Gene annotation
Transcriptome id Sobic.002G421300.2
Synonym Sb02g043260
Functional annotation stress responsive protein, putative, expressed
UniProt A0A1B6QGF1
Pfam PF14200
Panther DB PTHR31257 PTHR31257:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G39050 : hydroxyproline-rich glycoprotein family protein
RAP-DB (Rice) LOC_Os07g48500.1 : stress responsive protein, putative, expressed
MaizeGDB (Corn) Zm00025a049190 , Zm00025a049191 , Zm00025a049189 , Zm00025a002286
Brachypodium KQK21868 , KQK02752 , KQK14587 , KQK14588
Barley HORVU2Hr1G017450.13 , HORVU2Hr1G017450.11 , HORVU2Hr1G017450.10 , HORVU2Hr1G017440.11 , HORVU2Hr1G017450.9 , HORVU2Hr1G017450.8 , HORVU2Hr1G017450.3 , HORVU2Hr1G017450.2 , HORVU2Hr1G017450.1 , HORVU2Hr1G017450.6 , HORVU2Hr1G017440.10 , HORVU2Hr1G017450.4 , HORVU2Hr1G017420.4 , HORVU2Hr1G017420.2 , HORVU2Hr1G017420.3 , HORVU2Hr1G017420.1 , HORVU2Hr1G017440.8 , HORVU2Hr1G017440.9 , HORVU2Hr1G017440.4 , HORVU2Hr1G017440.5 , HORVU2Hr1G017440.6 , HORVU2Hr1G017440.7 , HORVU2Hr1G017440.1 , HORVU2Hr1G017440.2 , HORVU2Hr1G017440.3
Wheat TraesCS2A02G101700 , TraesCS4D02G175900 , TraesCS4D02G175900 , TraesCS4D02G175900 , TraesCS2D02G101000 , TraesCS2B02G118800 , TraesCS2B02G118900 , TraesCS2A02G101700 , TraesCS2B02G118900 , TraesCS2A02G101600 , TraesCS2B02G118700 , TraesCS4B02G173700 , TraesCS4B02G173700 , TraesCS4B02G173700 , TraesCS2A02G101800 , TraesCS4A02G130800 , TraesCS2D02G101100 , TraesCS4A02G130800 , TraesCS2D02G101200 , TraesCS4A02G130800 , TraesCS2B02G118800 , TraesCS2D02G101100
Populus -


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cDNA sequences
Sobic.002G421300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G241900 expressed protein -
2 Sobic.010G153900 Spermidine synthase(PubMedID : 27325899)@Up-regulated by silicon application under drought stress(PubMedID : 24813726)@"OsSPMS1(Ortholog in rice:Tao et al., 2018)"(PubMedID : 31659935)@spermidine synthase, putative, expressed K00797: speE, SRM, spermidine synthase
3 Sobic.004G026300 heat shock protein 18.2(PubMedID : 26465154)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
4 Sobic.008G108400 expressed protein -
5 Sobic.003G303700 Protein thylakoid membrane phosphoprotein 14 kda (Os)(PubMedID : 27208977)@expressed protein -
6 Sobic.003G199800 expressed protein -
7 Sobic.009G043000 thioredoxin, putative, expressed -
8 Sobic.003G131000 expressed protein -
9 Sobic.002G098800 peroxiredoxin, putative, expressed -
10 Sobic.004G283100 -(PubMedID : 26465154)@expressed protein -
11 Sobic.006G147300 -(PubMedID : 26465154)@expressed protein -
12 Sobic.010G095000 kinase, pfkB family, putative, expressed K00847: E2.7.1.4, fructokinase
13 Sobic.004G035500 -(PubMedID : 26976818)@Involved in photorespiratory pathway(PubMedID : 12887583)@dicarboxylate transporter 3(PubMedID : 27016024)@citrate transporter, putative, expressed K03319: divalent anion:Na+ symporter, DASS family
14 Sobic.009G244300 down-regulated TF in developmental senescence(PubMedID : 27586543)@MYB family transcription factor, putative, expressed -
15 Sobic.001G111700 alpha/beta-Hydrolases superfamily protein(PubMedID : 26465154)@alpha/beta-Hydrolases superfamily protein(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydrolase, alpha/beta fold family domain containing protein, expressed -
16 Sobic.003G359100 sedoheptulose-bisphosphatase(PubMedID : 26465154)@fructose-1,6-bisphosphatase, putative, expressed K01100: sedoheptulose-bisphosphatase
17 Sobic.003G234400 CA(PubMedID : 19549309)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@carbonic anhydrase(PubMedID : 26904072)@-(PubMedID : 26976818)@carbonic anhydrase, chloroplast precursor, putative, expressed K01673: cynT, carbonic anhydrase
18 Sobic.010G201700 GA16396-PA, putative, expressed -
19 Sobic.001G076900 Uncharacterised protein family (UPF0497)(PubMedID : 26465154)@membrane associated DUF588 domain containing protein, putative, expressed -
20 Sobic.007G034300 expressed protein -


Gene co-expression network
sample Sobic002G421300 Sobic002G421300 Sobic003G241900 Sobic003G241900 Sobic002G421300--Sobic003G241900 Sobic010G153900 Sobic010G153900 Sobic002G421300--Sobic010G153900 Sobic004G026300 Sobic004G026300 Sobic002G421300--Sobic004G026300 Sobic008G108400 Sobic008G108400 Sobic002G421300--Sobic008G108400 Sobic003G303700 Sobic003G303700 Sobic002G421300--Sobic003G303700 Sobic003G199800 Sobic003G199800 Sobic002G421300--Sobic003G199800 Sobic009G043000 Sobic009G043000 Sobic002G421300--Sobic009G043000 Sobic003G131000 Sobic003G131000 Sobic002G421300--Sobic003G131000 Sobic002G098800 Sobic002G098800 Sobic002G421300--Sobic002G098800 Sobic009G244300 Sobic009G244300 Sobic003G241900--Sobic009G244300 Sobic003G241900--Sobic010G153900 Sobic003G241900--Sobic002G421300 Sobic004G267000 Sobic004G267000 Sobic003G241900--Sobic004G267000 Sobic003G231800 Sobic003G231800 Sobic003G241900--Sobic003G231800 Sobic007G034300 Sobic007G034300 Sobic003G241900--Sobic007G034300 Sobic004G305800 Sobic004G305800 Sobic003G241900--Sobic004G305800 Sobic001G076900 Sobic001G076900 Sobic003G241900--Sobic001G076900 Sobic010G201700 Sobic010G201700 Sobic003G241900--Sobic010G201700 Sobic007G140800 Sobic007G140800 Sobic010G153900--Sobic007G140800 Sobic008G188600 Sobic008G188600 Sobic010G153900--Sobic008G188600 Sobic010G153900--Sobic009G043000 Sobic010G153900--Sobic010G201700 Sobic010G153900--Sobic003G303700 Sobic010G095000 Sobic010G095000 Sobic010G153900--Sobic010G095000 Sobic006G207800 Sobic006G207800 Sobic010G153900--Sobic006G207800 Sobic010G153900--Sobic003G241900 Sobic001G020100 Sobic001G020100 Sobic010G153900--Sobic001G020100 Sobic004G026300--Sobic003G131000 Sobic010G276400 Sobic010G276400 Sobic004G026300--Sobic010G276400 Sobic004G026300--Sobic003G199800 Sobic003G234400 Sobic003G234400 Sobic004G026300--Sobic003G234400 Sobic010G038500 Sobic010G038500 Sobic004G026300--Sobic010G038500 Sobic001G111700 Sobic001G111700 Sobic004G026300--Sobic001G111700 Sobic001G068400 Sobic001G068400 Sobic004G026300--Sobic001G068400 Sobic002G040100 Sobic002G040100 Sobic004G026300--Sobic002G040100 Sobic003G069100 Sobic003G069100 Sobic004G026300--Sobic003G069100 Sobic008G108400--Sobic010G153900 Sobic008G108400--Sobic002G421300 Sobic008G108400--Sobic001G111700 Sobic009G113800 Sobic009G113800 Sobic008G108400--Sobic009G113800 Sobic008G108400--Sobic003G241900 Sobic008G108400--Sobic004G026300 Sobic009G054900 Sobic009G054900 Sobic008G108400--Sobic009G054900 Sobic008G108400--Sobic007G140800 Sobic008G115900 Sobic008G115900 Sobic008G108400--Sobic008G115900 Sobic008G021300 Sobic008G021300 Sobic003G303700--Sobic008G021300 Sobic003G303700--Sobic010G201700 Sobic003G303700--Sobic007G140800 Sobic002G152700 Sobic002G152700 Sobic003G303700--Sobic002G152700 Sobic003G303700--Sobic009G043000 Sobic001G102800 Sobic001G102800 Sobic003G303700--Sobic001G102800 Sobic004G272100 Sobic004G272100 Sobic003G303700--Sobic004G272100 Sobic004G274100 Sobic004G274100 Sobic003G303700--Sobic004G274100 Sobic003G303700--Sobic010G153900 Sobic003G199800--Sobic002G040100 Sobic003G199800--Sobic010G276400 Sobic002G000500 Sobic002G000500 Sobic003G199800--Sobic002G000500 Sobic010G183100 Sobic010G183100 Sobic003G199800--Sobic010G183100 Sobic004G035500 Sobic004G035500 Sobic003G199800--Sobic004G035500 Sobic008G038300 Sobic008G038300 Sobic003G199800--Sobic008G038300 Sobic010G109500 Sobic010G109500 Sobic003G199800--Sobic010G109500 Sobic007G189700 Sobic007G189700 Sobic003G199800--Sobic007G189700 Sobic009G191300 Sobic009G191300 Sobic003G199800--Sobic009G191300 Sobic009G043000--Sobic010G201700 Sobic003G002300 Sobic003G002300 Sobic009G043000--Sobic003G002300 Sobic008G102000 Sobic008G102000 Sobic009G043000--Sobic008G102000 Sobic009G043000--Sobic001G102800 Sobic007G225500 Sobic007G225500 Sobic009G043000--Sobic007G225500 Sobic009G043000--Sobic004G272100 Sobic009G043000--Sobic006G207800 Sobic009G140600 Sobic009G140600 Sobic009G043000--Sobic009G140600 Sobic001G519800 Sobic001G519800 Sobic009G043000--Sobic001G519800 Sobic003G131000--Sobic004G026300 Sobic001G198800 Sobic001G198800 Sobic003G131000--Sobic001G198800 Sobic003G131000--Sobic010G276400 Sobic003G131000--Sobic010G038500 Sobic003G131000--Sobic002G040100 Sobic003G131000--Sobic010G109500 Sobic003G057900 Sobic003G057900 Sobic003G131000--Sobic003G057900 Sobic003G131000--Sobic003G199800 Sobic003G131000--Sobic001G068400 Sobic001G069000 Sobic001G069000 Sobic002G098800--Sobic001G069000 Sobic004G308700 Sobic004G308700 Sobic002G098800--Sobic004G308700 Sobic002G098800--Sobic008G021300 Sobic002G098800--Sobic004G272100 Sobic008G066100 Sobic008G066100 Sobic002G098800--Sobic008G066100 Sobic002G098800--Sobic004G035500 Sobic002G098800--Sobic010G201700 Sobic002G098800--Sobic003G303700 Sobic002G098800--Sobic004G274100
Octagon: transcription factors


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