Gene annotation
Transcriptome id Sobic.001G292900.1,Sobic.001G292900.3
Synonym Sb01g028600
Functional annotation expressed protein
UniProt C5WRF1 , C5WXR2
Pfam PF15011
Panther DB PTHR37904 PTHR37904:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G43822 : Pentatricopeptide repeat (PPR) superfamily protein
RAP-DB (Rice) LOC_Os10g41730.1 : expressed protein
MaizeGDB (Corn) Zm00025a048811
Brachypodium -
Barley -
Wheat TraesCS1D02G217400 , TraesCS1A02G214400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G021400 cysteine-rich receptor-like protein kinase 7 precursor, putative, expressed -
2 Sobic.003G433400 OsDegp14 - Putative Deg protease homologue, expressed -
3 Sobic.003G213400 expressed protein -
4 Sobic.003G163301 - -
5 Sobic.002G084800 expressed protein -
6 Sobic.009G217400 regulator of chromosome condensation, putative, expressed -
7 Sobic.002G198100 pentatricopeptide, putative, expressed -
8 Sobic.009G026300 expressed protein K17815: exonuclease V
9 Sobic.003G092800 white-brown complex homolog protein 7, putative, expressed -
10 Sobic.003G291800 hexokinase, putative, expressed K00844: hexokinase
11 Sobic.003G235100 HD domain containing protein 2, putative, expressed K07023: putative hydrolases of HD superfamily
12 Sobic.004G193300 phosphatidylinositolglycan class N family protein, expressed K05285: GPI ethanolamine phosphate transferase 1
13 Sobic.010G244900 auxin efflux carrier, putative, expressed K17964: leucine-rich PPR motif-containing protein, mitochondrial
14 Sobic.007G085700 - -
15 Sobic.008G152000 biotin--protein ligase, putative, expressed K03801: lipoyl(octanoyl) transferase
16 Sobic.003G065201 - -
17 Sobic.008G171400 phosphonate metabolism protein-related, putative, expressed -
18 Sobic.002G200000 zinc finger, C3HC4 type, putative, expressed -
19 Sobic.007G076400 expressed protein -
20 Sobic.002G069000 galactosyltransferase family protein, putative, expressed -


Gene co-expression network
sample Sobic001G292900 Sobic001G292900 Sobic008G021400 Sobic008G021400 Sobic001G292900--Sobic008G021400 Sobic003G433400 Sobic003G433400 Sobic001G292900--Sobic003G433400 Sobic003G213400 Sobic003G213400 Sobic001G292900--Sobic003G213400 Sobic003G163301 Sobic003G163301 Sobic001G292900--Sobic003G163301 Sobic002G084800 Sobic002G084800 Sobic001G292900--Sobic002G084800 Sobic009G217400 Sobic009G217400 Sobic001G292900--Sobic009G217400 Sobic002G198100 Sobic002G198100 Sobic001G292900--Sobic002G198100 Sobic009G026300 Sobic009G026300 Sobic001G292900--Sobic009G026300 Sobic003G092800 Sobic003G092800 Sobic001G292900--Sobic003G092800 Sobic010G273300 Sobic010G273300 Sobic008G021400--Sobic010G273300 Sobic008G021400--Sobic001G292900 Sobic001G340000 Sobic001G340000 Sobic008G021400--Sobic001G340000 Sobic008G044900 Sobic008G044900 Sobic008G021400--Sobic008G044900 Sobic002G031900 Sobic002G031900 Sobic008G021400--Sobic002G031900 Sobic010G121100 Sobic010G121100 Sobic008G021400--Sobic010G121100 Sobic008G021400--Sobic009G217400 Sobic005G145550 Sobic005G145550 Sobic008G021400--Sobic005G145550 Sobic001G475200 Sobic001G475200 Sobic008G021400--Sobic001G475200 Sobic006G270000 Sobic006G270000 Sobic003G433400--Sobic006G270000 Sobic003G433400--Sobic009G217400 Sobic003G010800 Sobic003G010800 Sobic003G433400--Sobic003G010800 Sobic003G291800 Sobic003G291800 Sobic003G433400--Sobic003G291800 Sobic005G048500 Sobic005G048500 Sobic003G433400--Sobic005G048500 Sobic003G235100 Sobic003G235100 Sobic003G433400--Sobic003G235100 Sobic003G433400--Sobic003G092800 Sobic002G069000 Sobic002G069000 Sobic003G433400--Sobic002G069000 Sobic003G433400--Sobic002G084800 Sobic003G213400--Sobic003G235100 Sobic003G365100 Sobic003G365100 Sobic003G213400--Sobic003G365100 Sobic008G171400 Sobic008G171400 Sobic003G213400--Sobic008G171400 Sobic002G200000 Sobic002G200000 Sobic003G213400--Sobic002G200000 Sobic007G087000 Sobic007G087000 Sobic003G213400--Sobic007G087000 Sobic003G213400--Sobic002G198100 Sobic003G213400--Sobic002G084800 Sobic006G039400 Sobic006G039400 Sobic003G213400--Sobic006G039400 Sobic001G188400 Sobic001G188400 Sobic003G213400--Sobic001G188400 Sobic003G163301--Sobic001G292900 Sobic003G163301--Sobic003G433400 Sobic003G421000 Sobic003G421000 Sobic003G163301--Sobic003G421000 Sobic008G069300 Sobic008G069300 Sobic003G163301--Sobic008G069300 Sobic003G163301--Sobic003G291800 Sobic001G539400 Sobic001G539400 Sobic003G163301--Sobic001G539400 Sobic005G226300 Sobic005G226300 Sobic003G163301--Sobic005G226300 Sobic003G065201 Sobic003G065201 Sobic003G163301--Sobic003G065201 Sobic007G226500 Sobic007G226500 Sobic003G163301--Sobic007G226500 Sobic007G076400 Sobic007G076400 Sobic002G084800--Sobic007G076400 Sobic002G084800--Sobic003G235100 Sobic006G250800 Sobic006G250800 Sobic002G084800--Sobic006G250800 Sobic007G172700 Sobic007G172700 Sobic002G084800--Sobic007G172700 Sobic002G079000 Sobic002G079000 Sobic002G084800--Sobic002G079000 Sobic002G084800--Sobic007G087000 Sobic002G084800--Sobic001G188400 Sobic008G037700 Sobic008G037700 Sobic002G084800--Sobic008G037700 Sobic009G116900 Sobic009G116900 Sobic002G084800--Sobic009G116900 Sobic007G182000 Sobic007G182000 Sobic009G217400--Sobic007G182000 Sobic009G217400--Sobic006G250800 Sobic002G307800 Sobic002G307800 Sobic009G217400--Sobic002G307800 Sobic009G217400--Sobic003G433400 Sobic009G217400--Sobic009G116900 Sobic009G217400--Sobic003G092800 Sobic001G253300 Sobic001G253300 Sobic009G217400--Sobic001G253300 Sobic001G257800 Sobic001G257800 Sobic009G217400--Sobic001G257800 Sobic002G180800 Sobic002G180800 Sobic009G217400--Sobic002G180800 Sobic002G198100--Sobic009G116900 Sobic002G198100--Sobic003G235100 Sobic006G115100 Sobic006G115100 Sobic002G198100--Sobic006G115100 Sobic007G022600 Sobic007G022600 Sobic002G198100--Sobic007G022600 Sobic001G356100 Sobic001G356100 Sobic002G198100--Sobic001G356100 Sobic002G198100--Sobic002G084800 Sobic002G198100--Sobic002G200000 Sobic002G198100--Sobic008G037700 Sobic002G198100--Sobic003G213400 Sobic008G055500 Sobic008G055500 Sobic009G026300--Sobic008G055500 Sobic009G026300--Sobic006G115100 Sobic009G026300--Sobic002G200000 Sobic009G026300--Sobic003G092800 Sobic006G060000 Sobic006G060000 Sobic009G026300--Sobic006G060000 Sobic009G026300--Sobic001G188400 Sobic009G026300--Sobic001G253300 Sobic009G026300--Sobic007G076400 Sobic008G152700 Sobic008G152700 Sobic009G026300--Sobic008G152700 Sobic003G092800--Sobic009G217400 Sobic003G092800--Sobic003G433400 Sobic003G092800--Sobic002G084800 Sobic003G092800--Sobic008G069300 Sobic003G092800--Sobic007G022600 Sobic003G092800--Sobic003G291800 Sobic003G092800--Sobic009G026300 Sobic003G092800--Sobic007G076400 Sobic003G092800--Sobic006G250800
Octagon: transcription factors


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