Gene annotation
Transcriptome id Sobic.004G319900.2,Sobic.004G319900.1
Synonym Sb04g035050
Functional annotation expressed protein
UniProt A0A194YSK6 , C5XTN6
Pfam PF01663
Panther DB PTHR23072 PTHR23072:SF0
NCBI CDD KOG2125; Glycosylphosphatidylinositol anchor synthesis protein
KEGG Orthology K05310; PIGG, ethanolamine phosphate transferase 2 subunit G
Gene Ontology GO:0003824; catalytic activity


Orthologs (automatic annotation)
TAIR AT2G22530 : Alkaline-phosphatase-like family protein
RAP-DB (Rice) LOC_Os10g08940.1 : expressed protein
MaizeGDB (Corn) Zm00025a022360
Brachypodium KQK02048 , KQK02047 , KQK02046 , KQK02045
Barley HORVU6Hr1G082070.39 , HORVU6Hr1G082070.38 , HORVU6Hr1G082070.31 , HORVU6Hr1G082070.30 , HORVU6Hr1G082070.33 , HORVU6Hr1G082070.32 , HORVU6Hr1G082070.35 , HORVU6Hr1G082070.34 , HORVU6Hr1G082070.37 , HORVU6Hr1G082070.36 , HORVU6Hr1G082070.9 , HORVU6Hr1G082070.8 , HORVU6Hr1G082070.7 , HORVU6Hr1G082070.6 , HORVU6Hr1G082070.5 , HORVU6Hr1G082070.4 , HORVU6Hr1G082070.3 , HORVU6Hr1G082070.2 , HORVU6Hr1G082070.1 , HORVU6Hr1G082070.28 , HORVU6Hr1G082070.29 , HORVU6Hr1G082070.26 , HORVU6Hr1G082070.27 , HORVU6Hr1G082070.24 , HORVU6Hr1G082070.25 , HORVU6Hr1G082070.22 , HORVU6Hr1G082070.23 , HORVU6Hr1G082070.20 , HORVU6Hr1G082070.21 , HORVU6Hr1G082070.40 , HORVU6Hr1G082070.41 , HORVU6Hr1G082070.42 , HORVU6Hr1G082070.43 , HORVU6Hr1G082070.17 , HORVU6Hr1G082070.16 , HORVU6Hr1G082070.15 , HORVU6Hr1G082070.14 , HORVU6Hr1G082070.13 , HORVU6Hr1G082070.12 , HORVU6Hr1G082070.11 , HORVU6Hr1G082070.10 , HORVU6Hr1G082070.19 , HORVU6Hr1G082070.18
Wheat TraesCS6D02G320900 , TraesCS6A02G340400 , TraesCS6B02G371600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G312100 guanine nucleotide exchange family protein, putative, expressed -
2 Sobic.006G040500 phospholipid-transporting ATPase 2, putative, expressed K01530: phospholipid-translocating ATPase
3 Sobic.010G148932 - -
4 Sobic.003G072200 zinc finger protein, putative, expressed K11978: E3 ubiquitin-protein ligase UBR3
5 Sobic.002G397500 SAC3/GANP family protein, expressed -
6 Sobic.008G088872 - -
7 Sobic.007G062800 SET domain containing protein, expressed -
8 Sobic.003G186000 WD domain, G-beta repeat domain containing protein, expressed -
9 Sobic.004G005100 peptidase family C78 domain containing protein, expressed -
10 Sobic.008G098300 ubiquitin carboxyl-terminal hydrolase 26, putative, expressed K11858: ubiquitin carboxyl-terminal hydrolase 48
11 Sobic.004G276400 expressed protein K11320: E1A-binding protein p400
12 Sobic.002G042600 ubiquitin carboxyl-terminal hydrolase, putative, expressed K11838: USP7, ubiquitin carboxyl-terminal hydrolase 7
13 Sobic.007G098500 BIG, putative, expressed K10691: UBR4, E3 ubiquitin-protein ligase UBR4
14 Sobic.004G135400 expressed protein -
15 Sobic.002G396500 FAT domain-containing protein, putative, expressed K08874: transformation/transcription domain-associated protein
16 Sobic.005G028600 zinc finger, C3HC4 type domain containing protein, expressed -
17 Sobic.005G001000 RNA recognition motif containing protein, putative, expressed K10643: CNOT4, NOT4, CCR4-NOT transcription complex subunit 4
18 Sobic.003G229500 ZOS12-01 - C2H2 zinc finger protein, expressed -
19 Sobic.001G191700 expressed protein -
20 Sobic.008G098900 ubiquitin carboxyl-terminal hydrolase, putative, expressed K11838: USP7, ubiquitin carboxyl-terminal hydrolase 7


Gene co-expression network
sample Sobic004G319900 Sobic004G319900 Sobic003G312100 Sobic003G312100 Sobic004G319900--Sobic003G312100 Sobic006G040500 Sobic006G040500 Sobic004G319900--Sobic006G040500 Sobic010G148932 Sobic010G148932 Sobic004G319900--Sobic010G148932 Sobic003G072200 Sobic003G072200 Sobic004G319900--Sobic003G072200 Sobic002G397500 Sobic002G397500 Sobic004G319900--Sobic002G397500 Sobic008G088872 Sobic008G088872 Sobic004G319900--Sobic008G088872 Sobic007G062800 Sobic007G062800 Sobic004G319900--Sobic007G062800 Sobic003G186000 Sobic003G186000 Sobic004G319900--Sobic003G186000 Sobic004G005100 Sobic004G005100 Sobic004G319900--Sobic004G005100 Sobic003G312100--Sobic010G148932 Sobic003G233400 Sobic003G233400 Sobic003G312100--Sobic003G233400 Sobic001G137000 Sobic001G137000 Sobic003G312100--Sobic001G137000 Sobic007G019300 Sobic007G019300 Sobic003G312100--Sobic007G019300 Sobic003G312100--Sobic003G072200 Sobic003G312100--Sobic002G397500 Sobic001G004400 Sobic001G004400 Sobic003G312100--Sobic001G004400 Sobic004G248600 Sobic004G248600 Sobic003G312100--Sobic004G248600 Sobic002G396500 Sobic002G396500 Sobic003G312100--Sobic002G396500 Sobic006G040500--Sobic003G186000 Sobic005G001000 Sobic005G001000 Sobic006G040500--Sobic005G001000 Sobic006G040500--Sobic007G062800 Sobic005G112300 Sobic005G112300 Sobic006G040500--Sobic005G112300 Sobic010G010700 Sobic010G010700 Sobic006G040500--Sobic010G010700 Sobic002G008900 Sobic002G008900 Sobic006G040500--Sobic002G008900 Sobic009G256400 Sobic009G256400 Sobic006G040500--Sobic009G256400 Sobic010G123600 Sobic010G123600 Sobic006G040500--Sobic010G123600 Sobic004G276400 Sobic004G276400 Sobic006G040500--Sobic004G276400 Sobic010G148932--Sobic003G312100 Sobic002G042600 Sobic002G042600 Sobic010G148932--Sobic002G042600 Sobic003G229500 Sobic003G229500 Sobic010G148932--Sobic003G229500 Sobic010G148932--Sobic002G397500 Sobic008G098900 Sobic008G098900 Sobic010G148932--Sobic008G098900 Sobic001G117200 Sobic001G117200 Sobic010G148932--Sobic001G117200 Sobic010G148932--Sobic001G137000 Sobic010G148932--Sobic007G062800 Sobic001G457900 Sobic001G457900 Sobic010G148932--Sobic001G457900 Sobic003G072200--Sobic002G397500 Sobic007G098500 Sobic007G098500 Sobic003G072200--Sobic007G098500 Sobic003G072200--Sobic007G062800 Sobic003G072200--Sobic003G233400 Sobic009G084900 Sobic009G084900 Sobic003G072200--Sobic009G084900 Sobic003G072200--Sobic008G098900 Sobic003G072200--Sobic005G112300 Sobic001G347500 Sobic001G347500 Sobic003G072200--Sobic001G347500 Sobic002G133300 Sobic002G133300 Sobic003G072200--Sobic002G133300 Sobic003G408600 Sobic003G408600 Sobic002G397500--Sobic003G408600 Sobic002G397500--Sobic007G062800 Sobic002G397500--Sobic005G112300 Sobic001G540400 Sobic001G540400 Sobic002G397500--Sobic001G540400 Sobic009G109200 Sobic009G109200 Sobic002G397500--Sobic009G109200 Sobic002G397500--Sobic003G072200 Sobic004G242400 Sobic004G242400 Sobic002G397500--Sobic004G242400 Sobic002G397500--Sobic004G276400 Sobic010G112100 Sobic010G112100 Sobic002G397500--Sobic010G112100 Sobic005G162500 Sobic005G162500 Sobic008G088872--Sobic005G162500 Sobic001G370900 Sobic001G370900 Sobic008G088872--Sobic001G370900 Sobic009G131300 Sobic009G131300 Sobic008G088872--Sobic009G131300 Sobic006G184900 Sobic006G184900 Sobic008G088872--Sobic006G184900 Sobic005G062200 Sobic005G062200 Sobic008G088872--Sobic005G062200 Sobic001G263600 Sobic001G263600 Sobic008G088872--Sobic001G263600 Sobic008G088872--Sobic002G042600 Sobic002G429300 Sobic002G429300 Sobic008G088872--Sobic002G429300 Sobic002G335600 Sobic002G335600 Sobic008G088872--Sobic002G335600 Sobic007G062800--Sobic001G540400 Sobic007G062800--Sobic005G112300 Sobic002G405800 Sobic002G405800 Sobic007G062800--Sobic002G405800 Sobic007G062800--Sobic002G008900 Sobic007G062800--Sobic010G010700 Sobic007G062800--Sobic004G242400 Sobic004G034900 Sobic004G034900 Sobic007G062800--Sobic004G034900 Sobic007G062800--Sobic004G276400 Sobic007G062800--Sobic002G397500 Sobic003G186000--Sobic004G276400 Sobic010G105200 Sobic010G105200 Sobic003G186000--Sobic010G105200 Sobic003G186000--Sobic010G010700 Sobic003G186000--Sobic005G001000 Sobic003G205200 Sobic003G205200 Sobic003G186000--Sobic003G205200 Sobic001G194200 Sobic001G194200 Sobic003G186000--Sobic001G194200 Sobic003G186000--Sobic007G062800 Sobic008G001200 Sobic008G001200 Sobic003G186000--Sobic008G001200 Sobic007G103100 Sobic007G103100 Sobic003G186000--Sobic007G103100 Sobic004G005100--Sobic003G312100 Sobic010G080700 Sobic010G080700 Sobic004G005100--Sobic010G080700 Sobic001G291000 Sobic001G291000 Sobic004G005100--Sobic001G291000 Sobic004G005100--Sobic006G040500 Sobic004G005100--Sobic008G088872 Sobic004G005100--Sobic010G148932 Sobic004G135400 Sobic004G135400 Sobic004G005100--Sobic004G135400 Sobic010G034000 Sobic010G034000 Sobic004G005100--Sobic010G034000 Sobic004G005100--Sobic004G248600
Octagon: transcription factors


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