Gene annotation
Transcriptome id Sobic.001G132300.1
Synonym Sb01g011600
Functional annotation NB-ARC domain containing protein, expressed
UniProt C5WPI2
Pfam PF00931
Panther DB PTHR23155 PTHR23155:SF550
NCBI CDD KOG4658; Apoptotic ATPase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G14470 : NB-ARC domain-containing disease resistance protein
RAP-DB (Rice) LOC_Os05g12770.1 : NB-ARC domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS3D02G528100 , TraesCS3D02G528100 , TraesCS3B02G590800 , TraesCS3B02G590600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G173000 disease resistance protein RGA2, putative, expressed -
2 Sobic.005G039500 signal recognition particle 54 kDa protein, putative, expressed K03106: SRP54, signal recognition particle subunit SRP54
3 Sobic.003G325200 disease resistance protein, putative, expressed -
4 Sobic.003G254000 PPR repeat domain containing protein, putative, expressed -
5 Sobic.009G127900 - -
6 Sobic.008G026900 rp1, putative, expressed -
7 Sobic.001G035900 expressed protein K13156: U11/U12 small nuclear ribonucleoprotein 48 kDa protein
8 Sobic.009G140500 no apical meristem protein, putative, expressed -
9 Sobic.001G318432 - -
10 Sobic.005G225800 white-brown complex homolog protein 11, putative, expressed -
11 Sobic.001G274200 RNA recognition motif containing protein, putative, expressed K11093: U1 small nuclear ribonucleoprotein 70kDa
12 Sobic.001G214300 expressed protein -
13 Sobic.007G178700 - -
14 Sobic.009G212700 ras-related protein, putative, expressed K07897: Ras-related protein Rab-7A
15 Sobic.003G429650 - -
16 Sobic.007G037900 oxidoreductase family, NAD-binding Rossmann fold containing protein, expressed -
17 Sobic.004G290800 GRAS family transcription factor(PubMedID : 23915383)@scarecrow, putative, expressed -
18 Sobic.003G113200 5-nucleotidase domain-containing protein, putative, expressed -
19 Sobic.002G006600 -(PubMedID : 26976818)@aminotransferase, classes I and II, domain containing protein, expressed K14272: glutamate--glyoxylate aminotransferase
20 Sobic.001G111900 - -


Gene co-expression network
sample Sobic001G132300 Sobic001G132300 Sobic002G173000 Sobic002G173000 Sobic001G132300--Sobic002G173000 Sobic005G039500 Sobic005G039500 Sobic001G132300--Sobic005G039500 Sobic003G325200 Sobic003G325200 Sobic001G132300--Sobic003G325200 Sobic003G254000 Sobic003G254000 Sobic001G132300--Sobic003G254000 Sobic009G127900 Sobic009G127900 Sobic001G132300--Sobic009G127900 Sobic008G026900 Sobic008G026900 Sobic001G132300--Sobic008G026900 Sobic001G035900 Sobic001G035900 Sobic001G132300--Sobic001G035900 Sobic009G140500 Sobic009G140500 Sobic001G132300--Sobic009G140500 Sobic001G318432 Sobic001G318432 Sobic001G132300--Sobic001G318432 Sobic006G182900 Sobic006G182900 Sobic002G173000--Sobic006G182900 Sobic001G214300 Sobic001G214300 Sobic002G173000--Sobic001G214300 Sobic005G032800 Sobic005G032800 Sobic002G173000--Sobic005G032800 Sobic006G021250 Sobic006G021250 Sobic002G173000--Sobic006G021250 Sobic010G248700 Sobic010G248700 Sobic002G173000--Sobic010G248700 Sobic008G027000 Sobic008G027000 Sobic002G173000--Sobic008G027000 Sobic001G287201 Sobic001G287201 Sobic002G173000--Sobic001G287201 Sobic002G173000--Sobic001G318432 Sobic001G474600 Sobic001G474600 Sobic002G173000--Sobic001G474600 Sobic005G039500--Sobic003G254000 Sobic001G067850 Sobic001G067850 Sobic005G039500--Sobic001G067850 Sobic003G113200 Sobic003G113200 Sobic005G039500--Sobic003G113200 Sobic001G261573 Sobic001G261573 Sobic005G039500--Sobic001G261573 Sobic003G429650 Sobic003G429650 Sobic005G039500--Sobic003G429650 Sobic009G212700 Sobic009G212700 Sobic005G039500--Sobic009G212700 Sobic002G243900 Sobic002G243900 Sobic005G039500--Sobic002G243900 Sobic004G035000 Sobic004G035000 Sobic005G039500--Sobic004G035000 Sobic007G037900 Sobic007G037900 Sobic005G039500--Sobic007G037900 Sobic003G325200--Sobic001G132300 Sobic003G325200--Sobic005G039500 Sobic003G325200--Sobic009G212700 Sobic006G246900 Sobic006G246900 Sobic003G325200--Sobic006G246900 Sobic005G225800 Sobic005G225800 Sobic003G325200--Sobic005G225800 Sobic003G325200--Sobic003G254000 Sobic003G259901 Sobic003G259901 Sobic003G325200--Sobic003G259901 Sobic003G325200--Sobic007G037900 Sobic007G054000 Sobic007G054000 Sobic003G325200--Sobic007G054000 Sobic003G254000--Sobic001G035900 Sobic003G254000--Sobic001G261573 Sobic003G254000--Sobic004G035000 Sobic002G031400 Sobic002G031400 Sobic003G254000--Sobic002G031400 Sobic003G254000--Sobic005G039500 Sobic002G064750 Sobic002G064750 Sobic003G254000--Sobic002G064750 Sobic001G274200 Sobic001G274200 Sobic003G254000--Sobic001G274200 Sobic007G099100 Sobic007G099100 Sobic003G254000--Sobic007G099100 Sobic003G254000--Sobic003G429650 Sobic007G178700 Sobic007G178700 Sobic009G127900--Sobic007G178700 Sobic003G268300 Sobic003G268300 Sobic009G127900--Sobic003G268300 Sobic001G446900 Sobic001G446900 Sobic009G127900--Sobic001G446900 Sobic006G066650 Sobic006G066650 Sobic009G127900--Sobic006G066650 Sobic004G290800 Sobic004G290800 Sobic009G127900--Sobic004G290800 Sobic010G026400 Sobic010G026400 Sobic009G127900--Sobic010G026400 Sobic009G127900--Sobic007G037900 Sobic008G173900 Sobic008G173900 Sobic009G127900--Sobic008G173900 Sobic001G111900 Sobic001G111900 Sobic009G127900--Sobic001G111900 Sobic008G026900--Sobic008G027000 Sobic009G161600 Sobic009G161600 Sobic008G026900--Sobic009G161600 Sobic008G026900--Sobic001G111900 Sobic008G026900--Sobic002G173000 Sobic008G026900--Sobic001G132300 Sobic008G026900--Sobic003G113200 Sobic008G026900--Sobic007G178700 Sobic008G026900--Sobic009G127900 Sobic008G026900--Sobic001G446900 Sobic001G035900--Sobic003G254000 Sobic001G035900--Sobic002G031400 Sobic001G035900--Sobic002G064750 Sobic001G035900--Sobic007G099100 Sobic001G035900--Sobic001G274200 Sobic001G035900--Sobic003G429650 Sobic010G176550 Sobic010G176550 Sobic001G035900--Sobic010G176550 Sobic007G161000 Sobic007G161000 Sobic001G035900--Sobic007G161000 Sobic009G024000 Sobic009G024000 Sobic001G035900--Sobic009G024000 Sobic009G140500--Sobic001G274200 Sobic009G140500--Sobic001G067850 Sobic010G123901 Sobic010G123901 Sobic009G140500--Sobic010G123901 Sobic009G140500--Sobic007G037900 Sobic009G140500--Sobic004G290800 Sobic001G420200 Sobic001G420200 Sobic009G140500--Sobic001G420200 Sobic003G179201 Sobic003G179201 Sobic009G140500--Sobic003G179201 Sobic002G203200 Sobic002G203200 Sobic009G140500--Sobic002G203200 Sobic007G096600 Sobic007G096600 Sobic009G140500--Sobic007G096600 Sobic001G318432--Sobic001G214300 Sobic006G048600 Sobic006G048600 Sobic001G318432--Sobic006G048600 Sobic003G029700 Sobic003G029700 Sobic001G318432--Sobic003G029700 Sobic006G228500 Sobic006G228500 Sobic001G318432--Sobic006G228500 Sobic004G341900 Sobic004G341900 Sobic001G318432--Sobic004G341900 Sobic006G048500 Sobic006G048500 Sobic001G318432--Sobic006G048500 Sobic001G318432--Sobic003G429650 Sobic002G006900 Sobic002G006900 Sobic001G318432--Sobic002G006900 Sobic001G318432--Sobic006G182900
Octagon: transcription factors


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