Gene annotation
Transcriptome id Sobic.009G176700.1
Synonym Sb09g023710
Functional annotation expressed protein
UniProt C5YZV4
Pfam -
Panther DB PTHR31789 PTHR31789:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G54190 : Transducin/WD40 repeat-like superfamily protein
RAP-DB (Rice) LOC_Os05g40410.1 : expressed protein
MaizeGDB (Corn) Zm00025a037800 , Zm00025a044035
Brachypodium PNT73110 , PNT73111 , KQK05707 , KQK05706
Barley HORVU1Hr1G069210.7 , HORVU1Hr1G069210.6 , HORVU1Hr1G069210.5 , HORVU1Hr1G069210.4 , HORVU1Hr1G069210.3 , HORVU1Hr1G069210.2 , HORVU1Hr1G069210.1 , HORVU1Hr1G069210.9 , HORVU1Hr1G069210.8
Wheat TraesCS3B02G373200 , TraesCS3B02G373200 , TraesCS1D02G302800 , TraesCS3A02G341100 , TraesCS1B02G313700 , TraesCS1A02G303300 , TraesCS3D02G334700
Populus PNS99564


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G405500 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11841: USP10, ubiquitin carboxyl-terminal hydrolase 10
2 Sobic.003G039000 GPI transamidase component Gpi16 subunit family protein, putative, expressed K05292: GPI-anchor transamidase subunit T
3 Sobic.009G003700 PINHEAD, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C
4 Sobic.008G092800 expressed protein -
5 Sobic.001G467100 SURF1, putative, expressed K14998: SURF1, surfeit locus 1 family protein
6 Sobic.006G056200 transport protein particle component, Bet3, domain containing protein, expressed -
7 Sobic.001G488100 OsNucAP1 - Putative Nucleoporin Autopeptidase homologue, expressed K14297: NUP98, ADAR2, nuclear pore complex protein Nup98-Nup96
8 Sobic.001G143600 pattern formation protein EMB30, putative, expressed K18443: golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
9 Sobic.001G536000 actin, putative, expressed K11340: ACTL6A, actin-like protein 6A
10 Sobic.004G135200 expressed protein -
11 Sobic.001G248100 histone acetyltransferase GCN5, putative, expressed K06062: PCAF, KAT2, histone acetyltransferase
12 Sobic.001G437400 guanine nucleotide exchange family protein, putative, expressed K18442: ARFGEF, brefeldin A-inhibited guanine nucleotide-exchange protein
13 Sobic.005G163700 T-complex protein, putative, expressed K09500: T-complex protein 1 subunit theta
14 Sobic.004G223300 ARF GTPase-activating domain-containing protein, putative, expressed K12489: Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
15 Sobic.002G150800 WD domain, G-beta repeat domain containing protein, expressed K16547: protein NEDD1
16 Sobic.002G051800 BTBT2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with tetratricopeptide repeats, expressed -
17 Sobic.007G145400 expressed protein -
18 Sobic.004G343200 dehydrogenase, putative, expressed K00121: frmA, ADH5, S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase
19 Sobic.001G117800 coatomer alpha subunit, putative, expressed K05236: COPA, coatomer subunit alpha
20 Sobic.001G382600 expressed protein -


Gene co-expression network
sample Sobic009G176700 Sobic009G176700 Sobic002G405500 Sobic002G405500 Sobic009G176700--Sobic002G405500 Sobic003G039000 Sobic003G039000 Sobic009G176700--Sobic003G039000 Sobic009G003700 Sobic009G003700 Sobic009G176700--Sobic009G003700 Sobic008G092800 Sobic008G092800 Sobic009G176700--Sobic008G092800 Sobic001G467100 Sobic001G467100 Sobic009G176700--Sobic001G467100 Sobic006G056200 Sobic006G056200 Sobic009G176700--Sobic006G056200 Sobic001G488100 Sobic001G488100 Sobic009G176700--Sobic001G488100 Sobic001G143600 Sobic001G143600 Sobic009G176700--Sobic001G143600 Sobic001G536000 Sobic001G536000 Sobic009G176700--Sobic001G536000 Sobic006G080400 Sobic006G080400 Sobic002G405500--Sobic006G080400 Sobic007G077900 Sobic007G077900 Sobic002G405500--Sobic007G077900 Sobic010G219000 Sobic010G219000 Sobic002G405500--Sobic010G219000 Sobic007G019300 Sobic007G019300 Sobic002G405500--Sobic007G019300 Sobic004G155600 Sobic004G155600 Sobic002G405500--Sobic004G155600 Sobic004G223300 Sobic004G223300 Sobic002G405500--Sobic004G223300 Sobic002G405500--Sobic001G536000 Sobic010G228500 Sobic010G228500 Sobic002G405500--Sobic010G228500 Sobic001G453000 Sobic001G453000 Sobic002G405500--Sobic001G453000 Sobic001G255800 Sobic001G255800 Sobic003G039000--Sobic001G255800 Sobic001G065100 Sobic001G065100 Sobic003G039000--Sobic001G065100 Sobic004G131300 Sobic004G131300 Sobic003G039000--Sobic004G131300 Sobic003G146600 Sobic003G146600 Sobic003G039000--Sobic003G146600 Sobic003G375200 Sobic003G375200 Sobic003G039000--Sobic003G375200 Sobic003G039000--Sobic004G223300 Sobic010G080700 Sobic010G080700 Sobic003G039000--Sobic010G080700 Sobic005G062200 Sobic005G062200 Sobic003G039000--Sobic005G062200 Sobic002G179400 Sobic002G179400 Sobic003G039000--Sobic002G179400 Sobic007G145400 Sobic007G145400 Sobic009G003700--Sobic007G145400 Sobic003G050900 Sobic003G050900 Sobic009G003700--Sobic003G050900 Sobic001G248100 Sobic001G248100 Sobic009G003700--Sobic001G248100 Sobic001G097500 Sobic001G097500 Sobic009G003700--Sobic001G097500 Sobic001G118200 Sobic001G118200 Sobic009G003700--Sobic001G118200 Sobic005G110499 Sobic005G110499 Sobic009G003700--Sobic005G110499 Sobic004G053500 Sobic004G053500 Sobic009G003700--Sobic004G053500 Sobic004G147500 Sobic004G147500 Sobic009G003700--Sobic004G147500 Sobic002G340900 Sobic002G340900 Sobic009G003700--Sobic002G340900 Sobic003G143800 Sobic003G143800 Sobic008G092800--Sobic003G143800 Sobic008G092800--Sobic007G145400 Sobic003G016500 Sobic003G016500 Sobic008G092800--Sobic003G016500 Sobic008G092800--Sobic001G248100 Sobic010G262100 Sobic010G262100 Sobic008G092800--Sobic010G262100 Sobic001G437400 Sobic001G437400 Sobic008G092800--Sobic001G437400 Sobic007G047600 Sobic007G047600 Sobic008G092800--Sobic007G047600 Sobic006G181800 Sobic006G181800 Sobic008G092800--Sobic006G181800 Sobic002G371600 Sobic002G371600 Sobic008G092800--Sobic002G371600 Sobic004G208500 Sobic004G208500 Sobic001G467100--Sobic004G208500 Sobic010G172400 Sobic010G172400 Sobic001G467100--Sobic010G172400 Sobic001G474400 Sobic001G474400 Sobic001G467100--Sobic001G474400 Sobic001G099900 Sobic001G099900 Sobic001G467100--Sobic001G099900 Sobic003G222700 Sobic003G222700 Sobic001G467100--Sobic003G222700 Sobic001G467100--Sobic007G145400 Sobic005G114500 Sobic005G114500 Sobic001G467100--Sobic005G114500 Sobic001G161700 Sobic001G161700 Sobic001G467100--Sobic001G161700 Sobic001G467100--Sobic005G110499 Sobic004G039600 Sobic004G039600 Sobic006G056200--Sobic004G039600 Sobic008G055900 Sobic008G055900 Sobic006G056200--Sobic008G055900 Sobic008G129600 Sobic008G129600 Sobic006G056200--Sobic008G129600 Sobic003G099300 Sobic003G099300 Sobic006G056200--Sobic003G099300 Sobic009G226400 Sobic009G226400 Sobic006G056200--Sobic009G226400 Sobic008G103300 Sobic008G103300 Sobic006G056200--Sobic008G103300 Sobic001G369000 Sobic001G369000 Sobic006G056200--Sobic001G369000 SobicK004100 SobicK004100 Sobic006G056200--SobicK004100 Sobic002G029300 Sobic002G029300 Sobic006G056200--Sobic002G029300 Sobic004G315500 Sobic004G315500 Sobic001G488100--Sobic004G315500 Sobic006G137700 Sobic006G137700 Sobic001G488100--Sobic006G137700 Sobic001G488100--Sobic002G405500 Sobic009G234700 Sobic009G234700 Sobic001G488100--Sobic009G234700 Sobic010G188000 Sobic010G188000 Sobic001G488100--Sobic010G188000 Sobic006G002800 Sobic006G002800 Sobic001G488100--Sobic006G002800 Sobic001G373000 Sobic001G373000 Sobic001G488100--Sobic001G373000 Sobic009G134900 Sobic009G134900 Sobic001G488100--Sobic009G134900 Sobic008G160000 Sobic008G160000 Sobic001G488100--Sobic008G160000 Sobic001G385400 Sobic001G385400 Sobic001G143600--Sobic001G385400 Sobic009G049200 Sobic009G049200 Sobic001G143600--Sobic009G049200 Sobic002G219900 Sobic002G219900 Sobic001G143600--Sobic002G219900 Sobic003G250900 Sobic003G250900 Sobic001G143600--Sobic003G250900 Sobic003G435500 Sobic003G435500 Sobic001G143600--Sobic003G435500 Sobic006G242500 Sobic006G242500 Sobic001G143600--Sobic006G242500 Sobic010G065800 Sobic010G065800 Sobic001G143600--Sobic010G065800 Sobic006G236000 Sobic006G236000 Sobic001G143600--Sobic006G236000 Sobic001G507200 Sobic001G507200 Sobic001G143600--Sobic001G507200 Sobic004G034700 Sobic004G034700 Sobic001G536000--Sobic004G034700 Sobic009G142000 Sobic009G142000 Sobic001G536000--Sobic009G142000 Sobic001G536000--Sobic002G405500 Sobic001G451300 Sobic001G451300 Sobic001G536000--Sobic001G451300 Sobic001G239800 Sobic001G239800 Sobic001G536000--Sobic001G239800 Sobic001G536000--Sobic001G453000 Sobic001G536000--Sobic003G375200 Sobic006G112700 Sobic006G112700 Sobic001G536000--Sobic006G112700 Sobic003G294600 Sobic003G294600 Sobic001G536000--Sobic003G294600
Octagon: transcription factors


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