055800--Sobic005G110400 Sobic002G043600 Sobic002G043600 Sobic002G304100--Sobic002G043600 Sobic002G304100--Sobic006G106400 Sobic002G304100--Sobic004G011300 Sobic003G352500 Sobic003G352500 Sobic002G304100--Sobic003G352500 Sobic004G055500 Sobic004G055500 Sobic002G304100--Sobic004G055500 Sobic003G232700 Sobic003G232700 Sobic002G304100--Sobic003G232700 Sobic002G304100--Sobic008G039600 Sobic002G304100--Sobic001G495200 Sobic002G304100--Sobic002G272100
Octagon: transcription factors


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