Gene annotation
Transcriptome id Sobic.004G268300.1,Sobic.004G268300.2
Synonym Sb04g030620
Functional annotation phosphatase, putative, expressed
UniProt C5Y0C2
Pfam PF01569
Panther DB PTHR11247 PTHR11247:SF25
NCBI CDD KOG3146; Dolichyl pyrophosphate phosphatase and related acid phosphatases
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G66450 : Phosphatidic acid phosphatase (PAP2) family protein
RAP-DB (Rice) LOC_Os02g47570.1 : phosphatase, putative, expressed
MaizeGDB (Corn) Zm00025a032440 , Zm00025a021711
Brachypodium KQK00928
Barley HORVU6Hr1G068790.2 , HORVU6Hr1G068790.3 , HORVU6Hr1G068790.1 , HORVU6Hr1G068790.6 , HORVU6Hr1G068790.7 , HORVU6Hr1G068790.4 , HORVU6Hr1G068790.5
Wheat TraesCS6A02G271800 , TraesCS6B02G299500 , TraesCS6B02G299400 , TraesCS6D02G252100 , TraesCS6A02G271900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G052900 CBS domain-containing protein, putative, expressed -
2 Sobic.002G206300 tsi1-interacting protein TSIP1, putative, expressed -
3 Sobic.009G219100 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@"serine/threonine-protein kinase SNT7, chloroplast precursor"("PubMedID : 26759170,PubMedID : 24597475")@serine/threonine-protein kinase SNT7, chloroplast precursor, putative, expressed -
4 Sobic.004G151500 AP2 domain containing protein, expressed -
5 Sobic.002G402700 -(PubMedID : 26976818)@ferredoxin-dependent glutamate synthase, chloroplast precursor, putative, expressed K00284: GLU, glutamate synthase (ferredoxin)
6 Sobic.008G074000 OsSCP65 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I
7 Sobic.003G306600 acetamidase, putative, expressed K01455: formamidase
8 Sobic.001G504400 expressed protein -
9 Sobic.001G540600 expressed protein -
10 Sobic.009G207900 expressed protein -
11 Sobic.001G521200 expressed protein -
12 Sobic.009G123900 L1P family of ribosomal proteins domain containing protein, expressed K02863: RP-L1, MRPL1, large subunit ribosomal protein L1
13 Sobic.003G345500 ureidoglycolate hydrolase, putative, expressed -
14 Sobic.009G062400 uvrB/uvrC motif family protein, expressed -
15 Sobic.004G179400 ferrochelatase 2(PubMedID : 26465154)@ferrochelatase-2, chloroplast precursor, putative, expressed K01772: hemH, protoporphyrin/coproporphyrin ferrochelatase
16 Sobic.006G212800 expressed protein -
17 Sobic.008G077500 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed -
18 Sobic.003G287900 phenylalanyl-tRNA synthetase, putative, expressed K01889: FARSA, phenylalanyl-tRNA synthetase alpha chain
19 Sobic.003G233700 SET domain-containing protein, putative, expressed -
20 Sobic.004G019800 MATE domain containing protein, expressed -


Gene co-expression network
sample Sobic004G268300 Sobic004G268300 Sobic008G052900 Sobic008G052900 Sobic004G268300--Sobic008G052900 Sobic002G206300 Sobic002G206300 Sobic004G268300--Sobic002G206300 Sobic009G219100 Sobic009G219100 Sobic004G268300--Sobic009G219100 Sobic004G151500 Sobic004G151500 Sobic004G268300--Sobic004G151500 Sobic002G402700 Sobic002G402700 Sobic004G268300--Sobic002G402700 Sobic008G074000 Sobic008G074000 Sobic004G268300--Sobic008G074000 Sobic003G306600 Sobic003G306600 Sobic004G268300--Sobic003G306600 Sobic001G504400 Sobic001G504400 Sobic004G268300--Sobic001G504400 Sobic001G540600 Sobic001G540600 Sobic004G268300--Sobic001G540600 Sobic008G052900--Sobic009G219100 Sobic008G052900--Sobic004G268300 Sobic008G052900--Sobic002G206300 Sobic009G207900 Sobic009G207900 Sobic008G052900--Sobic009G207900 Sobic009G038701 Sobic009G038701 Sobic008G052900--Sobic009G038701 Sobic001G180200 Sobic001G180200 Sobic008G052900--Sobic001G180200 Sobic010G067100 Sobic010G067100 Sobic008G052900--Sobic010G067100 Sobic008G052900--Sobic001G504400 Sobic006G212800 Sobic006G212800 Sobic008G052900--Sobic006G212800 Sobic002G206300--Sobic009G038701 Sobic002G206300--Sobic001G504400 Sobic002G206300--Sobic001G180200 Sobic001G536700 Sobic001G536700 Sobic002G206300--Sobic001G536700 Sobic002G206300--Sobic009G207900 Sobic001G258200 Sobic001G258200 Sobic002G206300--Sobic001G258200 Sobic008G129900 Sobic008G129900 Sobic002G206300--Sobic008G129900 Sobic001G217900 Sobic001G217900 Sobic002G206300--Sobic001G217900 Sobic003G341300 Sobic003G341300 Sobic002G206300--Sobic003G341300 Sobic004G154400 Sobic004G154400 Sobic009G219100--Sobic004G154400 Sobic009G219100--Sobic009G207900 Sobic009G062400 Sobic009G062400 Sobic009G219100--Sobic009G062400 Sobic009G237000 Sobic009G237000 Sobic009G219100--Sobic009G237000 Sobic009G219100--Sobic008G074000 Sobic009G219100--Sobic001G504400 Sobic009G093100 Sobic009G093100 Sobic009G219100--Sobic009G093100 Sobic009G219100--Sobic002G206300 Sobic005G179300 Sobic005G179300 Sobic009G219100--Sobic005G179300 Sobic004G298900 Sobic004G298900 Sobic004G151500--Sobic004G298900 Sobic004G151500--Sobic004G268300 Sobic003G014300 Sobic003G014300 Sobic004G151500--Sobic003G014300 Sobic003G037300 Sobic003G037300 Sobic004G151500--Sobic003G037300 Sobic004G151500--Sobic008G052900 Sobic004G151500--Sobic009G062400 Sobic006G258700 Sobic006G258700 Sobic004G151500--Sobic006G258700 Sobic006G260800 Sobic006G260800 Sobic004G151500--Sobic006G260800 Sobic001G183000 Sobic001G183000 Sobic004G151500--Sobic001G183000 Sobic008G033000 Sobic008G033000 Sobic002G402700--Sobic008G033000 Sobic002G402700--Sobic008G129900 Sobic002G402700--Sobic001G217900 Sobic002G402700--Sobic002G206300 Sobic002G402700--Sobic001G504400 Sobic005G001700 Sobic005G001700 Sobic002G402700--Sobic005G001700 Sobic002G402700--Sobic001G540600 Sobic010G231300 Sobic010G231300 Sobic002G402700--Sobic010G231300 Sobic001G378100 Sobic001G378100 Sobic002G402700--Sobic001G378100 Sobic003G070900 Sobic003G070900 Sobic008G074000--Sobic003G070900 Sobic007G103400 Sobic007G103400 Sobic008G074000--Sobic007G103400 Sobic002G133900 Sobic002G133900 Sobic008G074000--Sobic002G133900 Sobic003G233700 Sobic003G233700 Sobic008G074000--Sobic003G233700 Sobic008G074000--Sobic009G237000 Sobic008G074000--Sobic001G504400 Sobic004G353100 Sobic004G353100 Sobic008G074000--Sobic004G353100 Sobic009G170200 Sobic009G170200 Sobic008G074000--Sobic009G170200 Sobic008G074000--Sobic009G219100 Sobic003G306600--Sobic008G074000 Sobic003G179350 Sobic003G179350 Sobic003G306600--Sobic003G179350 Sobic003G306600--Sobic009G219100 Sobic003G306600--Sobic009G062400 Sobic010G171600 Sobic010G171600 Sobic003G306600--Sobic010G171600 Sobic003G306600--Sobic004G268300 Sobic008G006100 Sobic008G006100 Sobic003G306600--Sobic008G006100 Sobic006G168650 Sobic006G168650 Sobic003G306600--Sobic006G168650 Sobic003G203300 Sobic003G203300 Sobic003G306600--Sobic003G203300 Sobic001G504400--Sobic002G206300 Sobic001G504400--Sobic007G103400 Sobic001G504400--Sobic009G038701 Sobic003G185900 Sobic003G185900 Sobic001G504400--Sobic003G185900 Sobic001G504400--Sobic001G258200 Sobic010G125833 Sobic010G125833 Sobic001G504400--Sobic010G125833 Sobic001G504400--Sobic008G033000 Sobic001G504400--Sobic001G180200 Sobic001G504400--Sobic001G378100 Sobic001G540600--Sobic001G378100 Sobic001G540600--Sobic001G217900 Sobic001G077300 Sobic001G077300 Sobic001G540600--Sobic001G077300 Sobic001G540600--Sobic009G170200 Sobic001G540600--Sobic002G206300 Sobic001G540600--Sobic010G231300 Sobic004G179400 Sobic004G179400 Sobic001G540600--Sobic004G179400 Sobic001G540600--Sobic009G207900 Sobic003G073800 Sobic003G073800 Sobic001G540600--Sobic003G073800
Octagon: transcription factors


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