Gene annotation
Transcriptome id Sobic.006G087400.1
Synonym Sb06g017320
Functional annotation expressed protein
UniProt C5Y8S6
Pfam PF02698
Panther DB PTHR28110 PTHR28110:SF1
NCBI CDD KOG4533; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G21370 : -
RAP-DB (Rice) LOC_Os04g35780.1 : expressed protein
MaizeGDB (Corn) Zm00025a056105
Brachypodium KQJ82739
Barley HORVU0Hr1G004790.2 , HORVU0Hr1G004790.3 , HORVU0Hr1G004790.1
Wheat TraesCS2A02G307500 , TraesCS2B02G324100 , TraesCS2D02G305900
Populus -


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cDNA sequences
Sobic.006G087400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G155800 actin polymerization factor, putative, expressed K05754: actin related protein 2/3 complex, subunit 5
2 Sobic.001G144600 parafibromin, putative, expressed K15175: parafibromin
3 Sobic.002G259400 zinc finger DHHC domain-containing protein, putative, expressed K16675: palmitoyltransferase ZDHHC9/14/18
4 Sobic.009G174000 expressed protein -
5 Sobic.001G008800 expressed protein -
6 Sobic.002G294100 DOMON domain containing protein, expressed -
7 Sobic.002G058700 RNA recognition motif containing protein, expressed K12885: RBMX, heterogeneous nuclear ribonucleoprotein G
8 Sobic.009G120500 golgi transport complex protein-related, putative, expressed -
9 Sobic.010G230600 DnaK family protein, putative, expressed K09489: heat shock 70kDa protein 4
10 Sobic.004G136500 - -
11 Sobic.001G276200 ACI13, putative, expressed -
12 Sobic.010G085200 mediator of RNA polymerase II transcription subunit 6, putative, expressed K15128: mediator of RNA polymerase II transcription subunit 6
13 Sobic.001G358500 GA20734-PA, putative, expressed -
14 Sobic.004G184000 SFT2, putative, expressed -
15 Sobic.004G117800 Ser/Thr protein phosphatase family protein, putative, expressed K18467: vacuolar protein sorting-associated protein 29
16 Sobic.001G335000 erlin-2 precursor, putative, expressed -
17 Sobic.003G058900 TATA-binding protein-associated factor 2N, putative, expressed K13098: TLS, RNA-binding protein FUS
18 Sobic.001G449900 conserved oligomeric complex COG6 family protein, expressed -
19 Sobic.001G451901 - -
20 Sobic.003G122400 expressed protein -


Gene co-expression network
sample Sobic006G087400 Sobic006G087400 Sobic005G155800 Sobic005G155800 Sobic006G087400--Sobic005G155800 Sobic001G144600 Sobic001G144600 Sobic006G087400--Sobic001G144600 Sobic002G259400 Sobic002G259400 Sobic006G087400--Sobic002G259400 Sobic009G174000 Sobic009G174000 Sobic006G087400--Sobic009G174000 Sobic001G008800 Sobic001G008800 Sobic006G087400--Sobic001G008800 Sobic002G294100 Sobic002G294100 Sobic006G087400--Sobic002G294100 Sobic002G058700 Sobic002G058700 Sobic006G087400--Sobic002G058700 Sobic009G120500 Sobic009G120500 Sobic006G087400--Sobic009G120500 Sobic010G230600 Sobic010G230600 Sobic006G087400--Sobic010G230600 Sobic005G155800--Sobic006G087400 Sobic005G155800--Sobic009G174000 Sobic005G155800--Sobic002G259400 Sobic001G428800 Sobic001G428800 Sobic005G155800--Sobic001G428800 Sobic005G155800--Sobic010G230600 Sobic008G103800 Sobic008G103800 Sobic005G155800--Sobic008G103800 Sobic004G232800 Sobic004G232800 Sobic005G155800--Sobic004G232800 Sobic007G165900 Sobic007G165900 Sobic005G155800--Sobic007G165900 Sobic001G384400 Sobic001G384400 Sobic005G155800--Sobic001G384400 Sobic003G368800 Sobic003G368800 Sobic001G144600--Sobic003G368800 Sobic001G144600--Sobic006G087400 Sobic001G144600--Sobic001G008800 Sobic001G036300 Sobic001G036300 Sobic001G144600--Sobic001G036300 Sobic003G058900 Sobic003G058900 Sobic001G144600--Sobic003G058900 Sobic010G085200 Sobic010G085200 Sobic001G144600--Sobic010G085200 Sobic009G056300 Sobic009G056300 Sobic001G144600--Sobic009G056300 Sobic001G276200 Sobic001G276200 Sobic001G144600--Sobic001G276200 Sobic002G131300 Sobic002G131300 Sobic001G144600--Sobic002G131300 Sobic003G119400 Sobic003G119400 Sobic002G259400--Sobic003G119400 Sobic004G074300 Sobic004G074300 Sobic002G259400--Sobic004G074300 Sobic001G041200 Sobic001G041200 Sobic002G259400--Sobic001G041200 Sobic002G268400 Sobic002G268400 Sobic002G259400--Sobic002G268400 Sobic009G033900 Sobic009G033900 Sobic002G259400--Sobic009G033900 Sobic010G269100 Sobic010G269100 Sobic002G259400--Sobic010G269100 Sobic006G281500 Sobic006G281500 Sobic002G259400--Sobic006G281500 Sobic001G263000 Sobic001G263000 Sobic002G259400--Sobic001G263000 Sobic002G259400--Sobic010G085200 Sobic001G431000 Sobic001G431000 Sobic009G174000--Sobic001G431000 Sobic009G174000--Sobic005G155800 Sobic001G413200 Sobic001G413200 Sobic009G174000--Sobic001G413200 Sobic007G203300 Sobic007G203300 Sobic009G174000--Sobic007G203300 Sobic003G102600 Sobic003G102600 Sobic009G174000--Sobic003G102600 Sobic009G174000--Sobic010G230600 Sobic004G253900 Sobic004G253900 Sobic009G174000--Sobic004G253900 Sobic009G174000--Sobic006G087400 Sobic004G227300 Sobic004G227300 Sobic009G174000--Sobic004G227300 Sobic001G129400 Sobic001G129400 Sobic001G008800--Sobic001G129400 Sobic003G326900 Sobic003G326900 Sobic001G008800--Sobic003G326900 Sobic001G132900 Sobic001G132900 Sobic001G008800--Sobic001G132900 Sobic003G003000 Sobic003G003000 Sobic001G008800--Sobic003G003000 Sobic004G136500 Sobic004G136500 Sobic001G008800--Sobic004G136500 Sobic004G117800 Sobic004G117800 Sobic001G008800--Sobic004G117800 Sobic001G008800--Sobic001G144600 Sobic001G008800--Sobic006G087400 Sobic001G451901 Sobic001G451901 Sobic001G008800--Sobic001G451901 Sobic007G005500 Sobic007G005500 Sobic002G294100--Sobic007G005500 Sobic004G100200 Sobic004G100200 Sobic002G294100--Sobic004G100200 Sobic004G207900 Sobic004G207900 Sobic002G294100--Sobic004G207900 Sobic004G241900 Sobic004G241900 Sobic002G294100--Sobic004G241900 Sobic009G077600 Sobic009G077600 Sobic002G294100--Sobic009G077600 Sobic001G449900 Sobic001G449900 Sobic002G294100--Sobic001G449900 Sobic003G036500 Sobic003G036500 Sobic002G294100--Sobic003G036500 Sobic002G294100--Sobic001G431000 Sobic002G238400 Sobic002G238400 Sobic002G294100--Sobic002G238400 Sobic009G101300 Sobic009G101300 Sobic002G058700--Sobic009G101300 Sobic001G096000 Sobic001G096000 Sobic002G058700--Sobic001G096000 Sobic007G013300 Sobic007G013300 Sobic002G058700--Sobic007G013300 Sobic002G058700--Sobic001G431000 Sobic010G171100 Sobic010G171100 Sobic002G058700--Sobic010G171100 Sobic001G003500 Sobic001G003500 Sobic002G058700--Sobic001G003500 Sobic002G071000 Sobic002G071000 Sobic002G058700--Sobic002G071000 Sobic004G095300 Sobic004G095300 Sobic002G058700--Sobic004G095300 Sobic002G058700--Sobic004G117800 Sobic001G117800 Sobic001G117800 Sobic009G120500--Sobic001G117800 Sobic003G240700 Sobic003G240700 Sobic009G120500--Sobic003G240700 Sobic003G314700 Sobic003G314700 Sobic009G120500--Sobic003G314700 Sobic001G474400 Sobic001G474400 Sobic009G120500--Sobic001G474400 Sobic006G265600 Sobic006G265600 Sobic009G120500--Sobic006G265600 Sobic003G029600 Sobic003G029600 Sobic009G120500--Sobic003G029600 Sobic004G358900 Sobic004G358900 Sobic009G120500--Sobic004G358900 Sobic005G059500 Sobic005G059500 Sobic009G120500--Sobic005G059500 Sobic009G120500--Sobic001G449900 Sobic010G230600--Sobic001G428800 Sobic010G230600--Sobic001G449900 Sobic007G162100 Sobic007G162100 Sobic010G230600--Sobic007G162100 Sobic010G020400 Sobic010G020400 Sobic010G230600--Sobic010G020400 Sobic006G039400 Sobic006G039400 Sobic010G230600--Sobic006G039400 Sobic004G092500 Sobic004G092500 Sobic010G230600--Sobic004G092500 Sobic001G156900 Sobic001G156900 Sobic010G230600--Sobic001G156900 Sobic007G125000 Sobic007G125000 Sobic010G230600--Sobic007G125000 Sobic008G085700 Sobic008G085700 Sobic010G230600--Sobic008G085700
Octagon: transcription factors


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