Gene annotation
Transcriptome id Sobic.002G333300.1
Synonym Sb02g035920, RK3, ARK3
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
serine/threonine-protein kinase receptor precursor, putative, expressed
UniProt A0A1B6QEU8 , H0I4E1 , H0I4A5 , H0I4F5 , Q09EJ9
Pfam PF11883 PF08276 PF00954 PF01453 PF07714
Panther DB PTHR27002 PTHR27002:SF9
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0004674; protein serine/threonine kinase activity GO:0006468protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT4G21380 : receptor kinase 3
RAP-DB (Rice) LOC_Os07g36544.2 : serine/threonine-protein kinase receptor precursor, putative, expressed
MaizeGDB (Corn) Zm00025a044078 , Zm00025a006256 , Zm00025a048337 , Zm00025a048280 , Zm00025a027260
Brachypodium KQK15839 , KQK15913
Barley HORVU2Hr1G030320.1 , HORVU1Hr1G074310.1 , HORVU1Hr1G074310.2 , HORVU1Hr1G074310.3 , HORVU1Hr1G074310.4 , HORVU1Hr1G074310.6 , HORVU1Hr1G074310.7 , HORVU1Hr1G074310.8 , HORVU1Hr1G074310.9 , HORVU1Hr1G074310.5 , HORVU2Hr1G042550.1 , HORVU2Hr1G042550.2 , HORVU2Hr1G042550.3 , HORVU2Hr1G008130.10 , HORVU1Hr1G088580.6 , HORVU1Hr1G088580.7 , HORVU1Hr1G088580.4 , HORVU1Hr1G088580.5 , HORVU1Hr1G088580.2 , HORVU1Hr1G088580.3 , HORVU1Hr1G088580.1 , HORVU2Hr1G111460.3 , HORVU2Hr1G111460.2 , HORVU2Hr1G111460.1 , HORVU1Hr1G074310.10 , HORVU1Hr1G074310.11 , HORVU1Hr1G074310.16 , HORVU1Hr1G074310.14 , HORVU1Hr1G074310.15 , HORVU1Hr1G088580.15 , HORVU1Hr1G088580.10 , HORVU1Hr1G088580.11 , HORVU1Hr1G088580.12 , HORVU1Hr1G088580.13 , HORVU1Hr1G088580.8 , HORVU1Hr1G088580.9 , HORVU2Hr1G008130.8 , HORVU2Hr1G008130.2 , HORVU2Hr1G008130.3 , HORVU2Hr1G008130.4 , HORVU2Hr1G008130.6 , HORVU2Hr1G008130.7 , HORVU5Hr1G111240.4 , HORVU5Hr1G111240.5 , HORVU5Hr1G111240.6 , HORVU5Hr1G111240.7 , HORVU5Hr1G111240.2 , HORVU5Hr1G111240.3 , HORVU5Hr1G111240.8 , HORVU5Hr1G111240.9 , HORVU2Hr1G008130.9 , HORVU2Hr1G008130.1
Wheat TraesCS1A02G273600 , TraesCS1D02G239700 , TraesCS2D02G217600 , TraesCS2D02G500900 , TraesCS2B02G528600 , TraesCS2A02G500700 , TraesCS3B02G352700 , TraesCS3B02G352700 , TraesCS3B02G352700 , TraesCS2A02G211900 , TraesCS1D02G273600 , TraesCS1D02G273600 , TraesCS1D02G273600 , TraesCS1D02G273600 , TraesCS1D02G273600 , TraesCS1D02G273800 , TraesCS1D02G273800 , TraesCS7B02G195500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G039100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.010G220200 haloacid dehalogenase-like hydrolase domain-containing protein 3, putative, expressed -
3 Sobic.006G190500 expressed protein -
4 Sobic.001G483400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lipoxygenase protein, putative, expressed K00454: lipoxygenase
5 Sobic.002G374100 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@zinc-finger protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
6 Sobic.010G217800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.006G230500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
8 Sobic.002G261100 expressed protein -
9 Sobic.005G010200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.002G333400 KI domain interacting kinase 1, putative, expressed -
11 Sobic.002G261200 expressed protein -
12 Sobic.003G334600 NAC domain transcription factor, putative, expressed -
13 Sobic.006G230800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -
14 Sobic.002G415600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@transcription factor(PubMedID : 30367619)@AP2 domain containing protein, expressed K09286: EREBP-like factor
15 Sobic.006G230900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -
16 Sobic.001G206400 fiber protein Fb34, putative, expressed -
17 Sobic.004G280200 tobamovirus multiplication protein, putative, expressed -
18 Sobic.006G190100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@naringenin,2-oxoglutarate 3-dioxygenase, putative, expressed -
19 Sobic.001G320900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
20 Sobic.009G247300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@WRKY11, expressed -


Gene co-expression network
sample Sobic002G333300 Sobic002G333300 Sobic005G039100 Sobic005G039100 Sobic002G333300--Sobic005G039100 Sobic010G220200 Sobic010G220200 Sobic002G333300--Sobic010G220200 Sobic006G190500 Sobic006G190500 Sobic002G333300--Sobic006G190500 Sobic001G483400 Sobic001G483400 Sobic002G333300--Sobic001G483400 Sobic002G374100 Sobic002G374100 Sobic002G333300--Sobic002G374100 Sobic010G217800 Sobic010G217800 Sobic002G333300--Sobic010G217800 Sobic006G230500 Sobic006G230500 Sobic002G333300--Sobic006G230500 Sobic002G261100 Sobic002G261100 Sobic002G333300--Sobic002G261100 Sobic005G010200 Sobic005G010200 Sobic002G333300--Sobic005G010200 Sobic001G320900 Sobic001G320900 Sobic005G039100--Sobic001G320900 Sobic009G036000 Sobic009G036000 Sobic005G039100--Sobic009G036000 Sobic009G169000 Sobic009G169000 Sobic005G039100--Sobic009G169000 Sobic004G280200 Sobic004G280200 Sobic005G039100--Sobic004G280200 Sobic003G387000 Sobic003G387000 Sobic005G039100--Sobic003G387000 Sobic009G036100 Sobic009G036100 Sobic005G039100--Sobic009G036100 Sobic005G039100--Sobic006G230500 Sobic003G334600 Sobic003G334600 Sobic005G039100--Sobic003G334600 Sobic003G148600 Sobic003G148600 Sobic005G039100--Sobic003G148600 Sobic010G220200--Sobic010G217800 Sobic010G220200--Sobic005G010200 Sobic002G415600 Sobic002G415600 Sobic010G220200--Sobic002G415600 Sobic010G220200--Sobic006G190500 Sobic006G230800 Sobic006G230800 Sobic010G220200--Sobic006G230800 Sobic003G288600 Sobic003G288600 Sobic010G220200--Sobic003G288600 Sobic006G231100 Sobic006G231100 Sobic010G220200--Sobic006G231100 Sobic008G177800 Sobic008G177800 Sobic010G220200--Sobic008G177800 Sobic006G230900 Sobic006G230900 Sobic010G220200--Sobic006G230900 Sobic006G190500--Sobic006G230800 Sobic003G123600 Sobic003G123600 Sobic006G190500--Sobic003G123600 Sobic006G190100 Sobic006G190100 Sobic006G190500--Sobic006G190100 Sobic006G190500--Sobic002G415600 Sobic006G190500--Sobic006G230900 Sobic009G111200 Sobic009G111200 Sobic006G190500--Sobic009G111200 Sobic006G190500--Sobic010G217800 Sobic003G144700 Sobic003G144700 Sobic006G190500--Sobic003G144700 Sobic006G190500--Sobic010G220200 Sobic001G483400--Sobic005G010200 Sobic001G483400--Sobic010G220200 Sobic009G129000 Sobic009G129000 Sobic001G483400--Sobic009G129000 Sobic002G174200 Sobic002G174200 Sobic001G483400--Sobic002G174200 Sobic004G065500 Sobic004G065500 Sobic001G483400--Sobic004G065500 Sobic001G483400--Sobic006G230900 Sobic001G483400--Sobic006G190500 Sobic001G483400--Sobic010G217800 Sobic002G082600 Sobic002G082600 Sobic001G483400--Sobic002G082600 Sobic002G294700 Sobic002G294700 Sobic002G374100--Sobic002G294700 Sobic010G246000 Sobic010G246000 Sobic002G374100--Sobic010G246000 Sobic001G516600 Sobic001G516600 Sobic002G374100--Sobic001G516600 Sobic002G354900 Sobic002G354900 Sobic002G374100--Sobic002G354900 Sobic010G228000 Sobic010G228000 Sobic002G374100--Sobic010G228000 Sobic004G036600 Sobic004G036600 Sobic002G374100--Sobic004G036600 Sobic002G353400 Sobic002G353400 Sobic002G374100--Sobic002G353400 Sobic002G374100--Sobic008G177800 Sobic002G118600 Sobic002G118600 Sobic002G374100--Sobic002G118600 Sobic010G217800--Sobic002G415600 Sobic010G217800--Sobic006G230900 Sobic010G217800--Sobic003G144700 Sobic010G217800--Sobic003G123600 Sobic006G231200 Sobic006G231200 Sobic010G217800--Sobic006G231200 Sobic010G217800--Sobic006G231100 Sobic006G267200 Sobic006G267200 Sobic010G217800--Sobic006G267200 Sobic010G217800--Sobic010G220200 Sobic010G217800--Sobic008G177800 Sobic010G086200 Sobic010G086200 Sobic006G230500--Sobic010G086200 Sobic009G200700 Sobic009G200700 Sobic006G230500--Sobic009G200700 Sobic003G382800 Sobic003G382800 Sobic006G230500--Sobic003G382800 Sobic001G387900 Sobic001G387900 Sobic006G230500--Sobic001G387900 Sobic004G177700 Sobic004G177700 Sobic006G230500--Sobic004G177700 Sobic006G230500--Sobic001G320900 Sobic006G230500--Sobic003G148600 Sobic002G423300 Sobic002G423300 Sobic006G230500--Sobic002G423300 Sobic006G230500--Sobic010G217800 Sobic003G367200 Sobic003G367200 Sobic002G261100--Sobic003G367200 Sobic002G261100--Sobic004G280200 Sobic002G261200 Sobic002G261200 Sobic002G261100--Sobic002G261200 Sobic006G056400 Sobic006G056400 Sobic002G261100--Sobic006G056400 Sobic001G112200 Sobic001G112200 Sobic002G261100--Sobic001G112200 Sobic010G166500 Sobic010G166500 Sobic002G261100--Sobic010G166500 Sobic002G261100--Sobic003G334600 Sobic001G138600 Sobic001G138600 Sobic002G261100--Sobic001G138600 Sobic002G224500 Sobic002G224500 Sobic002G261100--Sobic002G224500 Sobic005G010200--Sobic010G220200 Sobic005G010200--Sobic001G483400 Sobic005G010200--Sobic008G177800 Sobic005G010200--Sobic009G111200 Sobic005G010200--Sobic006G190500 Sobic005G010200--Sobic010G217800 Sobic005G010200--Sobic002G415600 Sobic009G066800 Sobic009G066800 Sobic005G010200--Sobic009G066800 Sobic005G010200--Sobic009G129000
Octagon: transcription factors


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