Gene annotation
Transcriptome id Sobic.003G171400.2,Sobic.003G171400.1
Synonym Sb03g019750
Functional annotation HEAT repeat family protein, putative, expressed
UniProt C5XLD8 , A0A1W0VXQ4
Pfam -
Panther DB PTHR32059 PTHR32059:SF0
NCBI CDD KOG0211; Protein phosphatase 2A regulatory subunit A and related proteins
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G16210 : HEAT repeat-containing protein
RAP-DB (Rice) LOC_Os01g33060.1 : HEAT repeat family protein, putative, expressed
MaizeGDB (Corn) Zm00025a036374
Brachypodium KQK04483 , KQK04484
Barley HORVU3Hr1G043640.18 , HORVU3Hr1G043640.19 , HORVU3Hr1G043640.10 , HORVU3Hr1G043640.11 , HORVU3Hr1G043640.12 , HORVU3Hr1G043640.13 , HORVU3Hr1G043640.14 , HORVU3Hr1G043640.15 , HORVU3Hr1G043640.16 , HORVU3Hr1G043640.17 , HORVU3Hr1G043640.29 , HORVU3Hr1G043640.28 , HORVU3Hr1G043640.25 , HORVU3Hr1G043640.24 , HORVU3Hr1G043640.26 , HORVU3Hr1G043640.21 , HORVU3Hr1G043640.20 , HORVU3Hr1G043640.23 , HORVU3Hr1G043640.22 , HORVU3Hr1G043640.30 , HORVU3Hr1G043640.31 , HORVU2Hr1G061110.1 , HORVU3Hr1G043640.27 , HORVU3Hr1G043640.8 , HORVU3Hr1G043640.9 , HORVU3Hr1G043640.2 , HORVU3Hr1G043640.3 , HORVU3Hr1G043640.1 , HORVU3Hr1G043640.6 , HORVU3Hr1G043640.7 , HORVU3Hr1G043640.4 , HORVU3Hr1G043640.5
Wheat TraesCS3A02G198700 , TraesCS3A02G198700 , TraesCS3A02G198700 , TraesCS3D02G196800 , TraesCS3B02G228000 , TraesCS3B02G228000 , TraesCS3D02G196800 , TraesCS3D02G196800 , TraesCS3D02G196800 , TraesCS3D02G196800 , TraesCS3D02G196800 , TraesCS3D02G196800 , TraesCS3D02G196800 , TraesCS3D02G196800 , TraesCS3D02G196800
Populus -


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cDNA sequences
Sobic.003G171400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G040500 expressed protein -
2 Sobic.003G221400 tetratricopeptide repeat domain containing protein, expressed K00670: NAA30, N-alpha-acetyltransferase 30
3 Sobic.002G147600 ubiquitin-protein ligase 1, putative, expressed K10592: HUWE1, MULE, E3 ubiquitin-protein ligase HUWE1
4 Sobic.001G255800 CPuORF15 - conserved peptide uORF-containing transcript, expressed -
5 Sobic.002G401500 WD domain, G-beta repeat domain containing protein, expressed K14005: protein transport protein SEC31
6 Sobic.002G179400 DNA binding protein, putative, expressed -
7 Sobic.001G493700 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed -
8 Sobic.002G335600 eukaryotic translation initiation factor 4G, putative, expressed K03260: translation initiation factor 4G
9 Sobic.008G085300 hhH-GPD superfamily base excision DNA repair protein, expressed -
10 Sobic.008G092600 ubiquitin-protein ligase 1, putative, expressed K10592: HUWE1, MULE, E3 ubiquitin-protein ligase HUWE1
11 Sobic.001G004400 - K14290: XPO1, exportin-1
12 Sobic.001G110600 HEAT repeat family protein, putative, expressed -
13 Sobic.008G098900 ubiquitin carboxyl-terminal hydrolase, putative, expressed K11838: USP7, ubiquitin carboxyl-terminal hydrolase 7
14 Sobic.008G124800 expressed protein -
15 Sobic.001G333100 U-box domain-containing protein, putative, expressed K10597: UBE4B, ubiquitin conjugation factor E4 B
16 Sobic.004G053500 HEAT repeat family protein, putative, expressed K17263: CAND1, cullin-associated NEDD8-dissociated protein 1
17 Sobic.007G054800 valyl-tRNA synthetase, putative, expressed K01873: VARS, valyl-tRNA synthetase
18 Sobic.001G404600 expressed protein K18270: Rab3 GTPase-activating protein catalytic subunit
19 Sobic.002G042600 ubiquitin carboxyl-terminal hydrolase, putative, expressed K11838: USP7, ubiquitin carboxyl-terminal hydrolase 7
20 Sobic.001G301200 pattern formation protein EMB30, putative, expressed K18443: golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1


Gene co-expression network
sample Sobic003G171400 Sobic003G171400 Sobic004G040500 Sobic004G040500 Sobic003G171400--Sobic004G040500 Sobic003G221400 Sobic003G221400 Sobic003G171400--Sobic003G221400 Sobic002G147600 Sobic002G147600 Sobic003G171400--Sobic002G147600 Sobic001G255800 Sobic001G255800 Sobic003G171400--Sobic001G255800 Sobic002G401500 Sobic002G401500 Sobic003G171400--Sobic002G401500 Sobic002G179400 Sobic002G179400 Sobic003G171400--Sobic002G179400 Sobic001G493700 Sobic001G493700 Sobic003G171400--Sobic001G493700 Sobic002G335600 Sobic002G335600 Sobic003G171400--Sobic002G335600 Sobic008G085300 Sobic008G085300 Sobic003G171400--Sobic008G085300 Sobic008G092600 Sobic008G092600 Sobic004G040500--Sobic008G092600 Sobic004G040500--Sobic002G147600 Sobic004G040500--Sobic002G335600 Sobic004G040500--Sobic001G493700 Sobic003G072200 Sobic003G072200 Sobic004G040500--Sobic003G072200 Sobic003G233400 Sobic003G233400 Sobic004G040500--Sobic003G233400 Sobic004G023100 Sobic004G023100 Sobic004G040500--Sobic004G023100 Sobic001G287500 Sobic001G287500 Sobic004G040500--Sobic001G287500 Sobic004G040500--Sobic003G171400 Sobic007G054800 Sobic007G054800 Sobic003G221400--Sobic007G054800 Sobic005G162500 Sobic005G162500 Sobic003G221400--Sobic005G162500 Sobic003G221400--Sobic001G493700 Sobic001G110600 Sobic001G110600 Sobic003G221400--Sobic001G110600 Sobic001G004400 Sobic001G004400 Sobic003G221400--Sobic001G004400 Sobic001G333100 Sobic001G333100 Sobic003G221400--Sobic001G333100 Sobic003G221400--Sobic002G179400 Sobic001G192000 Sobic001G192000 Sobic003G221400--Sobic001G192000 Sobic003G221400--Sobic008G085300 Sobic002G147600--Sobic008G092600 Sobic008G098900 Sobic008G098900 Sobic002G147600--Sobic008G098900 Sobic002G147600--Sobic004G040500 Sobic002G147600--Sobic008G085300 Sobic002G146300 Sobic002G146300 Sobic002G147600--Sobic002G146300 Sobic002G147600--Sobic002G335600 Sobic007G133700 Sobic007G133700 Sobic002G147600--Sobic007G133700 Sobic003G205200 Sobic003G205200 Sobic002G147600--Sobic003G205200 Sobic001G370900 Sobic001G370900 Sobic002G147600--Sobic001G370900 Sobic003G039000 Sobic003G039000 Sobic001G255800--Sobic003G039000 Sobic001G065100 Sobic001G065100 Sobic001G255800--Sobic001G065100 Sobic004G053500 Sobic004G053500 Sobic001G255800--Sobic004G053500 Sobic001G255800--Sobic002G401500 Sobic003G296900 Sobic003G296900 Sobic001G255800--Sobic003G296900 Sobic005G062200 Sobic005G062200 Sobic001G255800--Sobic005G062200 Sobic008G088872 Sobic008G088872 Sobic001G255800--Sobic008G088872 Sobic001G263600 Sobic001G263600 Sobic001G255800--Sobic001G263600 Sobic001G255800--Sobic003G171400 Sobic004G322400 Sobic004G322400 Sobic002G401500--Sobic004G322400 Sobic009G131300 Sobic009G131300 Sobic002G401500--Sobic009G131300 Sobic002G042600 Sobic002G042600 Sobic002G401500--Sobic002G042600 Sobic002G401500--Sobic004G053500 Sobic002G401500--Sobic005G062200 Sobic002G429300 Sobic002G429300 Sobic002G401500--Sobic002G429300 Sobic002G401500--Sobic001G065100 Sobic002G401500--Sobic008G088872 Sobic002G401500--Sobic001G263600 Sobic002G179400--Sobic001G493700 Sobic002G179400--Sobic002G042600 Sobic002G179400--Sobic004G053500 Sobic002G179400--Sobic002G429300 Sobic006G184900 Sobic006G184900 Sobic002G179400--Sobic006G184900 Sobic002G179400--Sobic003G233400 Sobic002G133300 Sobic002G133300 Sobic002G179400--Sobic002G133300 Sobic002G179400--Sobic001G065100 Sobic002G179400--Sobic004G322400 Sobic001G493700--Sobic002G179400 Sobic001G493700--Sobic005G162500 Sobic001G493700--Sobic006G184900 Sobic001G493700--Sobic002G133300 Sobic001G493700--Sobic009G131300 Sobic001G493700--Sobic002G429300 Sobic001G493700--Sobic002G042600 Sobic001G493700--Sobic002G335600 Sobic006G088200 Sobic006G088200 Sobic001G493700--Sobic006G088200 Sobic002G335600--Sobic006G184900 Sobic002G335600--Sobic005G162500 Sobic006G032300 Sobic006G032300 Sobic002G335600--Sobic006G032300 Sobic002G335600--Sobic009G131300 Sobic002G335600--Sobic002G429300 Sobic002G335600--Sobic001G493700 Sobic002G335600--Sobic008G088872 Sobic002G335600--Sobic004G040500 Sobic002G335600--Sobic004G053500 Sobic008G085300--Sobic008G098900 Sobic001G542500 Sobic001G542500 Sobic008G085300--Sobic001G542500 Sobic008G085300--Sobic005G162500 Sobic004G276400 Sobic004G276400 Sobic008G085300--Sobic004G276400 Sobic008G085300--Sobic008G092600 Sobic008G085300--Sobic002G147600 Sobic003G186000 Sobic003G186000 Sobic008G085300--Sobic003G186000 Sobic008G085300--Sobic001G370900 Sobic004G291900 Sobic004G291900 Sobic008G085300--Sobic004G291900
Octagon: transcription factors


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