Gene annotation
Transcriptome id Sobic.009G113800.1,Sobic.009G113800.2
Synonym BGLU11, Sb09g018160
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
Os5bglu20 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed
UniProt C5YWW3 , A0A1Z5R351
Pfam PF00232
Panther DB PTHR10353 PTHR10353:SF75
NCBI CDD KOG0626; Beta-glucosidase, lactase phlorizinhydrolase, and related proteins
KEGG Orthology K01188; beta-glucosidase
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT1G02850 : beta glucosidase 11
RAP-DB (Rice) LOC_Os05g30280.3 : Os5bglu20 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.009G113800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G207800 Plastid-lipid associated protein PAP / fibrillin family protein(PubMedID : 26465154)@PAP fibrillin family domain containing protein, expressed -
2 Sobic.007G140800 Fatty acid desaturase 6 (omega-6 fatty acid desaturase) FAD6 (At)(PubMedID : 27208977)@omega-6 fatty acid desaturase, chloroplast precursor, putative, expressed K10255: FAD6, acyl-lipid omega-6 desaturase (Delta-12 desaturase)
3 Sobic.001G102800 expressed protein -
4 Sobic.004G274100 expressed protein -
5 Sobic.002G193800 transporter family protein, putative, expressed -
6 Sobic.004G331700 aspartate aminotransferase 5(PubMedID : 26465154)@-(PubMedID : 26976818)@aminotransferase, classes I and II, domain containing protein, expressed K00811: aspartate aminotransferase, chloroplastic
7 Sobic.003G303700 Protein thylakoid membrane phosphoprotein 14 kda (Os)(PubMedID : 27208977)@expressed protein -
8 Sobic.009G237100 -(PubMedID : 26976818)@bile acid sodium symporter, putative, expressed K14347: SLC10A7, solute carrier family 10 (sodium/bile acid cotransporter), member 7
9 Sobic.007G009200 adenosine monophosphate kinase(PubMedID : 26465154)@AMP kinase(PubMedID : 26976818)@adenylate kinase, putative, expressed K00939: adk, adenylate kinase
10 Sobic.010G153900 Spermidine synthase(PubMedID : 27325899)@Up-regulated by silicon application under drought stress(PubMedID : 24813726)@"OsSPMS1(Ortholog in rice:Tao et al., 2018)"(PubMedID : 31659935)@spermidine synthase, putative, expressed K00797: speE, SRM, spermidine synthase
11 Sobic.010G201700 GA16396-PA, putative, expressed -
12 Sobic.008G188600 glyoxalase family protein, putative, expressed -
13 Sobic.009G043000 thioredoxin, putative, expressed -
14 Sobic.001G100000 glucose-1-phosphate adenylyltransferase large subunit, putative, expressed K00975: glucose-1-phosphate adenylyltransferase
15 Sobic.001G129000 DnaK family protein, putative, expressed -
16 Sobic.001G329400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF1230 domain containing protein, expressed -
17 Sobic.009G059300 haloacid dehalogenase-like hydrolase family protein, putative, expressed -
18 Sobic.008G021300 Unnamed(PubMedID : 24676859)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@FHA domain containing protein, putative, expressed -
19 Sobic.003G024300 glutathione gamma-glutamylcysteinyltransferase 1, putative, expressed K05941: glutathione gamma-glutamylcysteinyltransferase
20 Sobic.002G036000 -(PubMedID : 26976818)@hydroxyacid oxidase 1, putative, expressed K11517: (S)-2-hydroxy-acid oxidase


Gene co-expression network
sample Sobic009G113800 Sobic009G113800 Sobic006G207800 Sobic006G207800 Sobic009G113800--Sobic006G207800 Sobic007G140800 Sobic007G140800 Sobic009G113800--Sobic007G140800 Sobic001G102800 Sobic001G102800 Sobic009G113800--Sobic001G102800 Sobic004G274100 Sobic004G274100 Sobic009G113800--Sobic004G274100 Sobic002G193800 Sobic002G193800 Sobic009G113800--Sobic002G193800 Sobic004G331700 Sobic004G331700 Sobic009G113800--Sobic004G331700 Sobic003G303700 Sobic003G303700 Sobic009G113800--Sobic003G303700 Sobic009G237100 Sobic009G237100 Sobic009G113800--Sobic009G237100 Sobic007G009200 Sobic007G009200 Sobic009G113800--Sobic007G009200 Sobic006G207800--Sobic001G102800 Sobic006G207800--Sobic009G237100 Sobic006G207800--Sobic007G009200 Sobic003G387100 Sobic003G387100 Sobic006G207800--Sobic003G387100 Sobic009G043000 Sobic009G043000 Sobic006G207800--Sobic009G043000 Sobic010G035400 Sobic010G035400 Sobic006G207800--Sobic010G035400 Sobic003G431700 Sobic003G431700 Sobic006G207800--Sobic003G431700 Sobic010G201700 Sobic010G201700 Sobic006G207800--Sobic010G201700 Sobic006G238200 Sobic006G238200 Sobic006G207800--Sobic006G238200 Sobic006G077400 Sobic006G077400 Sobic007G140800--Sobic006G077400 Sobic007G140800--Sobic003G303700 Sobic007G140800--Sobic010G201700 Sobic003G024300 Sobic003G024300 Sobic007G140800--Sobic003G024300 Sobic010G153900 Sobic010G153900 Sobic007G140800--Sobic010G153900 Sobic001G329400 Sobic001G329400 Sobic007G140800--Sobic001G329400 Sobic007G140800--Sobic007G009200 Sobic004G125700 Sobic004G125700 Sobic007G140800--Sobic004G125700 Sobic007G140800--Sobic009G237100 Sobic001G102800--Sobic006G207800 Sobic001G519800 Sobic001G519800 Sobic001G102800--Sobic001G519800 Sobic003G002300 Sobic003G002300 Sobic001G102800--Sobic003G002300 Sobic001G102800--Sobic010G201700 Sobic001G102800--Sobic009G043000 Sobic004G272100 Sobic004G272100 Sobic001G102800--Sobic004G272100 Sobic001G102800--Sobic007G009200 Sobic007G052400 Sobic007G052400 Sobic001G102800--Sobic007G052400 Sobic001G102800--Sobic003G431700 Sobic004G274100--Sobic007G140800 Sobic004G274100--Sobic003G303700 Sobic002G098800 Sobic002G098800 Sobic004G274100--Sobic002G098800 Sobic004G274100--Sobic009G113800 Sobic004G274100--Sobic001G102800 Sobic008G021300 Sobic008G021300 Sobic004G274100--Sobic008G021300 Sobic004G274100--Sobic010G201700 Sobic001G069000 Sobic001G069000 Sobic004G274100--Sobic001G069000 Sobic008G188600 Sobic008G188600 Sobic004G274100--Sobic008G188600 Sobic002G193800--Sobic009G113800 Sobic002G193800--Sobic006G207800 Sobic004G054400 Sobic004G054400 Sobic002G193800--Sobic004G054400 Sobic002G193800--Sobic004G274100 Sobic002G193800--Sobic004G331700 Sobic001G333500 Sobic001G333500 Sobic002G193800--Sobic001G333500 Sobic001G168250 Sobic001G168250 Sobic002G193800--Sobic001G168250 Sobic002G193800--Sobic009G237100 Sobic002G193800--Sobic007G140800 Sobic004G331700--Sobic001G102800 Sobic004G331700--Sobic006G207800 Sobic001G309300 Sobic001G309300 Sobic004G331700--Sobic001G309300 Sobic004G331700--Sobic009G237100 Sobic004G331700--Sobic007G052400 Sobic004G331700--Sobic007G009200 Sobic010G005500 Sobic010G005500 Sobic004G331700--Sobic010G005500 Sobic004G331700--Sobic003G387100 Sobic009G059300 Sobic009G059300 Sobic004G331700--Sobic009G059300 Sobic003G303700--Sobic008G021300 Sobic003G303700--Sobic010G201700 Sobic003G303700--Sobic007G140800 Sobic002G152700 Sobic002G152700 Sobic003G303700--Sobic002G152700 Sobic003G303700--Sobic009G043000 Sobic003G303700--Sobic001G102800 Sobic003G303700--Sobic004G272100 Sobic003G303700--Sobic004G274100 Sobic003G303700--Sobic010G153900 Sobic009G237100--Sobic007G009200 Sobic009G237100--Sobic006G207800 Sobic009G237100--Sobic006G238200 Sobic001G100000 Sobic001G100000 Sobic009G237100--Sobic001G100000 Sobic001G491000 Sobic001G491000 Sobic009G237100--Sobic001G491000 Sobic002G275300 Sobic002G275300 Sobic009G237100--Sobic002G275300 Sobic009G237100--Sobic010G035400 Sobic009G237100--Sobic001G102800 Sobic010G181300 Sobic010G181300 Sobic009G237100--Sobic010G181300 Sobic007G009200--Sobic009G237100 Sobic007G009200--Sobic003G024300 Sobic007G009200--Sobic006G207800 Sobic003G398800 Sobic003G398800 Sobic007G009200--Sobic003G398800 Sobic007G009200--Sobic006G238200 Sobic007G009200--Sobic001G102800 Sobic007G009200--Sobic006G077400 Sobic007G009200--Sobic010G201700 Sobic007G009200--Sobic010G035400
Octagon: transcription factors


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