Gene annotation
Transcriptome id Sobic.007G146900.1
Synonym Sb07g022155
Functional annotation ARID/BRIGHT DNA-binding domain containing protein, expressed
UniProt A0A1B6PHU7
Pfam PF01388
Panther DB PTHR22970 PTHR22970:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0003677; DNA binding


Orthologs (automatic annotation)
TAIR AT3G43240 : ARID/BRIGHT DNA-binding domain-containing protein
RAP-DB (Rice) LOC_Os08g35000.1 : ARID/BRIGHT DNA-binding domain containing protein, expressed
MaizeGDB (Corn) Zm00025a005781
Brachypodium KQJ98525 , KQJ98526 , KQJ98522
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.007G146900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G353600 expressed protein -
2 Sobic.002G153700 SWP, putative, expressed K15156: MED14, mediator of RNA polymerase II transcription subunit 14
3 Sobic.002G264200 RNA recognition motif containing protein, expressed -
4 Sobic.005G207500 AAA-type ATPase family protein, putative, expressed -
5 Sobic.007G026000 ATBET9, putative, expressed -
6 Sobic.009G119000 tetratricopeptide repeat containing protein, putative, expressed K09527: DnaJ homolog subfamily C member 7
7 Sobic.007G119200 intracellular protein transport protein USO1-related, putative, expressed -
8 Sobic.008G054500 WD domain, G-beta repeat domain containing protein, expressed -
9 Sobic.003G397800 - K12823: DDX5, ATP-dependent RNA helicase DDX5/DBP2
10 Sobic.009G000500 pex14, putative, expressed K13343: peroxin-14
11 Sobic.008G153000 MATH domain containing protein, expressed -
12 Sobic.001G206100 expressed protein -
13 Sobic.006G013500 hydrolase/ zinc ion binding protein, putative, expressed K15442: TAD3, tRNA-specific adenosine deaminase 3
14 Sobic.003G119000 XRN 5\'-3\' exonuclease N-terminus domain containing protein, expressed K12619: XRN2, 5'-3' exoribonuclease 2
15 Sobic.010G065300 expressed protein K11643: CHD4, chromodomain-helicase-DNA-binding protein 4
16 Sobic.001G311500 N-acetylglucosaminyl transferase component, putative, expressed K03860: PIGQ, phosphatidylinositol N-acetylglucosaminyltransferase subunit Q
17 Sobic.004G271000 expressed protein -
18 Sobic.001G306900 tetratricopeptide repeat domain containing protein, expressed K12600: SKI3, superkiller protein 3
19 Sobic.007G167500 expressed protein -
20 Sobic.001G155000 DNA-directed RNA polymerase II subunit RPB2, putative, expressed K03010: RPB2, DNA-directed RNA polymerase II subunit RPB2


Gene co-expression network
sample Sobic007G146900 Sobic007G146900 Sobic002G353600 Sobic002G353600 Sobic007G146900--Sobic002G353600 Sobic002G153700 Sobic002G153700 Sobic007G146900--Sobic002G153700 Sobic002G264200 Sobic002G264200 Sobic007G146900--Sobic002G264200 Sobic005G207500 Sobic005G207500 Sobic007G146900--Sobic005G207500 Sobic007G026000 Sobic007G026000 Sobic007G146900--Sobic007G026000 Sobic009G119000 Sobic009G119000 Sobic007G146900--Sobic009G119000 Sobic007G119200 Sobic007G119200 Sobic007G146900--Sobic007G119200 Sobic008G054500 Sobic008G054500 Sobic007G146900--Sobic008G054500 Sobic003G397800 Sobic003G397800 Sobic007G146900--Sobic003G397800 Sobic002G353600--Sobic003G397800 Sobic002G353600--Sobic007G146900 Sobic002G297200 Sobic002G297200 Sobic002G353600--Sobic002G297200 Sobic002G353600--Sobic005G207500 Sobic002G353600--Sobic002G264200 Sobic003G059750 Sobic003G059750 Sobic002G353600--Sobic003G059750 Sobic001G206100 Sobic001G206100 Sobic002G353600--Sobic001G206100 Sobic004G257400 Sobic004G257400 Sobic002G353600--Sobic004G257400 Sobic003G445400 Sobic003G445400 Sobic002G353600--Sobic003G445400 Sobic002G071500 Sobic002G071500 Sobic002G153700--Sobic002G071500 Sobic002G153700--Sobic005G207500 Sobic008G009700 Sobic008G009700 Sobic002G153700--Sobic008G009700 Sobic010G065300 Sobic010G065300 Sobic002G153700--Sobic010G065300 Sobic002G153700--Sobic009G119000 Sobic003G307000 Sobic003G307000 Sobic002G153700--Sobic003G307000 Sobic002G153700--Sobic002G264200 Sobic010G069100 Sobic010G069100 Sobic002G153700--Sobic010G069100 Sobic001G306900 Sobic001G306900 Sobic002G153700--Sobic001G306900 Sobic002G264200--Sobic010G069100 Sobic003G416700 Sobic003G416700 Sobic002G264200--Sobic003G416700 Sobic001G461400 Sobic001G461400 Sobic002G264200--Sobic001G461400 Sobic008G153000 Sobic008G153000 Sobic002G264200--Sobic008G153000 Sobic010G236400 Sobic010G236400 Sobic002G264200--Sobic010G236400 Sobic002G264200--Sobic002G071500 Sobic007G065400 Sobic007G065400 Sobic002G264200--Sobic007G065400 Sobic002G264200--Sobic002G153700 Sobic006G118700 Sobic006G118700 Sobic002G264200--Sobic006G118700 Sobic005G207500--Sobic003G059750 Sobic005G207500--Sobic002G153700 Sobic007G103600 Sobic007G103600 Sobic005G207500--Sobic007G103600 Sobic003G119000 Sobic003G119000 Sobic005G207500--Sobic003G119000 Sobic005G207500--Sobic008G009700 Sobic005G207500--Sobic002G353600 Sobic005G207500--Sobic010G069100 Sobic005G207500--Sobic002G071500 Sobic001G026200 Sobic001G026200 Sobic005G207500--Sobic001G026200 Sobic007G026000--Sobic008G153000 Sobic006G046700 Sobic006G046700 Sobic007G026000--Sobic006G046700 Sobic005G059100 Sobic005G059100 Sobic007G026000--Sobic005G059100 Sobic007G026000--Sobic003G445400 Sobic007G026000--Sobic009G119000 Sobic007G026000--Sobic002G153700 Sobic007G026000--Sobic001G206100 Sobic006G013500 Sobic006G013500 Sobic007G026000--Sobic006G013500 Sobic004G031700 Sobic004G031700 Sobic007G026000--Sobic004G031700 Sobic009G119000--Sobic002G153700 Sobic009G119000--Sobic003G059750 Sobic009G119000--Sobic002G071500 Sobic009G119000--Sobic010G065300 Sobic009G119000--Sobic008G153000 Sobic010G275500 Sobic010G275500 Sobic009G119000--Sobic010G275500 Sobic009G119000--Sobic003G416700 Sobic004G048800 Sobic004G048800 Sobic009G119000--Sobic004G048800 Sobic001G311500 Sobic001G311500 Sobic009G119000--Sobic001G311500 Sobic002G034600 Sobic002G034600 Sobic007G119200--Sobic002G034600 Sobic004G146500 Sobic004G146500 Sobic007G119200--Sobic004G146500 Sobic007G119200--Sobic008G153000 Sobic001G109800 Sobic001G109800 Sobic007G119200--Sobic001G109800 Sobic007G041500 Sobic007G041500 Sobic007G119200--Sobic007G041500 Sobic007G119200--Sobic010G069100 Sobic007G218000 Sobic007G218000 Sobic007G119200--Sobic007G218000 Sobic007G119200--Sobic002G264200 Sobic001G088100 Sobic001G088100 Sobic007G119200--Sobic001G088100 Sobic008G173900 Sobic008G173900 Sobic008G054500--Sobic008G173900 Sobic003G200200 Sobic003G200200 Sobic008G054500--Sobic003G200200 Sobic003G268300 Sobic003G268300 Sobic008G054500--Sobic003G268300 Sobic002G248400 Sobic002G248400 Sobic008G054500--Sobic002G248400 Sobic008G078100 Sobic008G078100 Sobic008G054500--Sobic008G078100 Sobic002G157000 Sobic002G157000 Sobic008G054500--Sobic002G157000 Sobic008G054500--Sobic003G445400 Sobic007G185900 Sobic007G185900 Sobic008G054500--Sobic007G185900 Sobic008G054500--Sobic003G397800 Sobic003G397800--Sobic002G297200 Sobic001G409600 Sobic001G409600 Sobic003G397800--Sobic001G409600 Sobic003G397800--Sobic002G353600 Sobic007G167500 Sobic007G167500 Sobic003G397800--Sobic007G167500 Sobic003G397800--Sobic003G445400 Sobic003G397800--Sobic001G206100 Sobic003G397800--Sobic007G185900 Sobic010G101800 Sobic010G101800 Sobic003G397800--Sobic010G101800 Sobic003G397800--Sobic008G054500
Octagon: transcription factors


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