Gene annotation
Transcriptome id Sobic.002G348600.1
Synonym Sb02g037120
Functional annotation zinc finger family protein, putative, expressed
UniProt C5XCB9
Pfam PF01363
Panther DB PTHR22835 PTHR22835:SF196
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G20110 : RING/FYVE/PHD zinc finger superfamily protein
RAP-DB (Rice) LOC_Os07g38580.1 : zinc finger family protein, putative, expressed
MaizeGDB (Corn) Zm00025a048468
Brachypodium -
Barley HORVU2Hr1G037770.1 , HORVU2Hr1G037770.2 , HORVU2Hr1G037770.3 , HORVU2Hr1G037770.4 , HORVU2Hr1G037770.5
Wheat TraesCS2A02G184400 , TraesCS2A02G184400 , TraesCS2D02G203300 , TraesCS2B02G223000
Populus -


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cDNA sequences
Sobic.002G348600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G052400 proline-rich family protein, putative, expressed -
2 Sobic.001G323000 UBX domain-containing protein, putative, expressed K18726: FAF2, FAS-associated factor 2
3 Sobic.009G160200 prenylated rab acceptor, putative, expressed -
4 Sobic.001G005600 CBS domain containing membrane protein, putative, expressed -
5 Sobic.001G206900 vacuolar protein-sorting protein bro1, putative, expressed K12200: PDCD6IP, ALIX, programmed cell death 6-interacting protein
6 Sobic.001G015800 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
7 Sobic.001G105500 heat shock protein DnaJ, putative, expressed -
8 Sobic.010G094600 zinc finger, C3HC4 type, domain containing protein, expressed -
9 Sobic.001G311100 ubiquitin family protein, putative, expressed K04523: UBQLN, ubiquilin
10 Sobic.010G105600 RNA recognition motif containing protein, putative, expressed K12881: THOC4, THO complex subunit 4
11 Sobic.004G274400 GCN5-related N-acetyltransferase, putative, expressed -
12 Sobic.003G312200 signal recognition particle 54 kDa protein, putative, expressed K03106: SRP54, signal recognition particle subunit SRP54
13 Sobic.004G068500 CUE domain containing protein, expressed -
14 Sobic.010G129600 dual specificity protein phosphatase, putative, expressed K04459: DUSP, dual specificity MAP kinase phosphatase
15 Sobic.005G074500 VHS and GAT domain containing protein, expressed -
16 Sobic.004G010900 OsFBK2 - F-box domain and kelch repeat containing protein, expressed -
17 Sobic.006G034000 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
18 Sobic.008G053600 alpha-1,4-fucosyltransferase, putative, expressed K14412: FUT13, alpha-1,4-fucosyltransferase
19 Sobic.009G050700 importin subunit alpha, putative, expressed -
20 Sobic.003G405700 exo70 exocyst complex subunit domain containing protein, expressed K07195: EXOC7, exocyst complex component 7


Gene co-expression network
sample Sobic002G348600 Sobic002G348600 Sobic003G052400 Sobic003G052400 Sobic002G348600--Sobic003G052400 Sobic001G323000 Sobic001G323000 Sobic002G348600--Sobic001G323000 Sobic009G160200 Sobic009G160200 Sobic002G348600--Sobic009G160200 Sobic001G005600 Sobic001G005600 Sobic002G348600--Sobic001G005600 Sobic001G206900 Sobic001G206900 Sobic002G348600--Sobic001G206900 Sobic001G015800 Sobic001G015800 Sobic002G348600--Sobic001G015800 Sobic001G105500 Sobic001G105500 Sobic002G348600--Sobic001G105500 Sobic010G094600 Sobic010G094600 Sobic002G348600--Sobic010G094600 Sobic001G311100 Sobic001G311100 Sobic002G348600--Sobic001G311100 Sobic010G017000 Sobic010G017000 Sobic003G052400--Sobic010G017000 Sobic001G408100 Sobic001G408100 Sobic003G052400--Sobic001G408100 Sobic003G052400--Sobic002G348600 Sobic001G067900 Sobic001G067900 Sobic003G052400--Sobic001G067900 Sobic008G003600 Sobic008G003600 Sobic003G052400--Sobic008G003600 Sobic003G217100 Sobic003G217100 Sobic003G052400--Sobic003G217100 Sobic003G052400--Sobic009G160200 Sobic006G257001 Sobic006G257001 Sobic003G052400--Sobic006G257001 Sobic001G237500 Sobic001G237500 Sobic003G052400--Sobic001G237500 Sobic001G323000--Sobic001G206900 Sobic006G034000 Sobic006G034000 Sobic001G323000--Sobic006G034000 Sobic009G228700 Sobic009G228700 Sobic001G323000--Sobic009G228700 Sobic001G057800 Sobic001G057800 Sobic001G323000--Sobic001G057800 Sobic003G312200 Sobic003G312200 Sobic001G323000--Sobic003G312200 Sobic006G148200 Sobic006G148200 Sobic001G323000--Sobic006G148200 Sobic009G207000 Sobic009G207000 Sobic001G323000--Sobic009G207000 Sobic010G000900 Sobic010G000900 Sobic001G323000--Sobic010G000900 Sobic001G085100 Sobic001G085100 Sobic001G323000--Sobic001G085100 Sobic001G283500 Sobic001G283500 Sobic009G160200--Sobic001G283500 Sobic006G222400 Sobic006G222400 Sobic009G160200--Sobic006G222400 Sobic009G160200--Sobic001G311100 Sobic009G160200--Sobic010G017000 Sobic009G160200--Sobic003G217100 Sobic002G261900 Sobic002G261900 Sobic009G160200--Sobic002G261900 Sobic009G160200--Sobic010G094600 Sobic003G043400 Sobic003G043400 Sobic009G160200--Sobic003G043400 Sobic009G160200--Sobic003G052400 Sobic009G160600 Sobic009G160600 Sobic001G005600--Sobic009G160600 Sobic010G129600 Sobic010G129600 Sobic001G005600--Sobic010G129600 Sobic007G042900 Sobic007G042900 Sobic001G005600--Sobic007G042900 Sobic008G140400 Sobic008G140400 Sobic001G005600--Sobic008G140400 Sobic003G150900 Sobic003G150900 Sobic001G005600--Sobic003G150900 Sobic004G323700 Sobic004G323700 Sobic001G005600--Sobic004G323700 Sobic004G068500 Sobic004G068500 Sobic001G005600--Sobic004G068500 Sobic008G021000 Sobic008G021000 Sobic001G005600--Sobic008G021000 Sobic001G161900 Sobic001G161900 Sobic001G005600--Sobic001G161900 Sobic001G206900--Sobic001G323000 Sobic001G206900--Sobic003G312200 Sobic004G010900 Sobic004G010900 Sobic001G206900--Sobic004G010900 Sobic004G181900 Sobic004G181900 Sobic001G206900--Sobic004G181900 Sobic001G206900--Sobic001G085100 Sobic009G149500 Sobic009G149500 Sobic001G206900--Sobic009G149500 Sobic001G206900--Sobic006G148200 Sobic007G167900 Sobic007G167900 Sobic001G206900--Sobic007G167900 Sobic003G349300 Sobic003G349300 Sobic001G206900--Sobic003G349300 Sobic001G163400 Sobic001G163400 Sobic001G015800--Sobic001G163400 Sobic008G124900 Sobic008G124900 Sobic001G015800--Sobic008G124900 Sobic003G104000 Sobic003G104000 Sobic001G015800--Sobic003G104000 Sobic003G331400 Sobic003G331400 Sobic001G015800--Sobic003G331400 Sobic006G033200 Sobic006G033200 Sobic001G015800--Sobic006G033200 Sobic004G286500 Sobic004G286500 Sobic001G015800--Sobic004G286500 Sobic002G134600 Sobic002G134600 Sobic001G015800--Sobic002G134600 Sobic001G096000 Sobic001G096000 Sobic001G015800--Sobic001G096000 Sobic003G337300 Sobic003G337300 Sobic001G015800--Sobic003G337300 Sobic001G031600 Sobic001G031600 Sobic001G105500--Sobic001G031600 Sobic009G219000 Sobic009G219000 Sobic001G105500--Sobic009G219000 Sobic009G193400 Sobic009G193400 Sobic001G105500--Sobic009G193400 Sobic002G040700 Sobic002G040700 Sobic001G105500--Sobic002G040700 Sobic001G391600 Sobic001G391600 Sobic001G105500--Sobic001G391600 Sobic001G541100 Sobic001G541100 Sobic001G105500--Sobic001G541100 Sobic006G225600 Sobic006G225600 Sobic001G105500--Sobic006G225600 Sobic009G050700 Sobic009G050700 Sobic001G105500--Sobic009G050700 Sobic001G105500--Sobic001G323000 Sobic010G094600--Sobic001G311100 Sobic010G094600--Sobic009G160200 Sobic010G094600--Sobic003G052400 Sobic001G516100 Sobic001G516100 Sobic010G094600--Sobic001G516100 Sobic007G006600 Sobic007G006600 Sobic010G094600--Sobic007G006600 Sobic010G094600--Sobic001G283500 Sobic010G094600--Sobic002G348600 Sobic010G094600--Sobic002G261900 Sobic002G083266 Sobic002G083266 Sobic010G094600--Sobic002G083266 Sobic001G311100--Sobic002G261900 Sobic001G311100--Sobic010G094600 Sobic001G311100--Sobic009G160200 Sobic001G311100--Sobic003G043400 Sobic010G026700 Sobic010G026700 Sobic001G311100--Sobic010G026700 Sobic001G311100--Sobic001G283500 Sobic010G188100 Sobic010G188100 Sobic001G311100--Sobic010G188100 Sobic001G311100--Sobic010G017000 Sobic001G311100--Sobic002G083266
Octagon: transcription factors


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